RNA–Protein interactions for RNA: ENST00000504994.1

HERC3-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-209ENST00000504994 EXPH5Q8NEV8 1989 aa2.09□□□□□ -2.07
HERC3-209ENST00000504994 A0A096LPI6 279 aa2.09□□□□□ -2.07
HERC3-209ENST00000504994 LOC107986453A0A1B0GWG9 222 aa2.09□□□□□ -2.07
HERC3-209ENST00000504994 CCL16O15467 120 aa2.09□□□□□ -2.07
HERC3-209ENST00000504994 SMIM24O75264 130 aa2.09□□□□□ -2.07
HERC3-209ENST00000504994 CD14P08571 375 aa2.09□□□□□ -2.07
HERC3-209ENST00000504994 HLA-DRB4P13762 266 aa2.09□□□□□ -2.07
HERC3-209ENST00000504994 KDELR1P24390 212 aa2.09□□□□□ -2.07
HERC3-209ENST00000504994 SNRPD3P62318 126 aaKnown RBP2.09□□□□□ -2.07
HERC3-209ENST00000504994 MIR22HGQ0VDD5 57 aa2.09□□□□□ -2.07
HERC3-209ENST00000504994 KRTAP13-1Q8IUC0 172 aa2.09□□□□□ -2.07
HERC3-209ENST00000504994 C4orf3Q8WVX3 66 aa2.09□□□□□ -2.07
HERC3-209ENST00000504994 VPS25Q9BRG1 176 aa2.09□□□□□ -2.07
HERC3-209ENST00000504994 CST11Q9H112 138 aa2.09□□□□□ -2.07
HERC3-209ENST00000504994 DNAJC15Q9Y5T4 150 aa2.09□□□□□ -2.07
HERC3-209ENST00000504994 HLA-DRB4X5D2U9 266 aa2.09□□□□□ -2.07
HERC3-209ENST00000504994 RFX7Q2KHR2 1363 aa2.09□□□□□ -2.08
HERC3-209ENST00000504994 OVOS2A0A0J9YW53 1432 aa2.08□□□□□ -2.08
HERC3-209ENST00000504994 TNS3Q68CZ2 1445 aa2.08□□□□□ -2.08
HERC3-209ENST00000504994 OVOS2Q6IE36 1432 aa2.08□□□□□ -2.08
HERC3-209ENST00000504994 COL1A1P02452 1464 aaPredicted RBP2.08□□□□□ -2.08
HERC3-209ENST00000504994 LOC107984156A0A0G2JMH3 177 aa2.08□□□□□ -2.08
HERC3-209ENST00000504994 TSPAN19P0C672 248 aa2.08□□□□□ -2.08
HERC3-209ENST00000504994 LSM3P62310 102 aaKnown RBP2.08□□□□□ -2.08
HERC3-209ENST00000504994 GLIPR1L1Q6UWM5 242 aa2.08□□□□□ -2.08
HERC3-209ENST00000504994 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.08□□□□□ -2.08
HERC3-209ENST00000504994 FOXI2Q6ZQN5 318 aa2.08□□□□□ -2.08
HERC3-209ENST00000504994 GKN2Q86XP6 184 aa2.08□□□□□ -2.08
HERC3-209ENST00000504994 ARL17AQ8IVW1 177 aa2.08□□□□□ -2.08
HERC3-209ENST00000504994 OR5AS1Q8N127 324 aa2.08□□□□□ -2.08
HERC3-209ENST00000504994 OR4C6Q8NH72 309 aa2.08□□□□□ -2.08
HERC3-209ENST00000504994 OR5AK2Q8NH90 309 aa2.08□□□□□ -2.08
HERC3-209ENST00000504994 PATE1Q8WXA2 126 aa2.08□□□□□ -2.08
HERC3-209ENST00000504994 MAGOHBQ96A72 148 aaKnown RBP2.08□□□□□ -2.08
HERC3-209ENST00000504994 COMMD3Q9UBI1 195 aa2.08□□□□□ -2.08
HERC3-209ENST00000504994 CR1P17927 2039 aa2.07□□□□□ -2.08
HERC3-209ENST00000504994 C3orf85A0A1B0GTC6 90 aa2.07□□□□□ -2.08
HERC3-209ENST00000504994 EFCAB10A6NFE3 127 aa2.07□□□□□ -2.08
HERC3-209ENST00000504994 MRPS14O60783 128 aaKnown RBP2.07□□□□□ -2.08
HERC3-209ENST00000504994 FREM3P0C091 2139 aa2.07□□□□□ -2.08
HERC3-209ENST00000504994 ZCCHC23Q6ZST2 131 aa2.07□□□□□ -2.08
HERC3-209ENST00000504994 TEN1Q86WV5 123 aa2.07□□□□□ -2.08
HERC3-209ENST00000504994 LINC00052Q96N35 136 aa2.07□□□□□ -2.08
HERC3-209ENST00000504994 KLK9Q9UKQ9 250 aa2.07□□□□□ -2.08
HERC3-209ENST00000504994 PAIP2BQ9ULR5 123 aaKnown RBP2.07□□□□□ -2.08
HERC3-209ENST00000504994 USP54Q70EL1 1684 aa2.06□□□□□ -2.08
HERC3-209ENST00000504994 J3QR89 54 aa2.06□□□□□ -2.08
HERC3-209ENST00000504994 K7EP13 123 aa2.06□□□□□ -2.08
HERC3-209ENST00000504994 CD3DP04234 171 aa2.06□□□□□ -2.08
HERC3-209ENST00000504994 HIST1H1BP16401 226 aaKnown RBP2.06□□□□□ -2.08
HERC3-209ENST00000504994 PCBD1P61457 104 aa2.06□□□□□ -2.08
HERC3-209ENST00000504994 MMGT1Q8N4V1 131 aa2.06□□□□□ -2.08
HERC3-209ENST00000504994 LPAR5Q9H1C0 372 aa2.06□□□□□ -2.08
HERC3-209ENST00000504994 CDC42SE1Q9NRR8 79 aa2.06□□□□□ -2.08
HERC3-209ENST00000504994 ORMDL1Q9P0S3 153 aa2.06□□□□□ -2.08
HERC3-209ENST00000504994 ERG28Q9UKR5 140 aa2.06□□□□□ -2.08
HERC3-209ENST00000504994 DISP2A7MBM2 1401 aa2.06□□□□□ -2.08
HERC3-209ENST00000504994 KDM6AO15550 1401 aaPredicted RBP2.06□□□□□ -2.08
HERC3-209ENST00000504994 TRPM7Q96QT4 1865 aa2.05□□□□□ -2.08
HERC3-209ENST00000504994 MYH6P13533 1939 aa2.05□□□□□ -2.08
HERC3-209ENST00000504994 FAM236AA0A1B0GUQ0 79 aa2.05□□□□□ -2.08
HERC3-209ENST00000504994 FAM236BA0A1B0GV22 79 aa2.05□□□□□ -2.08
HERC3-209ENST00000504994 K7ERU9 68 aa2.05□□□□□ -2.08
HERC3-209ENST00000504994 RPS25P62851 125 aaKnown RBP2.05□□□□□ -2.08
HERC3-209ENST00000504994 CTAGE3PQ8IX95 158 aa2.05□□□□□ -2.08
HERC3-209ENST00000504994 OTOSQ8NHW6 89 aa2.05□□□□□ -2.08
HERC3-209ENST00000504994 ZNF563Q8TA94 476 aa2.05□□□□□ -2.08
HERC3-209ENST00000504994 KRTAP4-3Q9BYR4 195 aa2.05□□□□□ -2.08
HERC3-209ENST00000504994 KDM5CP41229 1560 aa2.05□□□□□ -2.08
HERC3-209ENST00000504994 TNRC6BQ9UPQ9 1833 aaKnown RBP2.05□□□□□ -2.08
HERC3-209ENST00000504994 MYH13Q9UKX3 1938 aa2.05□□□□□ -2.08
HERC3-209ENST00000504994 F8W1H4 67 aa2.04□□□□□ -2.08
HERC3-209ENST00000504994 CKS2P33552 79 aa2.04□□□□□ -2.08
HERC3-209ENST00000504994 ETV6P41212 452 aa2.04□□□□□ -2.08
HERC3-209ENST00000504994 HELZP42694 1942 aaKnown RBP2.04□□□□□ -2.08
HERC3-209ENST00000504994 DNAJB13P59910 316 aa2.04□□□□□ -2.08
HERC3-209ENST00000504994 ARHGAP31Q2M1Z3 1444 aa2.04□□□□□ -2.08
HERC3-209ENST00000504994 C10orf111Q8N326 155 aa2.04□□□□□ -2.08
HERC3-209ENST00000504994 PRG4Q92954 1404 aaPredicted RBP2.04□□□□□ -2.08
HERC3-209ENST00000504994 METTL1Q9UBP6 276 aaKnown RBP2.04□□□□□ -2.08
HERC3-209ENST00000504994 MPC1Q9Y5U8 109 aa2.04□□□□□ -2.08
HERC3-209ENST00000504994 CHD3Q12873 2000 aaKnown RBP2.03□□□□□ -2.08
HERC3-209ENST00000504994 TNRC6AQ8NDV7 1962 aaKnown RBP2.03□□□□□ -2.08
HERC3-209ENST00000504994 ALPK3Q96L96 1907 aa2.03□□□□□ -2.08
HERC3-209ENST00000504994 SIP14410 1827 aa2.03□□□□□ -2.08
HERC3-209ENST00000504994 TRBV6-4A0A1B0GX49 114 aa2.03□□□□□ -2.08
HERC3-209ENST00000504994 A6NN06 94 aa2.03□□□□□ -2.08
HERC3-209ENST00000504994 NCS1P62166 190 aa2.03□□□□□ -2.08
HERC3-209ENST00000504994 FAM74A1Q5RGS3 127 aa2.03□□□□□ -2.08
HERC3-209ENST00000504994 ZNF431Q8TF32 576 aaPredicted RBP2.03□□□□□ -2.08
HERC3-209ENST00000504994 NAA38Q9BRA0 125 aaKnown RBP2.03□□□□□ -2.08
HERC3-209ENST00000504994 INTS1Q8N201 2190 aaKnown RBP2.03□□□□□ -2.08
HERC3-209ENST00000504994 CASP8AP2Q9UKL3 1982 aa2.03□□□□□ -2.08
HERC3-209ENST00000504994 ARFGEF3Q5TH69 2177 aa2.02□□□□□ -2.09
HERC3-209ENST00000504994 NPFFO15130 113 aa2.02□□□□□ -2.09
HERC3-209ENST00000504994 HCRTO43612 131 aa2.02□□□□□ -2.09
HERC3-209ENST00000504994 COX7CP15954 63 aa2.02□□□□□ -2.09
HERC3-209ENST00000504994 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
HERC3-209ENST00000504994 ASB16-AS1Q495Z4 193 aa2.02□□□□□ -2.09
HERC3-209ENST00000504994 CLLU1Q5K131 121 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms