RNA–Protein interactions for RNA: ENST00000506556.1

THUMPD3P1-201, Transcript of THUMP domain containing 3 pseudogene 1, humanhuman

BASIC

Gene THUMPD3P1, Length 1,480 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3P1-201ENST00000506556 NUP210Q8TEM1 1887 aaPredicted RBP2.34□□□□□ -2.03
THUMPD3P1-201ENST00000506556 CDK5RAP2Q96SN8 1893 aa2.34□□□□□ -2.03
THUMPD3P1-201ENST00000506556 UNC79Q9P2D8 2635 aa2.34□□□□□ -2.04
THUMPD3P1-201ENST00000506556 NCOR1O75376 2440 aa2.34□□□□□ -2.04
THUMPD3P1-201ENST00000506556 CACNA1GO43497 2377 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TRBV27A0A0K0K1C4 114 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 A0A1B0GW54 56 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 A8MWP4 228 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 UBFD1O14562 309 aaKnown RBP2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 KLF7O75840 302 aaPredicted RBP2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 IGKV1D-33P01593 117 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 IGKV1-33P01594 117 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 C1QAP02745 245 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 IGKV3-11P04433 115 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 NPPCP23582 126 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 RPL27AP46776 148 aaKnown RBP2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 AKR1C2P52895 323 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 FOXA1P55317 472 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 YPEL3P61236 119 aaPredicted RBP2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 QRFPP83859 136 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 UBE2SQ16763 222 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 SPANXN3Q5MJ09 141 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 Q8N976 141 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 PRELID3AQ96N28 172 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 SEC11CQ9BY50 192 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 PLA2G2FQ9BZM2 168 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 RPP21Q9H633 154 aaKnown RBP2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 FAM60AQ9NP50 221 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TXNL4BQ9NX01 149 aaKnown RBP2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 METTL1Q9UBP6 276 aaKnown RBP2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 KLK5Q9Y337 293 aaPredicted RBP2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 V9GYS6 101 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 MYO5AQ9Y4I1 1855 aaKnown RBP2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TRIP11Q15643 1979 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 ATAD5Q96QE3 1844 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 CHD9Q3L8U1 2897 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 REV3LO60673 3130 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 PNMA8CA0A1B0GUJ8 204 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 C19orf71A6NCJ1 209 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 H3BQF6 201 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 RER1O15258 196 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 SLC25A20O43772 301 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 HIST1H2BKO60814 126 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 HIST1H2BJP06899 126 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 PYYP10082 97 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 CCL3P10147 92 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 HLA-DRB4P13762 266 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 SLC25A16P16260 332 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 CLLU1Q5K131 121 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 SOSTDC1Q6X4U4 206 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TMEM91Q6ZNR0 172 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 C16orf47Q6ZP98 133 aaPredicted RBP2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 HIST3H2BBQ8N257 126 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 C10orf126Q8N4M7 172 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 KCNRGQ8N5I3 272 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 C15orf56Q8N910 161 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 BPIFB6Q8NFQ5 453 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 OR4B1Q8NGF8 309 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 HIST1H2BLQ99880 126 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 DUSP21Q9H596 190 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 C11orf1Q9H5F2 150 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 FKBP11Q9NYL4 201 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TAS2R8Q9NYW2 309 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 LINC00588Q9Y4M8 146 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 IER3IP1Q9Y5U9 82 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 HLA-DRB4X5D2U9 266 aa2.33□□□□□ -2.04
THUMPD3P1-201ENST00000506556 PLIN4Q96Q06 1357 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 PARP14Q460N5 1801 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 KIAA1671Q9BY89 1806 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 IGHV1-3A0A0C4DH29 117 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TMEM223A0PJW6 202 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 HLA-DQA1P01909 254 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TRGC1P0CF51 173 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 ZNF286BP0CG31 522 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 IFITM1P13164 125 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 FXYD7P58549 80 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 MRPL54Q6P161 138 aaKnown RBP2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 ZNF880Q6PDB4 577 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 ZNF322Q6U7Q0 402 aaPredicted RBP2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 ZFP2Q6ZN57 461 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 MIR17HGQ75NE6 70 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 TEN1Q86WV5 123 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 CNEP1R1Q8N9A8 125 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 OR10P1Q8NGE3 313 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 OR10AC1Q8NH08 325 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 SNRNP25Q9BV90 132 aaKnown RBP2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 C16orf95Q9H693 158 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 DNAJC15Q9Y5T4 150 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 MPC1Q9Y5U8 109 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 U3KQK5 164 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 NLRC5Q86WI3 1866 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 DOCK4Q8N1I0 1966 aa2.32□□□□□ -2.04
THUMPD3P1-201ENST00000506556 PLXNB3Q9ULL4 1909 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 CHD7Q9P2D1 2997 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 MYH11P35749 1972 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 H3BMM0 161 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 UQCRQO14949 82 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 SYNGR2O43760 224 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 OR1I1O60431 355 aa2.31□□□□□ -2.04
THUMPD3P1-201ENST00000506556 SH2D1AO60880 128 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms