RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 GAGE12FP0CL80 117 aa10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 GAGE12GP0CL81 117 aa10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 GAGE12IP0CL82 117 aa10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 CSN1S1P47710 185 aa10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 DEFA1P59665 94 aa10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 DEFA3P59666 94 aa10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 NHLH2Q02577 135 aa10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 KIR3DS1Q14943 382 aa10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 IBA57Q5T440 356 aaKnown RBP10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 LYPD1Q8N2G4 141 aa10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 C6orf223Q8N319 242 aa10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 FAM19A4Q96LR4 140 aa10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 PARD6GQ9BYG4 376 aaPredicted RBP10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 WDR61Q9GZS3 305 aaKnown RBP10.08□□□□□ -0.8
HMGCS1-203ENST00000507004 TRAV26-1A0A087WT03 109 aa10.07□□□□□ -0.8
HMGCS1-203ENST00000507004 A0A1W2PPQ1 181 aa10.07□□□□□ -0.8
HMGCS1-203ENST00000507004 J3KRW8 73 aa10.07□□□□□ -0.8
HMGCS1-203ENST00000507004 GPX1P07203 203 aa10.07□□□□□ -0.8
HMGCS1-203ENST00000507004 PYYP10082 97 aa10.07□□□□□ -0.8
HMGCS1-203ENST00000507004 SSX7Q7RTT5 188 aa10.07□□□□□ -0.8
HMGCS1-203ENST00000507004 THAP6Q8TBB0 222 aa10.07□□□□□ -0.8
HMGCS1-203ENST00000507004 BLNKQ8WV28 456 aa10.07□□□□□ -0.8
HMGCS1-203ENST00000507004 UPK3BQ9BT76 320 aa10.07□□□□□ -0.8
HMGCS1-203ENST00000507004 PAXXQ9BUH6 204 aa10.07□□□□□ -0.8
HMGCS1-203ENST00000507004 SLC25A2Q9BXI2 301 aa10.07□□□□□ -0.8
HMGCS1-203ENST00000507004 AGPAT4-IT1Q9H0P7 198 aa10.07□□□□□ -0.8
HMGCS1-203ENST00000507004 PTTG2Q9NZH5 202 aa10.07□□□□□ -0.8
HMGCS1-203ENST00000507004 FUT9Q9Y231 359 aa10.07□□□□□ -0.8
HMGCS1-203ENST00000507004 LINC00588Q9Y4M8 146 aa10.07□□□□□ -0.8
HMGCS1-203ENST00000507004 TRGV2A0A075B6R0 118 aa10.06□□□□□ -0.8
HMGCS1-203ENST00000507004 RBAKDNA6NC62 111 aa10.06□□□□□ -0.8
HMGCS1-203ENST00000507004 TAS2R45P59539 299 aa10.06□□□□□ -0.8
HMGCS1-203ENST00000507004 SLAQ13239 276 aa10.06□□□□□ -0.8
HMGCS1-203ENST00000507004 ICAM4Q14773 271 aa10.06□□□□□ -0.8
HMGCS1-203ENST00000507004 LRRC37A5PQ49AS3 106 aa10.06□□□□□ -0.8
HMGCS1-203ENST00000507004 FAM167A-AS1Q96KT0 104 aa10.06□□□□□ -0.8
HMGCS1-203ENST00000507004 ATP5SQ99766 215 aa10.06□□□□□ -0.8
HMGCS1-203ENST00000507004 MARVELD1Q9BSK0 173 aa10.06□□□□□ -0.8
HMGCS1-203ENST00000507004 DNAH17Q9UFH2 4485 aa10.06□□□□□ -0.8
HMGCS1-203ENST00000507004 RGS13O14921 159 aa10.05□□□□□ -0.8
HMGCS1-203ENST00000507004 ZNF324O75467 553 aaPredicted RBP10.05□□□□□ -0.8
HMGCS1-203ENST00000507004 IFNA5P01569 189 aa10.05□□□□□ -0.8
HMGCS1-203ENST00000507004 TCL1AP56279 114 aa10.05□□□□□ -0.8
HMGCS1-203ENST00000507004 MIR17HGQ75NE6 70 aa10.05□□□□□ -0.8
HMGCS1-203ENST00000507004 EXOC3-AS1Q8N2X6 119 aa10.05□□□□□ -0.8
HMGCS1-203ENST00000507004 SCGB1C1Q8TD33 95 aa10.05□□□□□ -0.8
HMGCS1-203ENST00000507004 PPP1R1CQ8WVI7 109 aa10.05□□□□□ -0.8
HMGCS1-203ENST00000507004 ARPC5LQ9BPX5 153 aa10.05□□□□□ -0.8
HMGCS1-203ENST00000507004 Q9H8V8 135 aa10.05□□□□□ -0.8
HMGCS1-203ENST00000507004 OR5AC2Q9NZP5 309 aa10.05□□□□□ -0.8
HMGCS1-203ENST00000507004 ZNF492Q9P255 531 aa10.05□□□□□ -0.8
HMGCS1-203ENST00000507004 LENEPQ9Y5L5 61 aa10.05□□□□□ -0.8
HMGCS1-203ENST00000507004 FAT2Q9NYQ8 4349 aa10.04□□□□□ -0.8
HMGCS1-203ENST00000507004 OR7C2O60412 319 aa10.04□□□□□ -0.8
HMGCS1-203ENST00000507004 SIX6O95475 246 aa10.04□□□□□ -0.8
HMGCS1-203ENST00000507004 PRB4P10163 310 aaPredicted RBP10.04□□□□□ -0.8
HMGCS1-203ENST00000507004 RNASE4P34096 147 aaKnown RBP10.04□□□□□ -0.8
HMGCS1-203ENST00000507004 ZNF138P52744 262 aa10.04□□□□□ -0.8
HMGCS1-203ENST00000507004 ERCC8Q13216 396 aa10.04□□□□□ -0.8
HMGCS1-203ENST00000507004 GCSAMLQ5JQS6 135 aa10.04□□□□□ -0.8
HMGCS1-203ENST00000507004 C11orf72Q8NBR9 251 aa10.04□□□□□ -0.8
HMGCS1-203ENST00000507004 GSN-AS1Q9NRJ2 163 aa10.04□□□□□ -0.8
HMGCS1-203ENST00000507004 MRPS16Q9Y3D3 137 aaKnown RBP10.04□□□□□ -0.8
HMGCS1-203ENST00000507004 IGHV1OR15-1A0A075B7D0 117 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 TRGV1A0A0A0MS02 117 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 H0YIZ8 118 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 SSNA1O43805 119 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 SPINK4O60575 86 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 HOXA5P20719 270 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 BTN1A1Q13410 526 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 KHDC3LQ587J8 217 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 FAM74A1Q5RGS3 127 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 FAM122CQ6P4D5 195 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 Q6ZTI0 123 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 ZFAND2AQ8N6M9 145 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 ARL6IP6Q8N6S5 226 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 FXYD5Q96DB9 178 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 DNAH2Q9P225 4427 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 HSPB11Q9Y547 144 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 DNAH11Q96DT5 4516 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 KIAA1109Q2LD37 5005 aa10.03□□□□□ -0.8
HMGCS1-203ENST00000507004 A0A0J9YY99 117 aa10.02□□□□□ -0.81
HMGCS1-203ENST00000507004 A6NHS1 94 aa10.02□□□□□ -0.81
HMGCS1-203ENST00000507004 MPC2O95563 127 aa10.02□□□□□ -0.81
HMGCS1-203ENST00000507004 UBE2L3P68036 154 aaKnown RBP10.02□□□□□ -0.81
HMGCS1-203ENST00000507004 CD300CQ08708 224 aa10.02□□□□□ -0.81
HMGCS1-203ENST00000507004 ZNF415Q09FC8 603 aa10.02□□□□□ -0.81
HMGCS1-203ENST00000507004 TMED6Q8WW62 240 aa10.02□□□□□ -0.81
HMGCS1-203ENST00000507004 Q9H3A6 140 aa10.02□□□□□ -0.81
HMGCS1-203ENST00000507004 TMPRSS5Q9H3S3 457 aa10.02□□□□□ -0.81
HMGCS1-203ENST00000507004 IGKV2-40A0A087WW87 121 aaPredicted RBP10.01□□□□□ -0.81
HMGCS1-203ENST00000507004 IGKV2D-40P01614 121 aaPredicted RBP10.01□□□□□ -0.81
HMGCS1-203ENST00000507004 OR10J4P0C629 311 aa10.01□□□□□ -0.81
HMGCS1-203ENST00000507004 RPL12P30050 165 aaKnown RBP10.01□□□□□ -0.81
HMGCS1-203ENST00000507004 H2BFSP57053 126 aa10.01□□□□□ -0.81
HMGCS1-203ENST00000507004 ZNF266Q14584 549 aa10.01□□□□□ -0.81
HMGCS1-203ENST00000507004 FFAR4Q5NUL3 377 aa10.01□□□□□ -0.81
HMGCS1-203ENST00000507004 ST6GAL2Q96JF0 529 aa10.01□□□□□ -0.81
HMGCS1-203ENST00000507004 VGLL1Q99990 258 aa10.01□□□□□ -0.81
HMGCS1-203ENST00000507004 RANP62826 216 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms