RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 PRAC2D3DTV9 90 aa16.31■□□□□ 0.2
UBE2D3-216ENST00000503742 IQCJQ1A5X6 159 aa16.31■□□□□ 0.2
UBE2D3-216ENST00000503742 CT45A10P0DMU9 189 aa16.3■□□□□ 0.2
UBE2D3-216ENST00000503742 Q0VG73 95 aa16.3■□□□□ 0.2
UBE2D3-216ENST00000503742 TMEM256Q8N2U0 113 aa16.3■□□□□ 0.2
UBE2D3-216ENST00000503742 PGLYRP4Q96LB8 373 aa16.29■□□□□ 0.2
UBE2D3-216ENST00000503742 PRO1933Q9H354 126 aa16.29■□□□□ 0.2
UBE2D3-216ENST00000503742 ITPR3Q14573 2671 aa16.29■□□□□ 0.2
UBE2D3-216ENST00000503742 A8MWP6 167 aa16.29■□□□□ 0.2
UBE2D3-216ENST00000503742 APCSP02743 223 aa16.29■□□□□ 0.2
UBE2D3-216ENST00000503742 SLAQ13239 276 aa16.29■□□□□ 0.2
UBE2D3-216ENST00000503742 Q8TAT8 98 aa16.29■□□□□ 0.2
UBE2D3-216ENST00000503742 KIAA1644Q3SXP7 199 aa16.28■□□□□ 0.2
UBE2D3-216ENST00000503742 A0A1W2PS18 150 aa16.27■□□□□ 0.2
UBE2D3-216ENST00000503742 NUPR1O60356 82 aa16.27■□□□□ 0.2
UBE2D3-216ENST00000503742 LINC00310P59036 64 aa16.27■□□□□ 0.2
UBE2D3-216ENST00000503742 HBBP68871 147 aa16.27■□□□□ 0.2
UBE2D3-216ENST00000503742 GPHB5Q86YW7 130 aa16.27■□□□□ 0.2
UBE2D3-216ENST00000503742 CLEC5AQ9NY25 188 aa16.27■□□□□ 0.2
UBE2D3-216ENST00000503742 PDZD2O15018 2839 aa16.27■□□□□ 0.2
UBE2D3-216ENST00000503742 HELZ2Q9BYK8 2649 aaKnown RBP16.27■□□□□ 0.2
UBE2D3-216ENST00000503742 SH2D1AO60880 128 aa16.27■□□□□ 0.19
UBE2D3-216ENST00000503742 ERCC8Q13216 396 aa16.27■□□□□ 0.19
UBE2D3-216ENST00000503742 FAM162BQ5T6X4 162 aa16.27■□□□□ 0.19
UBE2D3-216ENST00000503742 ZNF664Q8N3J9 261 aa16.27■□□□□ 0.19
UBE2D3-216ENST00000503742 SIGLECL1Q8N7X8 197 aa16.27■□□□□ 0.19
UBE2D3-216ENST00000503742 MYOZ3Q8TDC0 251 aa16.27■□□□□ 0.19
UBE2D3-216ENST00000503742 NDUFAF3Q9BU61 184 aa16.27■□□□□ 0.19
UBE2D3-216ENST00000503742 IGHV7-4-1A0A0J9YVY3 117 aa16.26■□□□□ 0.19
UBE2D3-216ENST00000503742 ESDP10768 282 aa16.26■□□□□ 0.19
UBE2D3-216ENST00000503742 CAMPP49913 170 aa16.26■□□□□ 0.19
UBE2D3-216ENST00000503742 FOXE3Q13461 319 aa16.26■□□□□ 0.19
UBE2D3-216ENST00000503742 TEX29Q8N6K0 151 aa16.26■□□□□ 0.19
UBE2D3-216ENST00000503742 C2orf88Q9BSF0 95 aa16.26■□□□□ 0.19
UBE2D3-216ENST00000503742 DAZ1Q9NQZ3 744 aaKnown RBP16.26■□□□□ 0.19
UBE2D3-216ENST00000503742 K7EMT4 169 aa16.26■□□□□ 0.19
UBE2D3-216ENST00000503742 RPLP1P05386 114 aaKnown RBP16.26■□□□□ 0.19
UBE2D3-216ENST00000503742 ELANEP08246 267 aa16.26■□□□□ 0.19
UBE2D3-216ENST00000503742 Q8N2B8 174 aa16.26■□□□□ 0.19
UBE2D3-216ENST00000503742 ZNF80P51504 273 aaPredicted RBP16.25■□□□□ 0.19
UBE2D3-216ENST00000503742 TM4SF20Q53R12 229 aa16.25■□□□□ 0.19
UBE2D3-216ENST00000503742 OR10J3Q5JRS4 329 aa16.25■□□□□ 0.19
UBE2D3-216ENST00000503742 C16orf92Q96LL3 132 aa16.25■□□□□ 0.19
UBE2D3-216ENST00000503742 HAX1O00165 279 aa16.24■□□□□ 0.19
UBE2D3-216ENST00000503742 SOCS3O14543 225 aa16.24■□□□□ 0.19
UBE2D3-216ENST00000503742 SRIP30626 198 aa16.24■□□□□ 0.19
UBE2D3-216ENST00000503742 FAM106AQ4KMX7 169 aa16.24■□□□□ 0.19
UBE2D3-216ENST00000503742 IL17RELQ6ZVW7 336 aa16.24■□□□□ 0.19
UBE2D3-216ENST00000503742 RNF152Q8N8N0 203 aa16.24■□□□□ 0.19
UBE2D3-216ENST00000503742 NDFIP1Q9BT67 221 aa16.24■□□□□ 0.19
UBE2D3-216ENST00000503742 F2Z2F3 143 aa16.24■□□□□ 0.19
UBE2D3-216ENST00000503742 FOXC2Q99958 501 aa16.24■□□□□ 0.19
UBE2D3-216ENST00000503742 RHPN1-AS1Q9BWJ2 59 aa16.24■□□□□ 0.19
UBE2D3-216ENST00000503742 AGPAT4-IT1Q9H0P7 198 aa16.24■□□□□ 0.19
UBE2D3-216ENST00000503742 C9orf47Q6ZRZ4 202 aa16.23■□□□□ 0.19
UBE2D3-216ENST00000503742 SSBP4Q9BWG4 385 aaPredicted RBP16.23■□□□□ 0.19
UBE2D3-216ENST00000503742 SMPXQ9UHP9 88 aa16.23■□□□□ 0.19
UBE2D3-216ENST00000503742 SERF1AO75920 110 aa16.22■□□□□ 0.19
UBE2D3-216ENST00000503742 BMI1P35226 326 aa16.22■□□□□ 0.19
UBE2D3-216ENST00000503742 Q6AWC8 147 aa16.22■□□□□ 0.19
UBE2D3-216ENST00000503742 BAGE3Q86Y29 109 aa16.22■□□□□ 0.19
UBE2D3-216ENST00000503742 TMEM86BQ8N661 226 aa16.22■□□□□ 0.19
UBE2D3-216ENST00000503742 C20orf173Q96LM9 149 aa16.22■□□□□ 0.19
UBE2D3-216ENST00000503742 PPP1R14DQ9NXH3 145 aa16.22■□□□□ 0.19
UBE2D3-216ENST00000503742 TMEM189A5PLL7 270 aa16.22■□□□□ 0.19
UBE2D3-216ENST00000503742 KRTAP1-1Q07627 177 aa16.22■□□□□ 0.19
UBE2D3-216ENST00000503742 DUX5Q96PT3 197 aa16.22■□□□□ 0.19
UBE2D3-216ENST00000503742 AKAP9Q99996 3911 aa16.21■□□□□ 0.19
UBE2D3-216ENST00000503742 A0A1B0GUT8 65 aa16.21■□□□□ 0.19
UBE2D3-216ENST00000503742 SRSF2Q01130 221 aaKnown RBP16.21■□□□□ 0.19
UBE2D3-216ENST00000503742 LGALS1P09382 135 aaKnown RBP16.2■□□□□ 0.18
UBE2D3-216ENST00000503742 ZNF138P52744 262 aa16.2■□□□□ 0.18
UBE2D3-216ENST00000503742 PAFAH1B2P68402 229 aa16.2■□□□□ 0.18
UBE2D3-216ENST00000503742 UBE2E2Q96LR5 201 aa16.2■□□□□ 0.18
UBE2D3-216ENST00000503742 NRN1Q9NPD7 142 aa16.2■□□□□ 0.18
UBE2D3-216ENST00000503742 ARMS2P0C7Q2 107 aa16.2■□□□□ 0.18
UBE2D3-216ENST00000503742 ZNF575Q86XF7 245 aa16.2■□□□□ 0.18
UBE2D3-216ENST00000503742 CCDC168Q8NDH2 2452 aa16.19■□□□□ 0.18
UBE2D3-216ENST00000503742 EDN2P20800 178 aa16.19■□□□□ 0.18
UBE2D3-216ENST00000503742 TMEM78Q5T7P6 136 aa16.19■□□□□ 0.18
UBE2D3-216ENST00000503742 GATD1Q8NB37 220 aa16.19■□□□□ 0.18
UBE2D3-216ENST00000503742 ALKBH7Q9BT30 221 aaPredicted RBP16.19■□□□□ 0.18
UBE2D3-216ENST00000503742 UFC1Q9Y3C8 167 aa16.19■□□□□ 0.18
UBE2D3-216ENST00000503742 A0A1B0GV90 55 aa16.18■□□□□ 0.18
UBE2D3-216ENST00000503742 FABP5P3A8MUU1 101 aa16.18■□□□□ 0.18
UBE2D3-216ENST00000503742 RIGQ13278 110 aa16.18■□□□□ 0.18
UBE2D3-216ENST00000503742 C18orf32Q8TCD1 76 aa16.18■□□□□ 0.18
UBE2D3-216ENST00000503742 RPS20P60866 119 aaKnown RBP16.18■□□□□ 0.18
UBE2D3-216ENST00000503742 KLF5Q13887 457 aaPredicted RBP16.18■□□□□ 0.18
UBE2D3-216ENST00000503742 TLN2Q9Y4G6 2542 aa16.17■□□□□ 0.18
UBE2D3-216ENST00000503742 TMSB15BA0A087X1C1 80 aa16.17■□□□□ 0.18
UBE2D3-216ENST00000503742 A0A1B0GW15 77 aa16.17■□□□□ 0.18
UBE2D3-216ENST00000503742 ZNF738Q8NE65 137 aa16.17■□□□□ 0.18
UBE2D3-216ENST00000503742 RCHY1Q96PM5 261 aa16.17■□□□□ 0.18
UBE2D3-216ENST00000503742 NAGKQ9UJ70 344 aa16.17■□□□□ 0.18
UBE2D3-216ENST00000503742 FLNAP21333 2647 aaKnown RBP16.17■□□□□ 0.18
UBE2D3-216ENST00000503742 KIR2DL5BA0A0G2JN68 375 aa16.17■□□□□ 0.18
UBE2D3-216ENST00000503742 KIR2DL5BA0A0G2JPC4 375 aa16.17■□□□□ 0.18
UBE2D3-216ENST00000503742 TMEM213A2RRL7 107 aa16.17■□□□□ 0.18
UBE2D3-216ENST00000503742 CD5LO43866 347 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms