RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 LRRC29Q8WV35 223 aa3.2□□□□□ -1.9
RFC1-208ENST00000504849 TTTY12Q9BZ98 90 aa3.2□□□□□ -1.9
RFC1-208ENST00000504849 SCRT2Q9NQ03 307 aa3.2□□□□□ -1.9
RFC1-208ENST00000504849 ZNF355PQ9NSJ1 428 aa3.2□□□□□ -1.9
RFC1-208ENST00000504849 CALYQ9NYX4 217 aa3.2□□□□□ -1.9
RFC1-208ENST00000504849 U3KQA8 63 aa3.2□□□□□ -1.9
RFC1-208ENST00000504849 DOCK8Q8NF50 2099 aa3.2□□□□□ -1.9
RFC1-208ENST00000504849 COL12A1Q99715 3063 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 PCNX3Q9H6A9 2034 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.19□□□□□ -1.9
RFC1-208ENST00000504849 TRGV5A0A0B4J1U4 118 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 TEX50A0A1B0GTY4 177 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 A0A1B0GWB2 263 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 TCRBV4S1A1TA0A5B7 111 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 HIGD1CA8MV81 97 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 INS-IGF2F8WCM5 200 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 H3BRM9 83 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 J3QKU1 62 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 J3QR89 54 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 IGLV2-8P01709 118 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 SLC25A5P05141 298 aaKnown RBP3.19□□□□□ -1.9
RFC1-208ENST00000504849 SMIM17P0DL12 118 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 CT45A6P0DMU7 189 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 CT45A5P0DMU8 189 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 CT45A7P0DMV0 189 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 COX8AP10176 69 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 SCGB1A1P11684 91 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 CCL4P13236 92 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 HTR1DP28221 377 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 MPV17P39210 176 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 CEACAM3P40198 252 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 CSN1S1P47710 185 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 HSD52Q0P140 79 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 MPV17L2Q567V2 206 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 RPL39P5Q59GN2 51 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 CT45A1Q5HYN5 189 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 SPINK14Q6IE38 97 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 Q6ZRP5 223 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 FA2HQ7L5A8 372 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 S100A7AQ86SG5 101 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 CD177Q8N6Q3 437 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 OR2Z1Q8NG97 314 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 OR10X1Q8NGY0 326 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 CT45A3Q8NHU0 189 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 H1FXQ92522 213 aaKnown RBP3.19□□□□□ -1.9
RFC1-208ENST00000504849 GPR82Q96P67 336 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 NDFIP1Q9BT67 221 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 SLC25A2Q9BXI2 301 aa3.19□□□□□ -1.9
RFC1-208ENST00000504849 THADAQ6YHU6 1953 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 TNRC6AQ8NDV7 1962 aaKnown RBP3.18□□□□□ -1.9
RFC1-208ENST00000504849 IGHV4-30-2A0A087WSY4 118 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 LOC102724200A0A096LPH7 203 aaPredicted RBP3.18□□□□□ -1.9
RFC1-208ENST00000504849 TRAV3A0A0B4J244 114 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 MUC21A0A0G2JKD1 596 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 TRBV6-1A0A0K0K1D8 114 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 MUC21A0A140T8X8 626 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 C7orf71A4D174 169 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 OR2T8A6NH00 312 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 SRRM5B3KS81 715 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 E9PLD3 99 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 K7EP34 96 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 CORTO00230 105 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 CCL21O00585 134 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 IGLC1P0CG04 106 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 SAA2P0DJI9 122 aaPredicted RBP3.18□□□□□ -1.9
RFC1-208ENST00000504849 RNASE2P10153 161 aaKnown RBP3.18□□□□□ -1.9
RFC1-208ENST00000504849 UCNP55089 124 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 KRTAP10-8P60410 259 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 PSG9Q00887 426 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 VMA21Q3ZAQ7 101 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 TMEM97Q5BJF2 176 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 LINC01545Q5VT33 79 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 AMMECR1LQ6DCA0 310 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 FAM53AQ6NSI3 398 aaPredicted RBP3.18□□□□□ -1.9
RFC1-208ENST00000504849 ZNF826PQ6ZT77 177 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 Q6ZT83 130 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 SSX8Q7RTT4 187 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 TCF24Q7RTU0 167 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 SPATA12Q7Z6I5 190 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 C11orf53Q8IXP5 236 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 VKORC1L1Q8N0U8 176 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 C5orf17Q8NAS9 161 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 OR4X2Q8NGF9 303 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 OR10AG1Q8NH19 301 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 OCR1Q9BZK8 76 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 CLEC5AQ9NY25 188 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 EPDR1Q9UM22 224 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 RNF24Q9Y225 148 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 POLQO75417 2590 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 ARID1AO14497 2285 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 ALPK2Q86TB3 2170 aa3.18□□□□□ -1.9
RFC1-208ENST00000504849 DNHD1Q96M86 4753 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 IGHV3-64DA0A0J9YX35 117 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 TEX48A0A1B0GUV7 120 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 A0A1W2PRF3 423 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 A0A1W2PRM7 423 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 hADV38S2A0JD32 116 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 PGPA6NDG6 321 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 MRPS12O15235 138 aaKnown RBP3.17□□□□□ -1.9
RFC1-208ENST00000504849 BUB3O43684 328 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms