RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 PPP1R17O96001 155 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 SAA1P0DJI8 122 aaPredicted RBP2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 COX6A1P12074 109 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 IGFBP3P17936 291 aaPredicted RBP2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 KLF17Q5JT82 389 aaPredicted RBP2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 POM121L12Q8N7R1 296 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 TEX45Q8NA69 505 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 GTSF1Q8WW33 167 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 MRPL20Q9BYC9 149 aaKnown RBP2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 IFI27L2Q9H2X8 130 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 CHCHD2Q9Y6H1 151 aaPredicted RBP2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 U3KQA8 63 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 TRAV3A0A0B4J244 114 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 H3BRM9 83 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 IGHV4-39P01824 125 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 ID3Q02535 119 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 KLRD1Q13241 179 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 Q6ZQT7 251 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 OR2K2Q8NGT1 345 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM110DQ8TAY7 271 aaPredicted RBP2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 SCGB3A1Q96QR1 104 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 SIGLEC8Q9NYZ4 499 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 FASNP49327 2511 aaKnown RBP2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 A0A0G2JRQ6 117 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 SPINK8P0C7L1 97 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 OR9G9P0C7N8 305 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 RSPO1Q2MKA7 263 aaPredicted RBP2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM159AQ6UWV7 190 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 PPP1R32Q7Z5V6 425 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 NUP37Q8NFH4 326 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 PRSS29PA6NIE9 313 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 SS18L1O75177 396 aaPredicted RBP2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 LYPD3O95274 346 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 FOXI1Q12951 378 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 LINC00114Q6XXX2 140 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 Q6ZRM9 215 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 GTSCR1Q86UQ5 136 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 NFAM1Q8NET5 270 aaPredicted RBP2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 HS3ST6Q96QI5 342 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 GGTLC1Q9BX51 225 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 Q9H3A6 140 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 ANAPC10Q9UM13 185 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 POLQO75417 2590 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 TANC2Q9HCD6 1990 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 IGKV1-27A0A075B6S5 117 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 TRAV4A0A0B4J268 109 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 TMEM262E9PQX1 116 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 NTN3O00634 580 aaPredicted RBP2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 PSPNO60542 156 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 WISP1O95388 367 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 IGKV1D-33P01593 117 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 IGKV1-33P01594 117 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 IGLC6P0CF74 106 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 LEPP41159 167 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 CLEC19AQ6UXS0 136 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 LINC00596Q86U02 117 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 PCP2Q8IVA1 136 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 CIARTQ8N365 385 aaPredicted RBP2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 FLVCR1-AS1Q8TAF5 88 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 ARPC1AQ92747 370 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 TPSG1Q9NRR2 321 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 ZNRD1Q9P1U0 126 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 METRNQ9UJH8 293 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 KLK5Q9Y337 293 aaPredicted RBP2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 BAHCC1Q9P281 2608 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 TRAV9-2A0A087WT02 112 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM90A10PA6NDY2 464 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM90A18PA6NE21 464 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM181BA6NEQ2 426 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM90A16PA6NEW6 464 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM90A7PA6NKC0 464 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM90A22PA8MWA6 464 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM90A12PA8MX19 464 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM90A5PA8MXJ8 464 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM90A23PA8MXZ1 464 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 NPIPB6E9PJ23 425 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 SMKR1H3BMG3 65 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM90A15PP0C7V4 464 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM90A14PP0C7W9 464 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 C10orf128Q5T292 105 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 RPP21Q9H633 154 aaKnown RBP2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 ST20Q9HBF5 79 aa2.94□□□□□ -1.94
PCDH11X-208ENST00000504220 KMT2BQ9UMN6 2715 aaPredicted RBP2.93□□□□□ -1.94
PCDH11X-208ENST00000504220 TRAV2A0A0B4J234 112 aa2.93□□□□□ -1.94
PCDH11X-208ENST00000504220 TRAV1-1A0A0B4J248 108 aa2.93□□□□□ -1.94
PCDH11X-208ENST00000504220 GAGE12JA6NER3 117 aa2.93□□□□□ -1.94
PCDH11X-208ENST00000504220 GAGE7O76087 117 aa2.93□□□□□ -1.94
PCDH11X-208ENST00000504220 DNAL4O96015 105 aa2.93□□□□□ -1.94
PCDH11X-208ENST00000504220 GAGE12FP0CL80 117 aa2.93□□□□□ -1.94
PCDH11X-208ENST00000504220 GAGE12GP0CL81 117 aa2.93□□□□□ -1.94
PCDH11X-208ENST00000504220 GAGE12IP0CL82 117 aa2.93□□□□□ -1.94
PCDH11X-208ENST00000504220 SAA2P0DJI9 122 aaPredicted RBP2.93□□□□□ -1.94
PCDH11X-208ENST00000504220 IGLV3-21P80748 117 aaPredicted RBP2.93□□□□□ -1.94
PCDH11X-208ENST00000504220 FOXF2Q12947 444 aa2.93□□□□□ -1.94
PCDH11X-208ENST00000504220 GAGE4Q13068 117 aa2.93□□□□□ -1.94
PCDH11X-208ENST00000504220 C17orf82Q86X59 251 aaPredicted RBP2.93□□□□□ -1.94
PCDH11X-208ENST00000504220 SBSPONQ8IVN8 264 aa2.93□□□□□ -1.94
PCDH11X-208ENST00000504220 ORMDL3Q8N138 153 aa2.93□□□□□ -1.94
PCDH11X-208ENST00000504220 C10orf126Q8N4M7 172 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms