RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 JMJD7-PLA2G4BH0Y9G9 81 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 GABARAPH6UMI1 98 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 IGHV3-33P01772 117 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 FABP2P12104 132 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 FABP4P15090 132 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 S100A11P31949 105 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 LSM3P62310 102 aaKnown RBP0.52□□□□□ -2.33
GYPB-207ENST00000506679 SPATA45Q537H7 98 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 SPRNQ5BIV9 151 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 LINC00299Q6ZSB3 139 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 CCL4L1Q8NHW4 92 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 THEM6Q8WUY1 208 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 SKA2Q8WVK7 121 aaPredicted RBP0.52□□□□□ -2.33
GYPB-207ENST00000506679 PSMF1Q92530 271 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 ZC2HC1AQ96GY0 325 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 OR4C12Q96R67 309 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 EFCAB11Q9BUY7 163 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 SPANXA1Q9NS26 97 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 ERCC6L2Q5T890 1561 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 UNC13AQ9UPW8 1703 aa0.52□□□□□ -2.33
GYPB-207ENST00000506679 FAT4Q6V0I7 4981 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 TRBV7-6A0A0J9YX20 115 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 A0A1W2PPM0 123 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 C5orf58C9J3I9 102 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 C5orf67F2Z3F1 127 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 TSTD3H0UI37 97 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 H7BYZ3 331 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 BCL9O00512 1426 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 ZFC3H1O60293 1989 aaKnown RBP0.51□□□□□ -2.33
GYPB-207ENST00000506679 KLF7O75840 302 aaPredicted RBP0.51□□□□□ -2.33
GYPB-207ENST00000506679 TRACP01848 142 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 SAA1P0DJI8 122 aaPredicted RBP0.51□□□□□ -2.33
GYPB-207ENST00000506679 TPT1P13693 172 aaKnown RBP0.51□□□□□ -2.33
GYPB-207ENST00000506679 S100GP29377 79 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 POLR2HP52434 150 aaKnown RBP0.51□□□□□ -2.33
GYPB-207ENST00000506679 B2MP61769 119 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 DIAPH2-AS1Q14236 149 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 HERC1Q15751 4861 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 VMA21Q3ZAQ7 101 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 TMEM128Q5BJH2 165 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 SAMD13Q5VXD3 122 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 LINC00575Q6W349 94 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 FOXI2Q6ZQN5 318 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 LINC00305Q7Z4B0 112 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 LINC00269Q8N2A0 174 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 OR5H6Q8NGV6 325 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 OR10AC1Q8NH08 325 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 OR5AK2Q8NH90 309 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 GRPEL2Q8TAA5 225 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 RMND5BQ96G75 393 aaPredicted RBP0.51□□□□□ -2.33
GYPB-207ENST00000506679 PRELID3AQ96N28 172 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 TANC2Q9HCD6 1990 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 SPANXCQ9NY87 97 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 MED31Q9Y3C7 131 aa0.51□□□□□ -2.33
GYPB-207ENST00000506679 SNRNP200O75643 2136 aaKnown RBP0.5□□□□□ -2.33
GYPB-207ENST00000506679 FER1L6Q2WGJ9 1857 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 KIAA1549LQ6ZVL6 1849 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 PHRF1Q9P1Y6 1649 aaKnown RBP0.5□□□□□ -2.33
GYPB-207ENST00000506679 A2MP01023 1474 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 COL1A1P02452 1464 aaPredicted RBP0.5□□□□□ -2.33
GYPB-207ENST00000506679 TCOF1Q13428 1488 aaKnown RBP0.5□□□□□ -2.33
GYPB-207ENST00000506679 ERBINQ96RT1 1412 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 ANKRD17O75179 2603 aaKnown RBP0.5□□□□□ -2.33
GYPB-207ENST00000506679 TRAV13-1A0A0B4J241 112 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 A0A0J9YY99 117 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 TRBV27A0A0K0K1C4 114 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 C9orf170A2RU37 121 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 PRORSD1PA6NEY8 169 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 PPYP01298 95 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 IGLV3-1P01715 115 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 EFNA4P52798 201 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 MAXP61244 160 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 MIR22HGQ0VDD5 57 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 CCSMST1Q4G0I0 132 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 GLIPR1L1Q6UWM5 242 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 HSPB11Q9Y547 144 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 UNC13CQ8NB66 2214 aa0.5□□□□□ -2.33
GYPB-207ENST00000506679 DOPEY1Q5JWR5 2465 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 DLC1Q96QB1 1528 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 FANCMQ8IYD8 2048 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.49□□□□□ -2.33
GYPB-207ENST00000506679 LOC107986453A0A1B0GWG9 222 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 GNG14A0A1W2PPG7 69 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 ARL5CA6NH57 179 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 H0YJX3 145 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 H3BMG7 143 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 RPS28P62857 69 aaKnown RBP0.49□□□□□ -2.33
GYPB-207ENST00000506679 DR1Q01658 176 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 CASC2Q6XLA1 102 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 Q8N6K4 173 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 TMEM35BQ8NCS4 154 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 MORN4Q8NDC4 146 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 CCDC115Q96NT0 180 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 CIB3Q96Q77 187 aaPredicted RBP0.49□□□□□ -2.33
GYPB-207ENST00000506679 WFDC10AQ9H1F0 79 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 BOKQ9UMX3 212 aaPredicted RBP0.49□□□□□ -2.33
GYPB-207ENST00000506679 CCDC168Q8NDH2 2452 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 USP54Q70EL1 1684 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 BIRC6Q9NR09 4857 aa0.49□□□□□ -2.33
GYPB-207ENST00000506679 HECTD1Q9ULT8 2610 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms