RNA–Protein interactions for RNA: ENST00000508075.1

NEDD4-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 965 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-207ENST00000508075 SMIM3Q9BZL3 60 aa10.03□□□□□ -0.8
NEDD4-207ENST00000508075 RNF24Q9Y225 148 aa10.03□□□□□ -0.8
NEDD4-207ENST00000508075 NBDYA0A0U1RRE5 68 aa10.02□□□□□ -0.81
NEDD4-207ENST00000508075 C7orf71A4D174 169 aa10.02□□□□□ -0.81
NEDD4-207ENST00000508075 RLN2P04090 185 aa10.02□□□□□ -0.81
NEDD4-207ENST00000508075 HIST1H1EP10412 219 aaKnown RBP10.02□□□□□ -0.81
NEDD4-207ENST00000508075 GUK1Q16774 197 aa10.02□□□□□ -0.81
NEDD4-207ENST00000508075 ATP6V1FQ16864 119 aa10.02□□□□□ -0.81
NEDD4-207ENST00000508075 Q8TAT8 98 aa10.02□□□□□ -0.81
NEDD4-207ENST00000508075 GNPNAT1Q96EK6 184 aaPredicted RBP10.02□□□□□ -0.81
NEDD4-207ENST00000508075 PHYHIPLQ96FC7 376 aa10.02□□□□□ -0.81
NEDD4-207ENST00000508075 KRTAP1-5Q9BYS1 174 aa10.02□□□□□ -0.81
NEDD4-207ENST00000508075 KLF12Q9Y4X4 402 aa10.02□□□□□ -0.81
NEDD4-207ENST00000508075 INMT-MINDY4F8WBC2 141 aa10.01□□□□□ -0.81
NEDD4-207ENST00000508075 IGHV3-53P01767 116 aa10.01□□□□□ -0.81
NEDD4-207ENST00000508075 H2BFSP57053 126 aa10.01□□□□□ -0.81
NEDD4-207ENST00000508075 LINC00612Q8N6U2 182 aa10.01□□□□□ -0.81
NEDD4-207ENST00000508075 S100ZQ8WXG8 99 aa10.01□□□□□ -0.81
NEDD4-207ENST00000508075 TMEM14CQ9P0S9 112 aa10.01□□□□□ -0.81
NEDD4-207ENST00000508075 CCL18P55774 89 aa10□□□□□ -0.81
NEDD4-207ENST00000508075 ESRGQ1W209 222 aa10□□□□□ -0.81
NEDD4-207ENST00000508075 C11orf72Q8NBR9 251 aa10□□□□□ -0.81
NEDD4-207ENST00000508075 C20orf144Q9BQM9 153 aa10□□□□□ -0.81
NEDD4-207ENST00000508075 KRTAP4-5Q9BYR2 181 aa10□□□□□ -0.81
NEDD4-207ENST00000508075 WDR61Q9GZS3 305 aaKnown RBP10□□□□□ -0.81
NEDD4-207ENST00000508075 MRPL16Q9NX20 251 aaKnown RBP10□□□□□ -0.81
NEDD4-207ENST00000508075 PKD1P98161 4303 aa10□□□□□ -0.81
NEDD4-207ENST00000508075 PKHD1P08F94 4074 aa9.99□□□□□ -0.81
NEDD4-207ENST00000508075 TRGV1A0A0A0MS02 117 aa9.99□□□□□ -0.81
NEDD4-207ENST00000508075 A6NHS1 94 aa9.99□□□□□ -0.81
NEDD4-207ENST00000508075 E5RGE8 158 aa9.99□□□□□ -0.81
NEDD4-207ENST00000508075 ZNF253O75346 499 aa9.99□□□□□ -0.81
NEDD4-207ENST00000508075 ZNF324O75467 553 aaPredicted RBP9.99□□□□□ -0.81
NEDD4-207ENST00000508075 SLC25A5P05141 298 aaKnown RBP9.99□□□□□ -0.81
NEDD4-207ENST00000508075 NBEAP1P0C6P0 100 aa9.99□□□□□ -0.81
NEDD4-207ENST00000508075 M6PRP20645 277 aa9.99□□□□□ -0.81
NEDD4-207ENST00000508075 SOHLH1Q5JUK2 328 aa9.99□□□□□ -0.81
NEDD4-207ENST00000508075 C6orf223Q8N319 242 aa9.99□□□□□ -0.81
NEDD4-207ENST00000508075 ZFAND2AQ8N6M9 145 aa9.99□□□□□ -0.81
NEDD4-207ENST00000508075 CHAC2Q8WUX2 184 aa9.99□□□□□ -0.81
NEDD4-207ENST00000508075 FXYD5Q96DB9 178 aa9.99□□□□□ -0.81
NEDD4-207ENST00000508075 ZNF503Q96F45 646 aa9.99□□□□□ -0.81
NEDD4-207ENST00000508075 FAM19A4Q96LR4 140 aa9.99□□□□□ -0.81
NEDD4-207ENST00000508075 PAXXQ9BUH6 204 aa9.99□□□□□ -0.81
NEDD4-207ENST00000508075 OR51M1Q9H341 326 aa9.99□□□□□ -0.81
NEDD4-207ENST00000508075 KLLNB2CW77 178 aa9.98□□□□□ -0.81
NEDD4-207ENST00000508075 OR7C2O60412 319 aa9.98□□□□□ -0.81
NEDD4-207ENST00000508075 GPX1P07203 203 aa9.98□□□□□ -0.81
NEDD4-207ENST00000508075 MUC21Q5SSG8 566 aa9.98□□□□□ -0.81
NEDD4-207ENST00000508075 RXFP4Q8TDU9 374 aa9.98□□□□□ -0.81
NEDD4-207ENST00000508075 PPP1R1CQ8WVI7 109 aa9.98□□□□□ -0.81
NEDD4-207ENST00000508075 MRPL53Q96EL3 112 aaKnown RBP9.98□□□□□ -0.81
NEDD4-207ENST00000508075 VSIG2Q96IQ7 327 aa9.98□□□□□ -0.81
NEDD4-207ENST00000508075 ODF3Q96PU9 254 aa9.98□□□□□ -0.81
NEDD4-207ENST00000508075 PYGO2Q9BRQ0 406 aa9.98□□□□□ -0.81
NEDD4-207ENST00000508075 NMES1Q9C002 83 aa9.98□□□□□ -0.81
NEDD4-207ENST00000508075 SLC25A31Q9H0C2 315 aa9.98□□□□□ -0.81
NEDD4-207ENST00000508075 AAMDCQ9H7C9 122 aa9.98□□□□□ -0.81
NEDD4-207ENST00000508075 RPH3ALQ9UNE2 315 aa9.98□□□□□ -0.81
NEDD4-207ENST00000508075 FUT9Q9Y231 359 aa9.98□□□□□ -0.81
NEDD4-207ENST00000508075 TRGV2A0A075B6R0 118 aa9.97□□□□□ -0.81
NEDD4-207ENST00000508075 A0A096LPF7 62 aa9.97□□□□□ -0.81
NEDD4-207ENST00000508075 SSNA1O43805 119 aa9.97□□□□□ -0.81
NEDD4-207ENST00000508075 MED14OSP0DP75 135 aa9.97□□□□□ -0.81
NEDD4-207ENST00000508075 RANP62826 216 aaKnown RBP9.97□□□□□ -0.81
NEDD4-207ENST00000508075 FFAR4Q5NUL3 377 aa9.97□□□□□ -0.81
NEDD4-207ENST00000508075 LINC00477Q96M19 166 aa9.97□□□□□ -0.81
NEDD4-207ENST00000508075 Q9H8V8 135 aa9.97□□□□□ -0.81
NEDD4-207ENST00000508075 WFDC1Q9HC57 220 aa9.97□□□□□ -0.81
NEDD4-207ENST00000508075 DYNC1H1Q14204 4646 aaKnown RBP9.96□□□□□ -0.81
NEDD4-207ENST00000508075 RGS13O14921 159 aa9.96□□□□□ -0.82
NEDD4-207ENST00000508075 MPDU1O75352 247 aa9.96□□□□□ -0.82
NEDD4-207ENST00000508075 FUSP35637 526 aaKnown RBP eCLIP9.96□□□□□ -0.82
NEDD4-207ENST00000508075 TMEM78Q5T7P6 136 aa9.96□□□□□ -0.82
NEDD4-207ENST00000508075 C9orf47Q6ZRZ4 202 aa9.96□□□□□ -0.82
NEDD4-207ENST00000508075 EIF4E3Q8N5X7 224 aaKnown RBP9.96□□□□□ -0.82
NEDD4-207ENST00000508075 PRELID1Q9Y255 219 aa9.96□□□□□ -0.82
NEDD4-207ENST00000508075 HSPB11Q9Y547 144 aa9.96□□□□□ -0.82
NEDD4-207ENST00000508075 HMGB3O15347 200 aaKnown RBP9.95□□□□□ -0.82
NEDD4-207ENST00000508075 MPC2O95563 127 aa9.95□□□□□ -0.82
NEDD4-207ENST00000508075 FAM3BP58499 235 aaPredicted RBP9.95□□□□□ -0.82
NEDD4-207ENST00000508075 DAZ2Q13117 558 aaKnown RBP9.95□□□□□ -0.82
NEDD4-207ENST00000508075 PDE6HQ13956 83 aa9.95□□□□□ -0.82
NEDD4-207ENST00000508075 HYLS1Q96M11 299 aa9.95□□□□□ -0.82
NEDD4-207ENST00000508075 ATP5SQ99766 215 aa9.95□□□□□ -0.82
NEDD4-207ENST00000508075 Q9H3A6 140 aa9.95□□□□□ -0.82
NEDD4-207ENST00000508075 PTTG2Q9NZH5 202 aa9.95□□□□□ -0.82
NEDD4-207ENST00000508075 ZNF492Q9P255 531 aa9.95□□□□□ -0.82
NEDD4-207ENST00000508075 MBD2Q9UBB5 411 aa9.95□□□□□ -0.82
NEDD4-207ENST00000508075 IGHV1OR15-1A0A075B7D0 117 aa9.94□□□□□ -0.82
NEDD4-207ENST00000508075 C16orf90A8MZG2 172 aa9.94□□□□□ -0.82
NEDD4-207ENST00000508075 PRAF2O60831 178 aa9.94□□□□□ -0.82
NEDD4-207ENST00000508075 CRISP2P16562 243 aa9.94□□□□□ -0.82
NEDD4-207ENST00000508075 UBE2L3P68036 154 aaKnown RBP9.94□□□□□ -0.82
NEDD4-207ENST00000508075 LINC00299Q6ZSB3 139 aa9.94□□□□□ -0.82
NEDD4-207ENST00000508075 MARVELD1Q9BSK0 173 aa9.94□□□□□ -0.82
NEDD4-207ENST00000508075 DNAH11Q96DT5 4516 aa9.93□□□□□ -0.82
NEDD4-207ENST00000508075 SPINK4O60575 86 aa9.93□□□□□ -0.82
NEDD4-207ENST00000508075 SFTA3P0C7M3 94 aa9.93□□□□□ -0.82
NEDD4-207ENST00000508075 RPL12P30050 165 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms