RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 SLC39A9Q9NUM3 307 aa14.5□□□□□ -0.09
SQSTM1-210ENST00000506042 TMEM14CQ9P0S9 112 aa14.5□□□□□ -0.09
SQSTM1-210ENST00000506042 TRBV19A0A075B6N1 114 aa14.49□□□□□ -0.09
SQSTM1-210ENST00000506042 PRB4P10163 310 aaPredicted RBP14.49□□□□□ -0.09
SQSTM1-210ENST00000506042 TCL1AP56279 114 aa14.49□□□□□ -0.09
SQSTM1-210ENST00000506042 ATP6V1FQ16864 119 aa14.49□□□□□ -0.09
SQSTM1-210ENST00000506042 MIC13Q5XKP0 118 aa14.49□□□□□ -0.09
SQSTM1-210ENST00000506042 FRZBQ92765 325 aa14.49□□□□□ -0.09
SQSTM1-210ENST00000506042 ST6GAL2Q96JF0 529 aa14.49□□□□□ -0.09
SQSTM1-210ENST00000506042 WDR83OSQ9Y284 106 aa14.49□□□□□ -0.09
SQSTM1-210ENST00000506042 ZNF324O75467 553 aaPredicted RBP14.48□□□□□ -0.09
SQSTM1-210ENST00000506042 CST7O76096 145 aa14.48□□□□□ -0.09
SQSTM1-210ENST00000506042 NXPH4O95158 308 aa14.48□□□□□ -0.09
SQSTM1-210ENST00000506042 RNASE4P34096 147 aaKnown RBP14.48□□□□□ -0.09
SQSTM1-210ENST00000506042 KRTAP10-2P60368 255 aa14.48□□□□□ -0.09
SQSTM1-210ENST00000506042 ARL16Q0P5N6 197 aa14.48□□□□□ -0.09
SQSTM1-210ENST00000506042 GPN1Q9HCN4 374 aaPredicted RBP14.48□□□□□ -0.09
SQSTM1-210ENST00000506042 KCNIP2Q9NS61 270 aa14.48□□□□□ -0.09
SQSTM1-210ENST00000506042 RYR1P21817 5038 aa14.48□□□□□ -0.09
SQSTM1-210ENST00000506042 DYNC1H1Q14204 4646 aaKnown RBP14.47□□□□□ -0.09
SQSTM1-210ENST00000506042 UBE2L5PA0A1B0GUS4 154 aa14.47□□□□□ -0.09
SQSTM1-210ENST00000506042 KLLNB2CW77 178 aa14.47□□□□□ -0.09
SQSTM1-210ENST00000506042 SULT1A1P50225 295 aa14.47□□□□□ -0.09
SQSTM1-210ENST00000506042 ZNF415Q09FC8 603 aa14.47□□□□□ -0.09
SQSTM1-210ENST00000506042 VSIG2Q96IQ7 327 aa14.47□□□□□ -0.09
SQSTM1-210ENST00000506042 SPINK4O60575 86 aa14.46□□□□□ -0.09
SQSTM1-210ENST00000506042 BAK1Q16611 211 aa14.46□□□□□ -0.09
SQSTM1-210ENST00000506042 MORN5Q5VZ52 161 aa14.46□□□□□ -0.09
SQSTM1-210ENST00000506042 NEGR1Q7Z3B1 354 aa14.46□□□□□ -0.09
SQSTM1-210ENST00000506042 VGLL1Q99990 258 aa14.46□□□□□ -0.09
SQSTM1-210ENST00000506042 HHLA3Q9XRX5 114 aa14.46□□□□□ -0.09
SQSTM1-210ENST00000506042 BOLA1Q9Y3E2 137 aa14.46□□□□□ -0.09
SQSTM1-210ENST00000506042 LY96Q9Y6Y9 160 aa14.46□□□□□ -0.09
SQSTM1-210ENST00000506042 TRGV4A0A0C4DH28 118 aa14.45□□□□□ -0.1
SQSTM1-210ENST00000506042 CRISP2P16562 243 aa14.45□□□□□ -0.1
SQSTM1-210ENST00000506042 FGF7P21781 194 aa14.45□□□□□ -0.1
SQSTM1-210ENST00000506042 EVI2AP22794 236 aa14.45□□□□□ -0.1
SQSTM1-210ENST00000506042 CSN1S1P47710 185 aa14.45□□□□□ -0.1
SQSTM1-210ENST00000506042 S100A10P60903 97 aa14.45□□□□□ -0.1
SQSTM1-210ENST00000506042 C9orf47Q6ZRZ4 202 aa14.45□□□□□ -0.1
SQSTM1-210ENST00000506042 C11orf72Q8NBR9 251 aa14.45□□□□□ -0.1
SQSTM1-210ENST00000506042 CHAC2Q8WUX2 184 aa14.45□□□□□ -0.1
SQSTM1-210ENST00000506042 BLNKQ8WV28 456 aa14.45□□□□□ -0.1
SQSTM1-210ENST00000506042 C2orf50Q96LR7 162 aa14.45□□□□□ -0.1
SQSTM1-210ENST00000506042 IGHV1OR15-1A0A075B7D0 117 aa14.44□□□□□ -0.1
SQSTM1-210ENST00000506042 TRAV5A0A0B4J249 113 aa14.44□□□□□ -0.1
SQSTM1-210ENST00000506042 TRBV7-9A0A0J9YWB2 115 aa14.44□□□□□ -0.1
SQSTM1-210ENST00000506042 BTN1A1Q13410 526 aa14.44□□□□□ -0.1
SQSTM1-210ENST00000506042 VWC2Q2TAL6 325 aa14.44□□□□□ -0.1
SQSTM1-210ENST00000506042 LYRM2Q9NU23 88 aaPredicted RBP14.44□□□□□ -0.1
SQSTM1-210ENST00000506042 M0R3E3 92 aa14.43□□□□□ -0.1
SQSTM1-210ENST00000506042 CCSO14618 274 aa14.43□□□□□ -0.1
SQSTM1-210ENST00000506042 ORM1P02763 201 aa14.43□□□□□ -0.1
SQSTM1-210ENST00000506042 SRIP30626 198 aa14.43□□□□□ -0.1
SQSTM1-210ENST00000506042 ERCC8Q13216 396 aa14.43□□□□□ -0.1
SQSTM1-210ENST00000506042 C10orf126Q8N4M7 172 aa14.43□□□□□ -0.1
SQSTM1-210ENST00000506042 AGPAT4-IT1Q9H0P7 198 aa14.43□□□□□ -0.1
SQSTM1-210ENST00000506042 ICAM4Q14773 271 aa14.42□□□□□ -0.1
SQSTM1-210ENST00000506042 TXNDC17Q9BRA2 123 aa14.42□□□□□ -0.1
SQSTM1-210ENST00000506042 KLF12Q9Y4X4 402 aa14.42□□□□□ -0.1
SQSTM1-210ENST00000506042 FAM24AA6NFZ4 105 aa14.41□□□□□ -0.1
SQSTM1-210ENST00000506042 IGHV3-53P01767 116 aa14.41□□□□□ -0.1
SQSTM1-210ENST00000506042 INAFM2P0DMQ5 153 aa14.41□□□□□ -0.1
SQSTM1-210ENST00000506042 IL7P13232 177 aa14.41□□□□□ -0.1
SQSTM1-210ENST00000506042 CD300CQ08708 224 aa14.41□□□□□ -0.1
SQSTM1-210ENST00000506042 SH2D6Q7Z4S9 175 aa14.41□□□□□ -0.1
SQSTM1-210ENST00000506042 ZNF138P52744 262 aa14.4□□□□□ -0.1
SQSTM1-210ENST00000506042 CRYBA4P53673 196 aa14.4□□□□□ -0.1
SQSTM1-210ENST00000506042 FAM122CQ6P4D5 195 aa14.4□□□□□ -0.1
SQSTM1-210ENST00000506042 Q6ZRN7 208 aaPredicted RBP14.4□□□□□ -0.1
SQSTM1-210ENST00000506042 FAM19A4Q96LR4 140 aa14.4□□□□□ -0.1
SQSTM1-210ENST00000506042 SPXQ9BT56 116 aa14.4□□□□□ -0.1
SQSTM1-210ENST00000506042 MRPL32Q9BYC8 188 aaKnown RBP14.4□□□□□ -0.1
SQSTM1-210ENST00000506042 MRPL16Q9NX20 251 aaKnown RBP14.4□□□□□ -0.1
SQSTM1-210ENST00000506042 C9JCJ5 164 aa14.39□□□□□ -0.11
SQSTM1-210ENST00000506042 LYRM1O43325 122 aa14.39□□□□□ -0.11
SQSTM1-210ENST00000506042 NBEAP1P0C6P0 100 aa14.39□□□□□ -0.11
SQSTM1-210ENST00000506042 BTCP35070 178 aa14.39□□□□□ -0.11
SQSTM1-210ENST00000506042 LYPD5Q6UWN5 251 aa14.39□□□□□ -0.11
SQSTM1-210ENST00000506042 LYPD1Q8N2G4 141 aa14.39□□□□□ -0.11
SQSTM1-210ENST00000506042 EXOC3-AS1Q8N2X6 119 aa14.39□□□□□ -0.11
SQSTM1-210ENST00000506042 TMEM252Q8N6L7 170 aa14.39□□□□□ -0.11
SQSTM1-210ENST00000506042 C8orf49Q96NF6 230 aa14.39□□□□□ -0.11
SQSTM1-210ENST00000506042 SLC25A31Q9H0C2 315 aa14.39□□□□□ -0.11
SQSTM1-210ENST00000506042 MSRB1Q9NZV6 116 aa14.39□□□□□ -0.11
SQSTM1-210ENST00000506042 ZNF492Q9P255 531 aa14.39□□□□□ -0.11
SQSTM1-210ENST00000506042 TRGV11A0A075B6L2 103 aa14.38□□□□□ -0.11
SQSTM1-210ENST00000506042 C17orf112F2Z3M2 114 aa14.38□□□□□ -0.11
SQSTM1-210ENST00000506042 TCRBP04435 133 aa14.38□□□□□ -0.11
SQSTM1-210ENST00000506042 PYYP10082 97 aa14.38□□□□□ -0.11
SQSTM1-210ENST00000506042 FAM159AQ6UWV7 190 aa14.38□□□□□ -0.11
SQSTM1-210ENST00000506042 OR51M1Q9H341 326 aa14.38□□□□□ -0.11
SQSTM1-210ENST00000506042 NUDT15Q9NV35 164 aa14.38□□□□□ -0.11
SQSTM1-210ENST00000506042 ABCA13Q86UQ4 5058 aa14.37□□□□□ -0.11
SQSTM1-210ENST00000506042 TRAV6A0A075B6T7 132 aa14.37□□□□□ -0.11
SQSTM1-210ENST00000506042 PSCAO43653 123 aa14.37□□□□□ -0.11
SQSTM1-210ENST00000506042 PRAF2O60831 178 aa14.37□□□□□ -0.11
SQSTM1-210ENST00000506042 NDUFB4O95168 129 aa14.37□□□□□ -0.11
SQSTM1-210ENST00000506042 NPCDR1Q9BY65 106 aa14.37□□□□□ -0.11
SQSTM1-210ENST00000506042 IGKV2-40A0A087WW87 121 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms