RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 PDE6HQ13956 83 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 PSG3Q16557 428 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 OCIAD2Q56VL3 154 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 C10orf55Q5SWW7 151 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 NEGR1Q7Z3B1 354 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 CNFNQ9BYD5 112 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 CTSZQ9UBR2 303 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 HIGD1AQ9Y241 93 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 CHD8Q9HCK8 2581 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 MUC21A0A0G2JKD1 596 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 MUC21A0A140T8X8 626 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 A0A1B0GUT8 65 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 NCR2O95944 276 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 IGKV1-17P01599 117 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 FCGR2BP31994 310 aaPredicted RBP3.04□□□□□ -1.92
CLTC-209ENST00000498711 RPL27AP46776 148 aaKnown RBP3.04□□□□□ -1.92
CLTC-209ENST00000498711 SEC61BP60468 96 aaKnown RBP3.04□□□□□ -1.92
CLTC-209ENST00000498711 PSG9Q00887 426 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 CACNA1BQ00975 2339 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 MUC21Q5SSG8 566 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 FAM104BQ5XKR9 115 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 LY6G5BQ8NDX9 201 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 NPBQ8NG41 125 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 OR9G4Q8NGQ1 327 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 OR10AG1Q8NH19 301 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 FAM57AQ8TBR7 257 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 ZC2HC1AQ96GY0 325 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 TMEM133Q9H2Q1 129 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 HIGD1BQ9P298 99 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 PEF1Q9UBV8 284 aaKnown RBP3.04□□□□□ -1.92
CLTC-209ENST00000498711 PTPRQQ9UMZ3 2332 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 VPS13CQ709C8 3753 aa3.04□□□□□ -1.92
CLTC-209ENST00000498711 TRAV8-6A0A0B4J262 113 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 TMEM189A5PLL7 270 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 OR2T8A6NH00 312 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 K7EIM0 57 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 NDUFA3O95167 84 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 IGLC6P0CF74 106 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 PSG1P11464 419 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 ARF6P62330 175 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 KRTAP21-3Q3LHN1 58 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 TMEM97Q5BJF2 176 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 LYPD2Q6UXB3 125 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 Q71RC1 249 aaPredicted RBP3.03□□□□□ -1.92
CLTC-209ENST00000498711 CIARTQ8N365 385 aaPredicted RBP3.03□□□□□ -1.92
CLTC-209ENST00000498711 OR1B1Q8NGR6 318 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 C17orf77Q96MU5 243 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 PSG8Q9UQ74 426 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 IGF2RP11717 2491 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 G3V4G9 280 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 CD24P25063 80 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 FBXL19-AS1Q494R0 122 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 AMMECR1LQ6DCA0 310 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 ZNF491Q8N8L2 437 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 OR4C5Q8NGB2 326 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 OR4X2Q8NGF9 303 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 CSTL1Q9H114 145 aa3.03□□□□□ -1.92
CLTC-209ENST00000498711 IGHV1-3A0A0C4DH29 117 aa3.03□□□□□ -1.93
CLTC-209ENST00000498711 HSBP1L1C9JCN9 74 aa3.03□□□□□ -1.93
CLTC-209ENST00000498711 LINC01619G3V211 115 aa3.03□□□□□ -1.93
CLTC-209ENST00000498711 BUB1B-PAK6H3BSN5 160 aa3.03□□□□□ -1.93
CLTC-209ENST00000498711 K7EP34 96 aa3.03□□□□□ -1.93
CLTC-209ENST00000498711 CHEK1O14757 476 aa3.03□□□□□ -1.93
CLTC-209ENST00000498711 NDUFB3O43676 98 aa3.03□□□□□ -1.93
CLTC-209ENST00000498711 ARMS2P0C7Q2 107 aa3.03□□□□□ -1.93
CLTC-209ENST00000498711 ORM2P19652 201 aa3.03□□□□□ -1.93
CLTC-209ENST00000498711 HSD52Q0P140 79 aa3.03□□□□□ -1.93
CLTC-209ENST00000498711 COTL1Q14019 142 aa3.03□□□□□ -1.93
CLTC-209ENST00000498711 DEFB108BQ8NET1 73 aa3.03□□□□□ -1.93
CLTC-209ENST00000498711 PHLDA1Q8WV24 401 aaPredicted RBP3.03□□□□□ -1.93
CLTC-209ENST00000498711 RNF185Q96GF1 192 aa3.03□□□□□ -1.93
CLTC-209ENST00000498711 SIGLEC8Q9NYZ4 499 aa3.03□□□□□ -1.93
CLTC-209ENST00000498711 CSMD1Q96PZ7 3565 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 LRBAP50851 2863 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 DNAJC13O75165 2243 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 APC2O95996 2303 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 IGLV2-18A0A075B6J9 118 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 C7orf71A4D174 169 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 IGHG4P01861 327 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 PRB1P04280 392 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 SMIM17P0DL12 118 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 EVI2AP22794 236 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 CSN1S1P47710 185 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 Q6ZSV7 163 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 Q75L30 129 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 PPP1R27Q86WC6 154 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 BLNKQ8WV28 456 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 TP73-AS1Q9UF72 201 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 INSIG2Q9Y5U4 225 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 SVILO95425 2214 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 ASH1LQ9NR48 2969 aaKnown RBP3.02□□□□□ -1.93
CLTC-209ENST00000498711 ITPR1Q14643 2758 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 RP1L1Q8IWN7 2480 aaPredicted RBP3.02□□□□□ -1.93
CLTC-209ENST00000498711 IGHV4-4A0A075B6R2 117 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 A0A087X0K7 114 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 FAM106CPP0CH98 169 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 CNTFRP26992 372 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 LOXL1Q08397 574 aaPredicted RBP3.02□□□□□ -1.93
CLTC-209ENST00000498711 EBI3Q14213 229 aa3.02□□□□□ -1.93
CLTC-209ENST00000498711 VAMP3Q15836 100 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms