RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ZNF80P51504 273 aaPredicted RBP11.21□□□□□ -0.61
DDX41-208ENST00000507955 LCNL1Q6ZST4 164 aa11.21□□□□□ -0.61
DDX41-208ENST00000507955 ZFAND3Q9H8U3 227 aa11.21□□□□□ -0.61
DDX41-208ENST00000507955 RNF24Q9Y225 148 aa11.21□□□□□ -0.61
DDX41-208ENST00000507955 PTPN13Q12923 2485 aa11.21□□□□□ -0.61
DDX41-208ENST00000507955 C20orf202A1L168 122 aa11.21□□□□□ -0.62
DDX41-208ENST00000507955 RPL7P18124 248 aaKnown RBP11.21□□□□□ -0.62
DDX41-208ENST00000507955 RELQ04864 619 aaPredicted RBP11.21□□□□□ -0.62
DDX41-208ENST00000507955 Q6ZS46 218 aa11.21□□□□□ -0.62
DDX41-208ENST00000507955 TIMM8BQ9Y5J9 83 aaPredicted RBP11.21□□□□□ -0.62
DDX41-208ENST00000507955 CLPSL1A2RUU4 121 aa11.2□□□□□ -0.62
DDX41-208ENST00000507955 FAM231BA6NCW3 169 aa11.2□□□□□ -0.62
DDX41-208ENST00000507955 CUBNO60494 3623 aa11.2□□□□□ -0.62
DDX41-208ENST00000507955 IGHV1-69DA0A0B4J2H0 117 aa11.2□□□□□ -0.62
DDX41-208ENST00000507955 IGHV1-69P01742 117 aa11.2□□□□□ -0.62
DDX41-208ENST00000507955 CSN1S1P47710 185 aa11.2□□□□□ -0.62
DDX41-208ENST00000507955 C10orf105Q8TEF2 133 aa11.2□□□□□ -0.62
DDX41-208ENST00000507955 PIMREGQ9BSJ6 248 aa11.2□□□□□ -0.62
DDX41-208ENST00000507955 TRBV12-3P01733 135 aa11.19□□□□□ -0.62
DDX41-208ENST00000507955 PDE6HQ13956 83 aa11.19□□□□□ -0.62
DDX41-208ENST00000507955 ORAOV1Q8WV07 137 aa11.19□□□□□ -0.62
DDX41-208ENST00000507955 PMCHL2Q9BQD1 86 aa11.19□□□□□ -0.62
DDX41-208ENST00000507955 NBPF19A0A087WUL8 3843 aa11.19□□□□□ -0.62
DDX41-208ENST00000507955 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.19□□□□□ -0.62
DDX41-208ENST00000507955 TMEM213A2RRL7 107 aa11.19□□□□□ -0.62
DDX41-208ENST00000507955 H0Y8G0 127 aa11.19□□□□□ -0.62
DDX41-208ENST00000507955 BUB3O43684 328 aa11.19□□□□□ -0.62
DDX41-208ENST00000507955 SH2D1AO60880 128 aa11.19□□□□□ -0.62
DDX41-208ENST00000507955 AVPP01185 164 aa11.19□□□□□ -0.62
DDX41-208ENST00000507955 MAPK1IP1LQ8NDC0 245 aa11.19□□□□□ -0.62
DDX41-208ENST00000507955 COX11Q9Y6N1 276 aa11.19□□□□□ -0.62
DDX41-208ENST00000507955 DOPEY2Q9Y3R5 2298 aa11.19□□□□□ -0.62
DDX41-208ENST00000507955 ZNF469Q96JG9 3925 aaPredicted RBP11.19□□□□□ -0.62
DDX41-208ENST00000507955 A0A1B0GUT8 65 aa11.18□□□□□ -0.62
DDX41-208ENST00000507955 CT45A10P0DMU9 189 aa11.18□□□□□ -0.62
DDX41-208ENST00000507955 BLCAPP62952 87 aa11.18□□□□□ -0.62
DDX41-208ENST00000507955 PSG9Q00887 426 aa11.18□□□□□ -0.62
DDX41-208ENST00000507955 FAM162BQ5T6X4 162 aa11.18□□□□□ -0.62
DDX41-208ENST00000507955 PRR25Q96S07 402 aa11.18□□□□□ -0.62
DDX41-208ENST00000507955 TRBV6-1A0A0K0K1D8 114 aa11.17□□□□□ -0.62
DDX41-208ENST00000507955 FOXE3Q13461 319 aa11.17□□□□□ -0.62
DDX41-208ENST00000507955 MPV17L2Q567V2 206 aa11.17□□□□□ -0.62
DDX41-208ENST00000507955 LYZL1Q6UWQ5 148 aa11.17□□□□□ -0.62
DDX41-208ENST00000507955 ERASQ7Z444 233 aa11.17□□□□□ -0.62
DDX41-208ENST00000507955 TRAV41A0A0B4J266 112 aa11.17□□□□□ -0.62
DDX41-208ENST00000507955 H3BUX3 64 aa11.17□□□□□ -0.62
DDX41-208ENST00000507955 IGHV3-11P01762 117 aa11.17□□□□□ -0.62
DDX41-208ENST00000507955 FAM106AQ4KMX7 169 aa11.17□□□□□ -0.62
DDX41-208ENST00000507955 CLEC2AQ6UVW9 174 aa11.17□□□□□ -0.62
DDX41-208ENST00000507955 Q6ZQT7 251 aa11.17□□□□□ -0.62
DDX41-208ENST00000507955 ST20Q9HBF5 79 aa11.17□□□□□ -0.62
DDX41-208ENST00000507955 SERTM2A0A1B0GWG4 89 aa11.16□□□□□ -0.62
DDX41-208ENST00000507955 S100A7AQ86SG5 101 aa11.16□□□□□ -0.62
DDX41-208ENST00000507955 ZNF575Q86XF7 245 aa11.16□□□□□ -0.62
DDX41-208ENST00000507955 PPP1R14DQ9NXH3 145 aa11.16□□□□□ -0.62
DDX41-208ENST00000507955 MOB4Q9Y3A3 225 aa11.16□□□□□ -0.62
DDX41-208ENST00000507955 TEX15Q9BXT5 2789 aa11.15□□□□□ -0.62
DDX41-208ENST00000507955 TMEM189A5PLL7 270 aa11.15□□□□□ -0.62
DDX41-208ENST00000507955 GOSR1O95249 250 aa11.15□□□□□ -0.62
DDX41-208ENST00000507955 NCR2O95944 276 aa11.15□□□□□ -0.62
DDX41-208ENST00000507955 TRGV3P03979 118 aa11.15□□□□□ -0.62
DDX41-208ENST00000507955 PPIFP30405 207 aaKnown RBP11.15□□□□□ -0.62
DDX41-208ENST00000507955 PTTG1IPP53801 180 aa11.15□□□□□ -0.62
DDX41-208ENST00000507955 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.15□□□□□ -0.62
DDX41-208ENST00000507955 KLK15Q9H2R5 256 aa11.15□□□□□ -0.62
DDX41-208ENST00000507955 ATP5G2Q06055 141 aa11.15□□□□□ -0.62
DDX41-208ENST00000507955 UNQ9165/PRO28630Q6UXU0 137 aa11.15□□□□□ -0.62
DDX41-208ENST00000507955 EEF1AKMT3Q96AZ1 226 aa11.15□□□□□ -0.62
DDX41-208ENST00000507955 SCRT2Q9NQ03 307 aa11.15□□□□□ -0.62
DDX41-208ENST00000507955 A1L4Q6 167 aa11.14□□□□□ -0.63
DDX41-208ENST00000507955 DEFB1P60022 68 aa11.14□□□□□ -0.63
DDX41-208ENST00000507955 LOXL1Q08397 574 aaPredicted RBP11.14□□□□□ -0.63
DDX41-208ENST00000507955 IL17RELQ6ZVW7 336 aa11.14□□□□□ -0.63
DDX41-208ENST00000507955 GATD1Q8NB37 220 aa11.14□□□□□ -0.63
DDX41-208ENST00000507955 ZNF738Q8NE65 137 aa11.14□□□□□ -0.63
DDX41-208ENST00000507955 BBC3Q96PG8 261 aaPredicted RBP11.14□□□□□ -0.63
DDX41-208ENST00000507955 MAP1LC3CQ9BXW4 147 aa11.14□□□□□ -0.63
DDX41-208ENST00000507955 HIF1ANQ9NWT6 349 aa11.14□□□□□ -0.63
DDX41-208ENST00000507955 SCGB2A1O75556 95 aa11.14□□□□□ -0.63
DDX41-208ENST00000507955 OR5AL1P0C617 328 aa11.14□□□□□ -0.63
DDX41-208ENST00000507955 TMEM191AQ9H0A3 160 aa11.14□□□□□ -0.63
DDX41-208ENST00000507955 MSRB1Q9NZV6 116 aa11.14□□□□□ -0.63
DDX41-208ENST00000507955 A0A096LNJ9 63 aa11.13□□□□□ -0.63
DDX41-208ENST00000507955 FXYD7P58549 80 aa11.13□□□□□ -0.63
DDX41-208ENST00000507955 RIGQ13278 110 aa11.13□□□□□ -0.63
DDX41-208ENST00000507955 UBE2V1Q13404 147 aa11.13□□□□□ -0.63
DDX41-208ENST00000507955 PET117Q6UWS5 81 aa11.13□□□□□ -0.63
DDX41-208ENST00000507955 AMN1Q8IY45 258 aa11.13□□□□□ -0.63
DDX41-208ENST00000507955 LOC389332A0A1B0GUA5 103 aa11.13□□□□□ -0.63
DDX41-208ENST00000507955 NUDT3O95989 172 aa11.13□□□□□ -0.63
DDX41-208ENST00000507955 ORM1P02763 201 aa11.13□□□□□ -0.63
DDX41-208ENST00000507955 TMEM95Q3KNT9 176 aa11.13□□□□□ -0.63
DDX41-208ENST00000507955 RNASE8Q8TDE3 154 aaKnown RBP11.13□□□□□ -0.63
DDX41-208ENST00000507955 AP5S1Q9NUS5 200 aa11.13□□□□□ -0.63
DDX41-208ENST00000507955 TLN2Q9Y4G6 2542 aa11.13□□□□□ -0.63
DDX41-208ENST00000507955 UBR5O95071 2799 aaPredicted RBP11.13□□□□□ -0.63
DDX41-208ENST00000507955 IGKV3-7A0A075B6H7 116 aa11.12□□□□□ -0.63
DDX41-208ENST00000507955 TRAV8-2A0A0B4J237 113 aa11.12□□□□□ -0.63
DDX41-208ENST00000507955 SMKR1H3BMG3 65 aa11.12□□□□□ -0.63
DDX41-208ENST00000507955 BVES-AS1Q5T3Y7 98 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms