RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 STAG3L3P0CL85 134 aa5.26□□□□□ -1.57
GYPB-206ENST00000506516 CDKN1BP46527 198 aa5.26□□□□□ -1.57
GYPB-206ENST00000506516 CDC34P49427 236 aaPredicted RBP5.26□□□□□ -1.57
GYPB-206ENST00000506516 RAB2AP61019 212 aa5.26□□□□□ -1.57
GYPB-206ENST00000506516 EIF5AP63241 154 aaKnown RBP5.26□□□□□ -1.57
GYPB-206ENST00000506516 AKR1C8PQ5T2L2 129 aa5.26□□□□□ -1.57
GYPB-206ENST00000506516 ZNF705AQ6ZN79 300 aaPredicted RBP5.26□□□□□ -1.57
GYPB-206ENST00000506516 RPP25LQ8N5L8 163 aaKnown RBP5.26□□□□□ -1.57
GYPB-206ENST00000506516 Q8NAQ8 132 aa5.26□□□□□ -1.57
GYPB-206ENST00000506516 RXFP4Q8TDU9 374 aa5.26□□□□□ -1.57
GYPB-206ENST00000506516 RAB24Q969Q5 203 aa5.26□□□□□ -1.57
GYPB-206ENST00000506516 ZNF503Q96F45 646 aa5.26□□□□□ -1.57
GYPB-206ENST00000506516 LINC00477Q96M19 166 aa5.26□□□□□ -1.57
GYPB-206ENST00000506516 TRAV12-2A0A075B6T6 113 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 PGPA6NDG6 321 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 M0R2Z0 102 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 M0R3E3 92 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 DEFB4AO15263 64 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 HMGB3O15347 200 aaKnown RBP5.25□□□□□ -1.57
GYPB-206ENST00000506516 CRXO43186 299 aaPredicted RBP5.25□□□□□ -1.57
GYPB-206ENST00000506516 PFDN1O60925 122 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 CXorf1O96002 111 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 HBE1P02100 147 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 RBMY1A1P0DJD3 496 aaKnown RBP5.25□□□□□ -1.57
GYPB-206ENST00000506516 RBMY1CP0DJD4 496 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 LEPP41159 167 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 RBMY1FQ15415 496 aaKnown RBP5.25□□□□□ -1.57
GYPB-206ENST00000506516 RRN3P1Q2M238 152 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 TMEM78Q5T7P6 136 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 TCTE3Q8IZS6 198 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 C1orf158Q8N1D5 194 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 TMEM256Q8N2U0 113 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 ARL6IP6Q8N6S5 226 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 OR11H4Q8NGC9 324 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 CMTM2Q8TAZ6 248 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 ODF3Q96PU9 254 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 LINC01587Q99440 93 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 C20orf144Q9BQM9 153 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 SH3BGRL3Q9H299 93 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 Q9H3A6 140 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 OTORQ9NRC9 128 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 CYTL1Q9NRR1 136 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 TMEM167BQ9NRX6 74 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 DNAH7Q8WXX0 4024 aa5.25□□□□□ -1.57
GYPB-206ENST00000506516 EIF3GO75821 320 aaKnown RBP eCLIP5.24□□□□□ -1.57
GYPB-206ENST00000506516 SEC11BP0C7V7 166 aa5.24□□□□□ -1.57
GYPB-206ENST00000506516 SPART-AS1P0CW21 52 aa5.24□□□□□ -1.57
GYPB-206ENST00000506516 ARL14EPLP0DKL9 152 aa5.24□□□□□ -1.57
GYPB-206ENST00000506516 CT45A10P0DMU9 189 aa5.24□□□□□ -1.57
GYPB-206ENST00000506516 PRB4P10163 310 aaPredicted RBP5.24□□□□□ -1.57
GYPB-206ENST00000506516 PMS2P11Q13670 270 aa5.24□□□□□ -1.57
GYPB-206ENST00000506516 C9orf47Q6ZRZ4 202 aa5.24□□□□□ -1.57
GYPB-206ENST00000506516 TMUB2Q71RG4 321 aa5.24□□□□□ -1.57
GYPB-206ENST00000506516 PHYHIPLQ96FC7 376 aa5.24□□□□□ -1.57
GYPB-206ENST00000506516 ST6GAL2Q96JF0 529 aa5.24□□□□□ -1.57
GYPB-206ENST00000506516 HYLS1Q96M11 299 aa5.24□□□□□ -1.57
GYPB-206ENST00000506516 ZNF471Q9BX82 626 aaPredicted RBP5.24□□□□□ -1.57
GYPB-206ENST00000506516 AGPAT4-IT1Q9H0P7 198 aa5.24□□□□□ -1.57
GYPB-206ENST00000506516 KLK5Q9Y337 293 aaPredicted RBP5.24□□□□□ -1.57
GYPB-206ENST00000506516 CTXND1A0A1B0GTU2 59 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 RBAKDNA6NC62 111 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 NUPR2A6NF83 97 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 UMAD1C9J7I0 102 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 DIRC3C9JPN6 131 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 C11orf94C9JXX5 98 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 H7BYZ3 331 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 J3KRW8 73 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 BCL2L11O43521 198 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 C1QBP02746 253 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 SLC25A5P05141 298 aaKnown RBP5.23□□□□□ -1.57
GYPB-206ENST00000506516 GPX1P07203 203 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 NMBP08949 121 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 HTN1P15515 57 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 GCHFRP30047 84 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 ZNF138P52744 262 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 EMP1P54849 157 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 TAS2R60P59551 318 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 NANOS2P60321 138 aaKnown RBP5.23□□□□□ -1.57
GYPB-206ENST00000506516 ERCC8Q13216 396 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 EIF5AL1Q6IS14 154 aaKnown RBP5.23□□□□□ -1.57
GYPB-206ENST00000506516 CEMP1Q6PRD7 247 aaPredicted RBP5.23□□□□□ -1.57
GYPB-206ENST00000506516 AKAP14Q86UN6 197 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 CCDC28AQ8IWP9 274 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 IQCF2Q8IXL9 164 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 BAP18Q8IXM2 172 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 STOML3Q8TAV4 291 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 SUN5Q8TC36 379 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 PHLDA1Q8WV24 401 aaPredicted RBP5.23□□□□□ -1.57
GYPB-206ENST00000506516 NIPSNAP3BQ9BS92 247 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 ZNF492Q9P255 531 aa5.23□□□□□ -1.57
GYPB-206ENST00000506516 IGKV2-40A0A087WW87 121 aaPredicted RBP5.22□□□□□ -1.57
GYPB-206ENST00000506516 TRAV12-3A0A0B4J271 114 aa5.22□□□□□ -1.57
GYPB-206ENST00000506516 TRBV7-9A0A0J9YWB2 115 aa5.22□□□□□ -1.57
GYPB-206ENST00000506516 TEX48A0A1B0GUV7 120 aa5.22□□□□□ -1.57
GYPB-206ENST00000506516 LOC102723971A0A1B0GUV8 181 aa5.22□□□□□ -1.57
GYPB-206ENST00000506516 SERTM2A0A1B0GWG4 89 aa5.22□□□□□ -1.57
GYPB-206ENST00000506516 ZNF705GA8MUZ8 300 aaPredicted RBP5.22□□□□□ -1.57
GYPB-206ENST00000506516 K7EQM0 130 aa5.22□□□□□ -1.57
GYPB-206ENST00000506516 IGKV2D-40P01614 121 aaPredicted RBP5.22□□□□□ -1.57
GYPB-206ENST00000506516 TPT1P13693 172 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms