RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 NPVFQ9HCQ7 196 aa10.44□□□□□ -0.74
PDLIM7-210ENST00000503827 VCX3AQ9NNX9 186 aa10.44□□□□□ -0.74
PDLIM7-210ENST00000503827 IGHV1OR15-1A0A075B7D0 117 aa10.43□□□□□ -0.74
PDLIM7-210ENST00000503827 H3BQ15 152 aa10.43□□□□□ -0.74
PDLIM7-210ENST00000503827 GOSR2O14653 212 aa10.43□□□□□ -0.74
PDLIM7-210ENST00000503827 OPCMLQ14982 345 aa10.43□□□□□ -0.74
PDLIM7-210ENST00000503827 GUK1Q16774 197 aa10.43□□□□□ -0.74
PDLIM7-210ENST00000503827 CIRBP-AS1Q8TBR5 109 aa10.43□□□□□ -0.74
PDLIM7-210ENST00000503827 SMIM4Q8WVI0 70 aa10.43□□□□□ -0.74
PDLIM7-210ENST00000503827 FAM19A4Q96LR4 140 aa10.43□□□□□ -0.74
PDLIM7-210ENST00000503827 LINC00477Q96M19 166 aa10.43□□□□□ -0.74
PDLIM7-210ENST00000503827 DNAJC4Q9NNZ3 241 aa10.43□□□□□ -0.74
PDLIM7-210ENST00000503827 LECT2O14960 151 aa10.42□□□□□ -0.74
PDLIM7-210ENST00000503827 COX7A2P2O60397 106 aa10.42□□□□□ -0.74
PDLIM7-210ENST00000503827 IGLV2-8P01709 118 aa10.42□□□□□ -0.74
PDLIM7-210ENST00000503827 IGHV3-30P01768 117 aa10.42□□□□□ -0.74
PDLIM7-210ENST00000503827 IGHV3-33P01772 117 aa10.42□□□□□ -0.74
PDLIM7-210ENST00000503827 IGHV3-30-3P0DP02 117 aa10.42□□□□□ -0.74
PDLIM7-210ENST00000503827 IGHV3-30-5P0DP03 117 aa10.42□□□□□ -0.74
PDLIM7-210ENST00000503827 RRAS2P62070 204 aaPredicted RBP10.42□□□□□ -0.74
PDLIM7-210ENST00000503827 SLC38A11Q08AI6 406 aa10.42□□□□□ -0.74
PDLIM7-210ENST00000503827 ZNF546Q86UE3 836 aa10.42□□□□□ -0.74
PDLIM7-210ENST00000503827 NHLRC2Q8NBF2 726 aa10.42□□□□□ -0.74
PDLIM7-210ENST00000503827 OR10P1Q8NGE3 313 aa10.42□□□□□ -0.74
PDLIM7-210ENST00000503827 RABL2BQ9UNT1 228 aa10.42□□□□□ -0.74
PDLIM7-210ENST00000503827 CRISP2P16562 243 aa10.41□□□□□ -0.74
PDLIM7-210ENST00000503827 LAGE3Q14657 143 aa10.41□□□□□ -0.74
PDLIM7-210ENST00000503827 OR10J3Q5JRS4 329 aa10.41□□□□□ -0.74
PDLIM7-210ENST00000503827 MRPL53Q96EL3 112 aaKnown RBP10.41□□□□□ -0.74
PDLIM7-210ENST00000503827 FUNDC2Q9BWH2 189 aa10.41□□□□□ -0.74
PDLIM7-210ENST00000503827 MCUBQ9NWR8 336 aa10.41□□□□□ -0.74
PDLIM7-210ENST00000503827 PSENENQ9NZ42 101 aa10.41□□□□□ -0.74
PDLIM7-210ENST00000503827 RBFOX3A6NFN3 312 aa10.4□□□□□ -0.74
PDLIM7-210ENST00000503827 FNDC10F2Z333 226 aa10.4□□□□□ -0.74
PDLIM7-210ENST00000503827 NMBP08949 121 aa10.4□□□□□ -0.74
PDLIM7-210ENST00000503827 RPL37AP61513 92 aaKnown RBP10.4□□□□□ -0.74
PDLIM7-210ENST00000503827 ZNF846Q147U1 533 aa10.4□□□□□ -0.74
PDLIM7-210ENST00000503827 C10orf113Q5VZT2 155 aa10.4□□□□□ -0.74
PDLIM7-210ENST00000503827 TMEM37Q8WXS4 190 aa10.4□□□□□ -0.74
PDLIM7-210ENST00000503827 AGPAT4-IT1Q9H0P7 198 aa10.4□□□□□ -0.74
PDLIM7-210ENST00000503827 CCDC59Q9P031 241 aaKnown RBP10.4□□□□□ -0.74
PDLIM7-210ENST00000503827 MGAT4CQ9UBM8 478 aa10.4□□□□□ -0.74
PDLIM7-210ENST00000503827 LOC100131303A0A0U1RQF7 123 aa10.39□□□□□ -0.75
PDLIM7-210ENST00000503827 ANKRD20A5PA0PJZ0 165 aa10.39□□□□□ -0.75
PDLIM7-210ENST00000503827 M0R3E3 92 aa10.39□□□□□ -0.75
PDLIM7-210ENST00000503827 ZNF253O75346 499 aa10.39□□□□□ -0.75
PDLIM7-210ENST00000503827 VAMP1P23763 118 aa10.39□□□□□ -0.75
PDLIM7-210ENST00000503827 POLR2GP62487 172 aaKnown RBP eCLIP10.39□□□□□ -0.75
PDLIM7-210ENST00000503827 TMEM128Q5BJH2 165 aa10.39□□□□□ -0.75
PDLIM7-210ENST00000503827 RASL10AQ92737 203 aa10.39□□□□□ -0.75
PDLIM7-210ENST00000503827 SRRQ9GZT4 340 aa10.39□□□□□ -0.75
PDLIM7-210ENST00000503827 AGPAT2O15120 278 aa10.38□□□□□ -0.75
PDLIM7-210ENST00000503827 RGS5O15539 181 aa10.38□□□□□ -0.75
PDLIM7-210ENST00000503827 HOXB5P09067 269 aa10.38□□□□□ -0.75
PDLIM7-210ENST00000503827 MT1HL1P0DM35 61 aa10.38□□□□□ -0.75
PDLIM7-210ENST00000503827 Q6ZQT7 251 aa10.38□□□□□ -0.75
PDLIM7-210ENST00000503827 MIXL1Q9H2W2 232 aa10.38□□□□□ -0.75
PDLIM7-210ENST00000503827 PRELID1Q9Y255 219 aa10.38□□□□□ -0.75
PDLIM7-210ENST00000503827 LRP2P98164 4655 aa10.38□□□□□ -0.75
PDLIM7-210ENST00000503827 PKHD1L1Q86WI1 4243 aa10.38□□□□□ -0.75
PDLIM7-210ENST00000503827 TRAV4A0A0B4J268 109 aa10.37□□□□□ -0.75
PDLIM7-210ENST00000503827 CTDSPLO15194 276 aa10.37□□□□□ -0.75
PDLIM7-210ENST00000503827 CCNKO75909 580 aa10.37□□□□□ -0.75
PDLIM7-210ENST00000503827 HNRNPA3P51991 378 aaKnown RBP10.37□□□□□ -0.75
PDLIM7-210ENST00000503827 TMEM78Q5T7P6 136 aa10.37□□□□□ -0.75
PDLIM7-210ENST00000503827 PRR9Q5T870 116 aa10.37□□□□□ -0.75
PDLIM7-210ENST00000503827 ZFAND2AQ8N6M9 145 aa10.37□□□□□ -0.75
PDLIM7-210ENST00000503827 OR4C5Q8NGB2 326 aa10.37□□□□□ -0.75
PDLIM7-210ENST00000503827 DAZAP1Q96EP5 407 aaKnown RBP10.37□□□□□ -0.75
PDLIM7-210ENST00000503827 SPXQ9BT56 116 aa10.37□□□□□ -0.75
PDLIM7-210ENST00000503827 A0A087WXM4 84 aa10.36□□□□□ -0.75
PDLIM7-210ENST00000503827 TRAV8-3A0A0A6YYJ7 113 aa10.36□□□□□ -0.75
PDLIM7-210ENST00000503827 IGLV2-11P01706 119 aa10.36□□□□□ -0.75
PDLIM7-210ENST00000503827 PFN1P07737 140 aaKnown RBP10.36□□□□□ -0.75
PDLIM7-210ENST00000503827 METTL15P1P0C7V9 234 aa10.36□□□□□ -0.75
PDLIM7-210ENST00000503827 ID3Q02535 119 aa10.36□□□□□ -0.75
PDLIM7-210ENST00000503827 IL18Q14116 193 aa10.36□□□□□ -0.75
PDLIM7-210ENST00000503827 C9orf47Q6ZRZ4 202 aa10.36□□□□□ -0.75
PDLIM7-210ENST00000503827 BAALCQ8WXS3 180 aa10.36□□□□□ -0.75
PDLIM7-210ENST00000503827 TRBV19A0A075B6N1 114 aa10.35□□□□□ -0.75
PDLIM7-210ENST00000503827 FABP12A6NFH5 140 aa10.35□□□□□ -0.75
PDLIM7-210ENST00000503827 HIST1H1EP10412 219 aaKnown RBP10.35□□□□□ -0.75
PDLIM7-210ENST00000503827 ASIPP42127 132 aa10.35□□□□□ -0.75
PDLIM7-210ENST00000503827 LELP1Q5T871 98 aa10.35□□□□□ -0.75
PDLIM7-210ENST00000503827 Q6ZRG5 221 aa10.35□□□□□ -0.75
PDLIM7-210ENST00000503827 RAB2BQ8WUD1 216 aa10.35□□□□□ -0.75
PDLIM7-210ENST00000503827 SMIM8Q96KF7 97 aa10.35□□□□□ -0.75
PDLIM7-210ENST00000503827 SSSCA1O60232 199 aa10.34□□□□□ -0.75
PDLIM7-210ENST00000503827 MUC21Q5SSG8 566 aa10.34□□□□□ -0.75
PDLIM7-210ENST00000503827 TMEM14EPQ6UXP3 125 aa10.34□□□□□ -0.75
PDLIM7-210ENST00000503827 Q8N976 141 aa10.34□□□□□ -0.75
PDLIM7-210ENST00000503827 RABL2AQ9UBK7 228 aaPredicted RBP10.34□□□□□ -0.75
PDLIM7-210ENST00000503827 COX11Q9Y6N1 276 aa10.34□□□□□ -0.75
PDLIM7-210ENST00000503827 SFT2D2O95562 160 aa10.33□□□□□ -0.76
PDLIM7-210ENST00000503827 TOR2AQ5JU69 321 aa10.33□□□□□ -0.76
PDLIM7-210ENST00000503827 OR1L4Q8NGR5 311 aa10.33□□□□□ -0.76
PDLIM7-210ENST00000503827 ATP6V0E2Q8NHE4 81 aa10.33□□□□□ -0.76
PDLIM7-210ENST00000503827 MGST2Q99735 147 aa10.33□□□□□ -0.76
PDLIM7-210ENST00000503827 AAMDCQ9H7C9 122 aa10.33□□□□□ -0.76
PDLIM7-210ENST00000503827 ZNF492Q9P255 531 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms