RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 DLK1P80370 383 aa6.86□□□□□ -1.31
NEDD9-210ENST00000505589 SLC38A11Q08AI6 406 aa6.86□□□□□ -1.31
NEDD9-210ENST00000505589 ARL16Q0P5N6 197 aa6.86□□□□□ -1.31
NEDD9-210ENST00000505589 ZNF266Q14584 549 aa6.86□□□□□ -1.31
NEDD9-210ENST00000505589 ESRGQ1W209 222 aa6.86□□□□□ -1.31
NEDD9-210ENST00000505589 RPL7L1Q6DKI1 246 aaKnown RBP6.86□□□□□ -1.31
NEDD9-210ENST00000505589 TEX261Q6UWH6 196 aa6.86□□□□□ -1.31
NEDD9-210ENST00000505589 ZNF738Q8NE65 137 aa6.86□□□□□ -1.31
NEDD9-210ENST00000505589 ZNF680Q8NEM1 530 aa6.86□□□□□ -1.31
NEDD9-210ENST00000505589 PHYHIPLQ96FC7 376 aa6.86□□□□□ -1.31
NEDD9-210ENST00000505589 ATP5SQ99766 215 aa6.86□□□□□ -1.31
NEDD9-210ENST00000505589 WFDC1Q9HC57 220 aa6.86□□□□□ -1.31
NEDD9-210ENST00000505589 PAIP2BQ9ULR5 123 aaKnown RBP6.86□□□□□ -1.31
NEDD9-210ENST00000505589 IGKV1D-37A0A075B6S9 117 aa6.85□□□□□ -1.31
NEDD9-210ENST00000505589 PLAC8L1A1L4L8 177 aa6.85□□□□□ -1.31
NEDD9-210ENST00000505589 PMS2P5A8MQ11 134 aa6.85□□□□□ -1.31
NEDD9-210ENST00000505589 IFNA7P01567 189 aa6.85□□□□□ -1.31
NEDD9-210ENST00000505589 ORM2P19652 201 aa6.85□□□□□ -1.31
NEDD9-210ENST00000505589 XGP55808 180 aa6.85□□□□□ -1.31
NEDD9-210ENST00000505589 SLAQ13239 276 aa6.85□□□□□ -1.31
NEDD9-210ENST00000505589 LCE2CQ5TA81 110 aa6.85□□□□□ -1.31
NEDD9-210ENST00000505589 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.85□□□□□ -1.31
NEDD9-210ENST00000505589 BAP18Q8IXM2 172 aa6.85□□□□□ -1.31
NEDD9-210ENST00000505589 THAP8Q8NA92 274 aa6.85□□□□□ -1.31
NEDD9-210ENST00000505589 OR8A1Q8NGG7 326 aa6.85□□□□□ -1.31
NEDD9-210ENST00000505589 C20orf173Q96LM9 149 aa6.85□□□□□ -1.31
NEDD9-210ENST00000505589 GGACTQ9BVM4 153 aa6.85□□□□□ -1.31
NEDD9-210ENST00000505589 ARV1Q9H2C2 271 aa6.85□□□□□ -1.31
NEDD9-210ENST00000505589 SLC25A32Q9H2D1 315 aa6.85□□□□□ -1.31
NEDD9-210ENST00000505589 DMBT1Q9UGM3 2413 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-210ENST00000505589 TRAV12-2A0A075B6T6 113 aa6.84□□□□□ -1.31
NEDD9-210ENST00000505589 A0A0J9YY99 117 aa6.84□□□□□ -1.31
NEDD9-210ENST00000505589 PRSS46E5RG02 174 aa6.84□□□□□ -1.31
NEDD9-210ENST00000505589 PRM2P04554 102 aa6.84□□□□□ -1.31
NEDD9-210ENST00000505589 LINC00315P59091 139 aa6.84□□□□□ -1.31
NEDD9-210ENST00000505589 HIST1H1AQ02539 215 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-210ENST00000505589 ICAM4Q14773 271 aa6.84□□□□□ -1.31
NEDD9-210ENST00000505589 PSG3Q16557 428 aa6.84□□□□□ -1.31
NEDD9-210ENST00000505589 ATP6V1FQ16864 119 aa6.84□□□□□ -1.31
NEDD9-210ENST00000505589 VWC2Q2TAL6 325 aa6.84□□□□□ -1.31
NEDD9-210ENST00000505589 OR10P1Q8NGE3 313 aa6.84□□□□□ -1.31
NEDD9-210ENST00000505589 RNASE8Q8TDE3 154 aaKnown RBP6.84□□□□□ -1.31
NEDD9-210ENST00000505589 C18orf15Q96N68 181 aa6.84□□□□□ -1.31
NEDD9-210ENST00000505589 UHRF2Q96PU4 802 aa6.84□□□□□ -1.31
NEDD9-210ENST00000505589 PARD6GQ9BYG4 376 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-210ENST00000505589 UQCC1Q9NVA1 299 aa6.84□□□□□ -1.31
NEDD9-210ENST00000505589 FAT1Q14517 4588 aa6.83□□□□□ -1.32
NEDD9-210ENST00000505589 UBE2L5PA0A1B0GUS4 154 aa6.83□□□□□ -1.32
NEDD9-210ENST00000505589 FNDC10F2Z333 226 aa6.83□□□□□ -1.32
NEDD9-210ENST00000505589 EIF5AL1Q6IS14 154 aaKnown RBP6.83□□□□□ -1.32
NEDD9-210ENST00000505589 ALKAL2Q6UX46 152 aa6.83□□□□□ -1.32
NEDD9-210ENST00000505589 LINC00612Q8N6U2 182 aa6.83□□□□□ -1.32
NEDD9-210ENST00000505589 C17orf77Q96MU5 243 aa6.83□□□□□ -1.32
NEDD9-210ENST00000505589 SLC25A39Q9BZJ4 359 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-210ENST00000505589 GCSHP23434 173 aa6.82□□□□□ -1.32
NEDD9-210ENST00000505589 SELENOTP62341 195 aa6.82□□□□□ -1.32
NEDD9-210ENST00000505589 DAZ2Q13117 558 aaKnown RBP6.82□□□□□ -1.32
NEDD9-210ENST00000505589 Q6ZSN1 163 aa6.82□□□□□ -1.32
NEDD9-210ENST00000505589 HSD17B11Q8NBQ5 300 aa6.82□□□□□ -1.32
NEDD9-210ENST00000505589 TMED6Q8WW62 240 aa6.82□□□□□ -1.32
NEDD9-210ENST00000505589 KRTAP1-5Q9BYS1 174 aa6.82□□□□□ -1.32
NEDD9-210ENST00000505589 WDR61Q9GZS3 305 aaKnown RBP6.82□□□□□ -1.32
NEDD9-210ENST00000505589 HIGD1AQ9Y241 93 aa6.82□□□□□ -1.32
NEDD9-210ENST00000505589 TRGV2A0A075B6R0 118 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 TRAV8-2A0A0B4J237 113 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 GAGE12BA1L429 117 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 MPDU1O75352 247 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 HYPMO75409 117 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 GAGE7O76087 117 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 SEC11BP0C7V7 166 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 GAGE12FP0CL80 117 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 GAGE12GP0CL81 117 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 GAGE12IP0CL82 117 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 ATP6V0CP27449 155 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 AKR1C1Q04828 323 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 SERTAD4-AS1Q5TG53 156 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 PXDC1Q5TGL8 231 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 RNF182Q8N6D2 247 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 SCGB1C1Q8TD33 95 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 RPUSD4Q96CM3 377 aaKnown RBP6.81□□□□□ -1.32
NEDD9-210ENST00000505589 PYGO2Q9BRQ0 406 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 SLC50A1Q9BRV3 221 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 PSMG3Q9BT73 122 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-210ENST00000505589 SH3BGRL3Q9H299 93 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 WDR83OSQ9Y284 106 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 TIMM9Q9Y5J7 89 aa6.81□□□□□ -1.32
NEDD9-210ENST00000505589 IGKV1OR2-108A0A075B7D4 117 aa6.8□□□□□ -1.32
NEDD9-210ENST00000505589 A0A087X0K7 114 aa6.8□□□□□ -1.32
NEDD9-210ENST00000505589 SMCO3A2RU48 225 aa6.8□□□□□ -1.32
NEDD9-210ENST00000505589 HOXA5P20719 270 aa6.8□□□□□ -1.32
NEDD9-210ENST00000505589 FGF7P21781 194 aa6.8□□□□□ -1.32
NEDD9-210ENST00000505589 PLP1P60201 277 aa6.8□□□□□ -1.32
NEDD9-210ENST00000505589 RAB14P61106 215 aa6.8□□□□□ -1.32
NEDD9-210ENST00000505589 CLLU1Q5K131 121 aa6.8□□□□□ -1.32
NEDD9-210ENST00000505589 FAM74A1Q5RGS3 127 aa6.8□□□□□ -1.32
NEDD9-210ENST00000505589 LCN15Q6UWW0 184 aa6.8□□□□□ -1.32
NEDD9-210ENST00000505589 Q6ZRN7 208 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-210ENST00000505589 SYT8Q8NBV8 401 aa6.8□□□□□ -1.32
NEDD9-210ENST00000505589 SHANK2-AS3Q9BTD1 123 aa6.8□□□□□ -1.32
NEDD9-210ENST00000505589 ICOSQ9Y6W8 199 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms