RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 IGHV3OR16-13A0A075B7E8 117 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 IGHV3-49A0A0A0MS15 119 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 IGHV3-74A0A0B4J1X5 117 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 TRAV25A0A0B4J276 109 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 HELTA6NFD8 242 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 IFITM10A6NMD0 228 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 PHOX2AO14813 284 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 HMGB3O15347 200 aaKnown RBP5.43□□□□□ -1.54
NUP54-204ENST00000506098 OR7C2O60412 319 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 ZNF253O75346 499 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 IGLV1-51P01701 117 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 SNRPCP09234 159 aaKnown RBP5.43□□□□□ -1.54
NUP54-204ENST00000506098 PYYP10082 97 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 GCHFRP30047 84 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 GALR1P47211 349 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 PSMB3P49720 205 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 INSL3P51460 131 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 PDE6HQ13956 83 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 DEFB114Q30KQ6 69 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 LCN15Q6UWW0 184 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 OR2K2Q8NGT1 345 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 FXYD5Q96DB9 178 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 MCRIP2Q9BUT9 160 aaKnown RBP5.43□□□□□ -1.54
NUP54-204ENST00000506098 TMEM167BQ9NRX6 74 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 ZNF586Q9NXT0 402 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 ARL2-SNX15V9GYD0 113 aa5.43□□□□□ -1.54
NUP54-204ENST00000506098 PKD1L1Q8TDX9 2849 aa5.42□□□□□ -1.54
NUP54-204ENST00000506098 TRAV2A0A0B4J234 112 aa5.42□□□□□ -1.54
NUP54-204ENST00000506098 IGHV3-66A0A0C4DH42 116 aa5.42□□□□□ -1.54
NUP54-204ENST00000506098 H3BQ15 152 aa5.42□□□□□ -1.54
NUP54-204ENST00000506098 M0R036 132 aa5.42□□□□□ -1.54
NUP54-204ENST00000506098 TSPAN13O95857 204 aa5.42□□□□□ -1.54
NUP54-204ENST00000506098 ADCYAP1P18509 176 aa5.42□□□□□ -1.54
NUP54-204ENST00000506098 CD33P20138 364 aa5.42□□□□□ -1.54
NUP54-204ENST00000506098 CCL20P78556 96 aa5.42□□□□□ -1.54
NUP54-204ENST00000506098 OR5I1Q13606 314 aa5.42□□□□□ -1.54
NUP54-204ENST00000506098 COX19Q49B96 90 aa5.42□□□□□ -1.54
NUP54-204ENST00000506098 COA6Q5JTJ3 125 aaKnown RBP5.42□□□□□ -1.54
NUP54-204ENST00000506098 C9orf66Q5T8R8 295 aa5.42□□□□□ -1.54
NUP54-204ENST00000506098 SAMD13Q5VXD3 122 aa5.42□□□□□ -1.54
NUP54-204ENST00000506098 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.42□□□□□ -1.54
NUP54-204ENST00000506098 LYPD1Q8N2G4 141 aa5.42□□□□□ -1.54
NUP54-204ENST00000506098 PRO1933Q9H354 126 aa5.42□□□□□ -1.54
NUP54-204ENST00000506098 TRBV19A0A075B6N1 114 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 A0A1W2PRE2 83 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 F8WDY8 70 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 K7EQG2 157 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 SOCS3O14543 225 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 CCL25O15444 150 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 SAP30O75446 220 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 NDUFB4O95168 129 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 GZMBP10144 247 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 CRYBA4P53673 196 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 UBE2L3P68036 154 aaKnown RBP5.41□□□□□ -1.54
NUP54-204ENST00000506098 CD300EQ496F6 205 aaPredicted RBP5.41□□□□□ -1.54
NUP54-204ENST00000506098 TMEM61Q8N0U2 210 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 ZNF738Q8NE65 137 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 DYNLRB2Q8TF09 96 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 DCANP1Q8TF63 244 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 MIEN1Q9BRT3 115 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 SLC50A1Q9BRV3 221 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 SMDT1Q9H4I9 107 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 NRN1Q9NPD7 142 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 VAX2Q9UIW0 290 aa5.41□□□□□ -1.54
NUP54-204ENST00000506098 TRAV34A0A0B4J273 112 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 IZUMO1RA6ND01 250 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 ZNF785A8K8V0 405 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 ISLRO14498 428 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 SMIM17P0DL12 118 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 PAFAH1B2P68402 229 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 PSG9Q00887 426 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 VAMP3Q15836 100 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 RNF151Q2KHN1 245 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 C5orf47Q569G3 176 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 PRR31Q5SQ13 230 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 LCN12Q6JVE5 192 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 PRR27Q6MZM9 219 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 RBPMS2Q6ZRY4 209 aaKnown RBP5.4□□□□□ -1.54
NUP54-204ENST00000506098 OR4C5Q8NGB2 326 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 PCNPQ8WW12 178 aaKnown RBP5.4□□□□□ -1.54
NUP54-204ENST00000506098 SPAG8Q99932 426 aaPredicted RBP5.4□□□□□ -1.54
NUP54-204ENST00000506098 TXNDC17Q9BRA2 123 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 MS4A6AQ9H2W1 248 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 CST9LQ9H4G1 147 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 MANBALQ9NQG1 85 aa5.4□□□□□ -1.54
NUP54-204ENST00000506098 ZNF331Q9NQX6 463 aaPredicted RBP5.4□□□□□ -1.54
NUP54-204ENST00000506098 ZNF256Q9Y2P7 627 aaPredicted RBP5.4□□□□□ -1.54
NUP54-204ENST00000506098 DNAH3Q8TD57 4116 aa5.4□□□□□ -1.55
NUP54-204ENST00000506098 A0A087WWC5 75 aa5.39□□□□□ -1.55
NUP54-204ENST00000506098 TRAV8-2A0A0B4J237 113 aa5.39□□□□□ -1.55
NUP54-204ENST00000506098 A0A1B0GV50 99 aa5.39□□□□□ -1.55
NUP54-204ENST00000506098 SLC17A3O00476 420 aa5.39□□□□□ -1.55
NUP54-204ENST00000506098 PAGE4O60829 102 aa5.39□□□□□ -1.55
NUP54-204ENST00000506098 IFNA1P01562 189 aa5.39□□□□□ -1.55
NUP54-204ENST00000506098 IGLL1P15814 213 aa5.39□□□□□ -1.55
NUP54-204ENST00000506098 BEAN1Q3B7T3 259 aa5.39□□□□□ -1.55
NUP54-204ENST00000506098 ZNF506Q5JVG8 444 aa5.39□□□□□ -1.55
NUP54-204ENST00000506098 BLNKQ8WV28 456 aa5.39□□□□□ -1.55
NUP54-204ENST00000506098 MRPL53Q96EL3 112 aaKnown RBP5.39□□□□□ -1.55
NUP54-204ENST00000506098 YPEL4Q96NS1 127 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms