RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 PDE6HQ13956 83 aa11.33□□□□□ -0.6
NR1H3-227ENST00000498548 ZNF493Q6ZR52 646 aa11.33□□□□□ -0.6
NR1H3-227ENST00000498548 SCGB1C1Q8TD33 95 aa11.33□□□□□ -0.6
NR1H3-227ENST00000498548 RNF141Q8WVD5 230 aa11.33□□□□□ -0.6
NR1H3-227ENST00000498548 FXYD5Q96DB9 178 aa11.33□□□□□ -0.6
NR1H3-227ENST00000498548 ODF3Q96PU9 254 aa11.33□□□□□ -0.6
NR1H3-227ENST00000498548 VGLL1Q99990 258 aa11.33□□□□□ -0.6
NR1H3-227ENST00000498548 AAMDCQ9H7C9 122 aa11.33□□□□□ -0.6
NR1H3-227ENST00000498548 NUDT3O95989 172 aa11.32□□□□□ -0.6
NR1H3-227ENST00000498548 IFNA5P01569 189 aa11.32□□□□□ -0.6
NR1H3-227ENST00000498548 ATP5G1P05496 136 aa11.32□□□□□ -0.6
NR1H3-227ENST00000498548 PET100P0DJ07 73 aa11.32□□□□□ -0.6
NR1H3-227ENST00000498548 RNASE4P34096 147 aaKnown RBP11.32□□□□□ -0.6
NR1H3-227ENST00000498548 ATP5G3P48201 142 aa11.32□□□□□ -0.6
NR1H3-227ENST00000498548 ZNF503Q96F45 646 aa11.32□□□□□ -0.6
NR1H3-227ENST00000498548 PHYHIPLQ96FC7 376 aa11.32□□□□□ -0.6
NR1H3-227ENST00000498548 ST6GAL2Q96JF0 529 aa11.32□□□□□ -0.6
NR1H3-227ENST00000498548 LINC00477Q96M19 166 aa11.32□□□□□ -0.6
NR1H3-227ENST00000498548 MRPL32Q9BYC8 188 aaKnown RBP11.32□□□□□ -0.6
NR1H3-227ENST00000498548 KCNIP2Q9NS61 270 aa11.32□□□□□ -0.6
NR1H3-227ENST00000498548 DNAH17Q9UFH2 4485 aa11.31□□□□□ -0.6
NR1H3-227ENST00000498548 GAGE12BA1L429 117 aa11.31□□□□□ -0.6
NR1H3-227ENST00000498548 C7orf71A4D174 169 aa11.31□□□□□ -0.6
NR1H3-227ENST00000498548 OR7C2O60412 319 aa11.31□□□□□ -0.6
NR1H3-227ENST00000498548 GAGE7O76087 117 aa11.31□□□□□ -0.6
NR1H3-227ENST00000498548 SLC25A5P05141 298 aaKnown RBP11.31□□□□□ -0.6
NR1H3-227ENST00000498548 GAGE12FP0CL80 117 aa11.31□□□□□ -0.6
NR1H3-227ENST00000498548 GAGE12GP0CL81 117 aa11.31□□□□□ -0.6
NR1H3-227ENST00000498548 GAGE12IP0CL82 117 aa11.31□□□□□ -0.6
NR1H3-227ENST00000498548 Q6ZQT7 251 aa11.31□□□□□ -0.6
NR1H3-227ENST00000498548 FAM19A4Q96LR4 140 aa11.31□□□□□ -0.6
NR1H3-227ENST00000498548 SNURFLB1AK76 121 aa11.3□□□□□ -0.6
NR1H3-227ENST00000498548 RANP62826 216 aaKnown RBP11.3□□□□□ -0.6
NR1H3-227ENST00000498548 C9orf47Q6ZRZ4 202 aa11.3□□□□□ -0.6
NR1H3-227ENST00000498548 C15orf53Q8NAA6 179 aa11.3□□□□□ -0.6
NR1H3-227ENST00000498548 FAT2Q9NYQ8 4349 aa11.29□□□□□ -0.6
NR1H3-227ENST00000498548 KLLNB2CW77 178 aa11.29□□□□□ -0.6
NR1H3-227ENST00000498548 ZNF324O75467 553 aaPredicted RBP11.29□□□□□ -0.6
NR1H3-227ENST00000498548 OR5I1Q13606 314 aa11.29□□□□□ -0.6
NR1H3-227ENST00000498548 RNF212Q495C1 297 aa11.29□□□□□ -0.6
NR1H3-227ENST00000498548 PRR9Q5T870 116 aa11.29□□□□□ -0.6
NR1H3-227ENST00000498548 PYGO2Q9BRQ0 406 aa11.29□□□□□ -0.6
NR1H3-227ENST00000498548 RTL8CO15255 209 aa11.28□□□□□ -0.6
NR1H3-227ENST00000498548 GPX1P07203 203 aa11.28□□□□□ -0.6
NR1H3-227ENST00000498548 LGALS9BQ3B8N2 356 aa11.28□□□□□ -0.6
NR1H3-227ENST00000498548 TMEM78Q5T7P6 136 aa11.28□□□□□ -0.6
NR1H3-227ENST00000498548 ATG101Q9BSB4 218 aa11.28□□□□□ -0.6
NR1H3-227ENST00000498548 Q9H3A6 140 aa11.28□□□□□ -0.6
NR1H3-227ENST00000498548 GSN-AS1Q9NRJ2 163 aa11.28□□□□□ -0.6
NR1H3-227ENST00000498548 ZNF492Q9P255 531 aa11.28□□□□□ -0.6
NR1H3-227ENST00000498548 A0A0J9YY99 117 aa11.27□□□□□ -0.61
NR1H3-227ENST00000498548 CRISP2P16562 243 aa11.27□□□□□ -0.61
NR1H3-227ENST00000498548 HOXA5P20719 270 aa11.27□□□□□ -0.61
NR1H3-227ENST00000498548 UBE2L3P68036 154 aaKnown RBP11.27□□□□□ -0.61
NR1H3-227ENST00000498548 Q6ZTI0 123 aa11.27□□□□□ -0.61
NR1H3-227ENST00000498548 ZFAND2AQ8N6M9 145 aa11.27□□□□□ -0.61
NR1H3-227ENST00000498548 LINC00612Q8N6U2 182 aa11.27□□□□□ -0.61
NR1H3-227ENST00000498548 Q8TAT8 98 aa11.27□□□□□ -0.61
NR1H3-227ENST00000498548 MED28Q9H204 178 aa11.27□□□□□ -0.61
NR1H3-227ENST00000498548 TP53TG3Q9ULZ0 132 aa11.27□□□□□ -0.61
NR1H3-227ENST00000498548 HECTD4Q9Y4D8 3996 aa11.26□□□□□ -0.61
NR1H3-227ENST00000498548 HMGB3O15347 200 aaKnown RBP11.26□□□□□ -0.61
NR1H3-227ENST00000498548 RAB2AP61019 212 aa11.26□□□□□ -0.61
NR1H3-227ENST00000498548 KHDC3LQ587J8 217 aa11.26□□□□□ -0.61
NR1H3-227ENST00000498548 Q5BKY6 102 aa11.26□□□□□ -0.61
NR1H3-227ENST00000498548 TCTE3Q8IZS6 198 aa11.26□□□□□ -0.61
NR1H3-227ENST00000498548 EIF4E3Q8N5X7 224 aaKnown RBP11.26□□□□□ -0.61
NR1H3-227ENST00000498548 C11orf72Q8NBR9 251 aa11.26□□□□□ -0.61
NR1H3-227ENST00000498548 HYLS1Q96M11 299 aa11.26□□□□□ -0.61
NR1H3-227ENST00000498548 KLF12Q9Y4X4 402 aa11.26□□□□□ -0.61
NR1H3-227ENST00000498548 TRAV26-1A0A087WT03 109 aa11.25□□□□□ -0.61
NR1H3-227ENST00000498548 CSN1S1P47710 185 aa11.25□□□□□ -0.61
NR1H3-227ENST00000498548 ZNF138P52744 262 aa11.25□□□□□ -0.61
NR1H3-227ENST00000498548 TAS2R45P59539 299 aa11.25□□□□□ -0.61
NR1H3-227ENST00000498548 ACOT6Q3I5F7 207 aaPredicted RBP11.25□□□□□ -0.61
NR1H3-227ENST00000498548 Q6ZR54 194 aa11.25□□□□□ -0.61
NR1H3-227ENST00000498548 LINC00336Q6ZUF6 198 aa11.25□□□□□ -0.61
NR1H3-227ENST00000498548 RPH3ALQ9UNE2 315 aa11.25□□□□□ -0.61
NR1H3-227ENST00000498548 PGPA6NDG6 321 aa11.24□□□□□ -0.61
NR1H3-227ENST00000498548 PRSS29PA6NIE9 313 aa11.24□□□□□ -0.61
NR1H3-227ENST00000498548 RGS13O14921 159 aa11.24□□□□□ -0.61
NR1H3-227ENST00000498548 M6PRP20645 277 aa11.24□□□□□ -0.61
NR1H3-227ENST00000498548 DAZ2Q13117 558 aaKnown RBP11.24□□□□□ -0.61
NR1H3-227ENST00000498548 TMPRSS5Q9H3S3 457 aa11.24□□□□□ -0.61
NR1H3-227ENST00000498548 TRGV1A0A0A0MS02 117 aa11.23□□□□□ -0.61
NR1H3-227ENST00000498548 A0A1W2PPV4 95 aa11.23□□□□□ -0.61
NR1H3-227ENST00000498548 DIRC3C9JPN6 131 aa11.23□□□□□ -0.61
NR1H3-227ENST00000498548 ANXA2RQ3ZCQ2 193 aa11.23□□□□□ -0.61
NR1H3-227ENST00000498548 LYPD1Q8N2G4 141 aa11.23□□□□□ -0.61
NR1H3-227ENST00000498548 HSD17B11Q8NBQ5 300 aa11.23□□□□□ -0.61
NR1H3-227ENST00000498548 OR10G4Q8NGN3 311 aa11.23□□□□□ -0.61
NR1H3-227ENST00000498548 OR10G9Q8NGN4 311 aa11.23□□□□□ -0.61
NR1H3-227ENST00000498548 OR10G7Q8NGN6 311 aa11.23□□□□□ -0.61
NR1H3-227ENST00000498548 GNPNAT1Q96EK6 184 aaPredicted RBP11.23□□□□□ -0.61
NR1H3-227ENST00000498548 LINC00467Q9BRT7 94 aa11.23□□□□□ -0.61
NR1H3-227ENST00000498548 LINC00588Q9Y4M8 146 aa11.23□□□□□ -0.61
NR1H3-227ENST00000498548 IGHV1OR15-1A0A075B7D0 117 aa11.22□□□□□ -0.61
NR1H3-227ENST00000498548 A0A1B0GVY2 172 aa11.22□□□□□ -0.61
NR1H3-227ENST00000498548 NMBP08949 121 aa11.22□□□□□ -0.61
NR1H3-227ENST00000498548 MUC21Q5SSG8 566 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 329.1 ms