RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 BLOC1S1P78537 153 aa9.36□□□□□ -0.91
TCOF1-210ENST00000506767 DEFB135Q30KP9 77 aa9.36□□□□□ -0.91
TCOF1-210ENST00000506767 LYPD6BQ8NI32 183 aa9.36□□□□□ -0.91
TCOF1-210ENST00000506767 ZMAT4Q9H898 229 aa9.36□□□□□ -0.91
TCOF1-210ENST00000506767 RETNQ9HD89 108 aa9.36□□□□□ -0.91
TCOF1-210ENST00000506767 XCL2Q9UBD3 114 aa9.36□□□□□ -0.91
TCOF1-210ENST00000506767 EPDR1Q9UM22 224 aa9.36□□□□□ -0.91
TCOF1-210ENST00000506767 SERTM2A0A1B0GWG4 89 aa9.35□□□□□ -0.91
TCOF1-210ENST00000506767 M0R2Z0 102 aa9.35□□□□□ -0.91
TCOF1-210ENST00000506767 SPRY2O43597 315 aa9.35□□□□□ -0.91
TCOF1-210ENST00000506767 PAGE4O60829 102 aa9.35□□□□□ -0.91
TCOF1-210ENST00000506767 AMBPP02760 352 aa9.35□□□□□ -0.91
TCOF1-210ENST00000506767 GNG5P63218 68 aa9.35□□□□□ -0.91
TCOF1-210ENST00000506767 SPINK13Q1W4C9 94 aa9.35□□□□□ -0.91
TCOF1-210ENST00000506767 ZNF680Q8NEM1 530 aa9.35□□□□□ -0.91
TCOF1-210ENST00000506767 RCHY1Q96PM5 261 aa9.35□□□□□ -0.91
TCOF1-210ENST00000506767 ZNF492Q9P255 531 aa9.35□□□□□ -0.91
TCOF1-210ENST00000506767 TRBV7-9A0A0J9YWB2 115 aa9.34□□□□□ -0.91
TCOF1-210ENST00000506767 CDKN1BP46527 198 aa9.34□□□□□ -0.91
TCOF1-210ENST00000506767 ATP5G3P48201 142 aa9.34□□□□□ -0.91
TCOF1-210ENST00000506767 ZNF138P52744 262 aa9.34□□□□□ -0.91
TCOF1-210ENST00000506767 TMEM78Q5T7P6 136 aa9.34□□□□□ -0.91
TCOF1-210ENST00000506767 GOLT1AQ6ZVE7 132 aa9.34□□□□□ -0.91
TCOF1-210ENST00000506767 IGF2BP2-AS1Q96M15 143 aa9.34□□□□□ -0.91
TCOF1-210ENST00000506767 TCEAL7Q9BRU2 100 aa9.34□□□□□ -0.91
TCOF1-210ENST00000506767 ATG101Q9BSB4 218 aa9.34□□□□□ -0.91
TCOF1-210ENST00000506767 MANBALQ9NQG1 85 aa9.34□□□□□ -0.91
TCOF1-210ENST00000506767 RPH3ALQ9UNE2 315 aa9.34□□□□□ -0.91
TCOF1-210ENST00000506767 IGLV2-11P01706 119 aa9.33□□□□□ -0.92
TCOF1-210ENST00000506767 NMBP08949 121 aa9.33□□□□□ -0.92
TCOF1-210ENST00000506767 CRISP2P16562 243 aa9.33□□□□□ -0.92
TCOF1-210ENST00000506767 TSPOP30536 169 aa9.33□□□□□ -0.92
TCOF1-210ENST00000506767 LEPP41159 167 aa9.33□□□□□ -0.92
TCOF1-210ENST00000506767 CST9LP1Q5W188 147 aa9.33□□□□□ -0.92
TCOF1-210ENST00000506767 ZNF705AQ6ZN79 300 aaPredicted RBP9.33□□□□□ -0.92
TCOF1-210ENST00000506767 C1orf158Q8N1D5 194 aa9.33□□□□□ -0.92
TCOF1-210ENST00000506767 CYB561D1Q8N8Q1 229 aa9.33□□□□□ -0.92
TCOF1-210ENST00000506767 HIST1H2BAQ96A08 127 aa9.33□□□□□ -0.92
TCOF1-210ENST00000506767 GNG13Q9P2W3 67 aa9.33□□□□□ -0.92
TCOF1-210ENST00000506767 LENEPQ9Y5L5 61 aa9.33□□□□□ -0.92
TCOF1-210ENST00000506767 TRAV12-2A0A075B6T6 113 aa9.32□□□□□ -0.92
TCOF1-210ENST00000506767 KLLNB2CW77 178 aa9.32□□□□□ -0.92
TCOF1-210ENST00000506767 PEX7O00628 323 aa9.32□□□□□ -0.92
TCOF1-210ENST00000506767 IFNA7P01567 189 aa9.32□□□□□ -0.92
TCOF1-210ENST00000506767 KIR3DS1Q14943 382 aa9.32□□□□□ -0.92
TCOF1-210ENST00000506767 ZFAND2AQ8N6M9 145 aa9.32□□□□□ -0.92
TCOF1-210ENST00000506767 TMEM75Q8N9X5 138 aa9.32□□□□□ -0.92
TCOF1-210ENST00000506767 TXNDC17Q9BRA2 123 aa9.32□□□□□ -0.92
TCOF1-210ENST00000506767 TRAV8-1A0A0A6YYK1 113 aa9.31□□□□□ -0.92
TCOF1-210ENST00000506767 FBLL1A6NHQ2 334 aaKnown RBP9.31□□□□□ -0.92
TCOF1-210ENST00000506767 C11orf94C9JXX5 98 aa9.31□□□□□ -0.92
TCOF1-210ENST00000506767 K7EQM0 130 aa9.31□□□□□ -0.92
TCOF1-210ENST00000506767 INSP01308 110 aa9.31□□□□□ -0.92
TCOF1-210ENST00000506767 RBMY1A1P0DJD3 496 aaKnown RBP9.31□□□□□ -0.92
TCOF1-210ENST00000506767 RBMY1CP0DJD4 496 aa9.31□□□□□ -0.92
TCOF1-210ENST00000506767 RBMY1FQ15415 496 aaKnown RBP9.31□□□□□ -0.92
TCOF1-210ENST00000506767 GFI1BQ5VTD9 330 aa9.31□□□□□ -0.92
TCOF1-210ENST00000506767 OR11H2Q8NH07 326 aa9.31□□□□□ -0.92
TCOF1-210ENST00000506767 Q8TAT8 98 aa9.31□□□□□ -0.92
TCOF1-210ENST00000506767 TVP23CQ96ET8 276 aa9.31□□□□□ -0.92
TCOF1-210ENST00000506767 LINC00479Q96M42 142 aa9.31□□□□□ -0.92
TCOF1-210ENST00000506767 NEU1Q99519 415 aa9.31□□□□□ -0.92
TCOF1-210ENST00000506767 RARRES2Q99969 163 aa9.31□□□□□ -0.92
TCOF1-210ENST00000506767 C20orf144Q9BQM9 153 aa9.31□□□□□ -0.92
TCOF1-210ENST00000506767 U3KQK5 164 aa9.31□□□□□ -0.92
TCOF1-210ENST00000506767 X6R8D5 127 aa9.31□□□□□ -0.92
TCOF1-210ENST00000506767 COL7A1Q02388 2944 aa9.3□□□□□ -0.92
TCOF1-210ENST00000506767 F6UZH7 168 aa9.3□□□□□ -0.92
TCOF1-210ENST00000506767 IFNA1P01562 189 aa9.3□□□□□ -0.92
TCOF1-210ENST00000506767 BCL2P10415 239 aa9.3□□□□□ -0.92
TCOF1-210ENST00000506767 SGK494Q96LW2 274 aa9.3□□□□□ -0.92
TCOF1-210ENST00000506767 PSG8Q9UQ74 426 aa9.3□□□□□ -0.92
TCOF1-210ENST00000506767 KLF12Q9Y4X4 402 aa9.3□□□□□ -0.92
TCOF1-210ENST00000506767 TRBV6-1A0A0K0K1D8 114 aa9.29□□□□□ -0.92
TCOF1-210ENST00000506767 ZNF324O75467 553 aaPredicted RBP9.29□□□□□ -0.92
TCOF1-210ENST00000506767 GPX1P07203 203 aa9.29□□□□□ -0.92
TCOF1-210ENST00000506767 TAGLN2P37802 199 aaKnown RBP9.29□□□□□ -0.92
TCOF1-210ENST00000506767 FLI1Q01543 452 aaPredicted RBP9.29□□□□□ -0.92
TCOF1-210ENST00000506767 IFITM2Q01629 132 aa9.29□□□□□ -0.92
TCOF1-210ENST00000506767 MEF2BQ02080 365 aaPredicted RBP9.29□□□□□ -0.92
TCOF1-210ENST00000506767 PRR9Q5T870 116 aa9.29□□□□□ -0.92
TCOF1-210ENST00000506767 C2CD4CQ8TF44 421 aa9.29□□□□□ -0.92
TCOF1-210ENST00000506767 VAX2Q9UIW0 290 aa9.29□□□□□ -0.92
TCOF1-210ENST00000506767 GOLT1BQ9Y3E0 138 aa9.29□□□□□ -0.92
TCOF1-210ENST00000506767 TRAV34A0A0B4J273 112 aa9.28□□□□□ -0.92
TCOF1-210ENST00000506767 LOC102723971A0A1B0GUV8 181 aa9.28□□□□□ -0.92
TCOF1-210ENST00000506767 SCO2A0A1W2PP80 73 aa9.28□□□□□ -0.92
TCOF1-210ENST00000506767 C7orf71A4D174 169 aa9.28□□□□□ -0.92
TCOF1-210ENST00000506767 SMIM9A6NGZ8 99 aa9.28□□□□□ -0.92
TCOF1-210ENST00000506767 J3KRW8 73 aa9.28□□□□□ -0.92
TCOF1-210ENST00000506767 MIFP14174 115 aa9.28□□□□□ -0.92
TCOF1-210ENST00000506767 BTN1A1Q13410 526 aa9.28□□□□□ -0.92
TCOF1-210ENST00000506767 TMEM256Q8N2U0 113 aa9.28□□□□□ -0.92
TCOF1-210ENST00000506767 Q8NAQ8 132 aa9.28□□□□□ -0.92
TCOF1-210ENST00000506767 PCNPQ8WW12 178 aaKnown RBP9.28□□□□□ -0.92
TCOF1-210ENST00000506767 C11orf52Q96A22 123 aa9.28□□□□□ -0.92
TCOF1-210ENST00000506767 IGHV3OR16-12A0A075B7B8 117 aa9.27□□□□□ -0.93
TCOF1-210ENST00000506767 TRAV12-3A0A0B4J271 114 aa9.27□□□□□ -0.93
TCOF1-210ENST00000506767 RBFOX3A6NFN3 312 aa9.27□□□□□ -0.93
TCOF1-210ENST00000506767 RNASE4P34096 147 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms