RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 DSCR8Q96T75 97 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 AMELYQ99218 206 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 SPANXDQ9BXN6 97 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 EIF5A2Q9GZV4 153 aaKnown RBP2.03□□□□□ -2.08
CALD1-224ENST00000498254 CKLFQ9UBR5 152 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 OR5V1Q9UGF6 321 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 FIS1Q9Y3D6 152 aa2.03□□□□□ -2.08
CALD1-224ENST00000498254 SBF2Q86WG5 1849 aa2.03□□□□□ -2.09
CALD1-224ENST00000498254 SPHKAPQ2M3C7 1700 aa2.03□□□□□ -2.09
CALD1-224ENST00000498254 ADGBQ8N7X0 1667 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 SETBP1Q9Y6X0 1596 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 CDK12Q9NYV4 1490 aaPredicted RBP2.02□□□□□ -2.09
CALD1-224ENST00000498254 ZNF638Q14966 1978 aaKnown RBP2.02□□□□□ -2.09
CALD1-224ENST00000498254 TCHHQ07283 1943 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 TRBV20OR9-2A0A075B6H5 130 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 TRAV12-2A0A075B6T6 113 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 TRAV9-1A0A075B6T8 112 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 TRAV1-1A0A0B4J248 108 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 IGHV1-58A0A0C4DH39 117 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 IGKV1-12A0A0C4DH73 117 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 LOC107986453A0A1B0GWG9 222 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 RBAKDNA6NC62 111 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 MCRIP1C9JLW8 97 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 F8W1H4 67 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 H3BRM9 83 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 APOC4-APOC2K7ER74 178 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 TMEM256-PLSCR3K7ERE1 68 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 M0R2P5 195 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 M0R378 163 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 COX7A2LO14548 114 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 GNGT2O14610 69 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 PITX3O75364 302 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 IGKV1D-12P01611 117 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 APOC2P02655 101 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 CRYGAP11844 174 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 SLC25A4P12235 298 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 LGALS3P17931 250 aaKnown RBP2.02□□□□□ -2.09
CALD1-224ENST00000498254 OPRM1P35372 400 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 DAPP51397 102 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 ZNF80P51504 273 aaPredicted RBP2.02□□□□□ -2.09
CALD1-224ENST00000498254 KRTAP13-3Q3SY46 172 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 PRR9Q5T870 116 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 OR10P1Q8NGE3 313 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 VSTM2AQ8TAG5 236 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 MRPL30Q8TCC3 161 aaKnown RBP2.02□□□□□ -2.09
CALD1-224ENST00000498254 C10orf105Q8TEF2 133 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 POP5Q969H6 163 aaKnown RBP2.02□□□□□ -2.09
CALD1-224ENST00000498254 RAB37Q96AX2 223 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 MUCL1Q96DR8 90 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 PRELID3AQ96N28 172 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 AQP10Q96PS8 301 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 B9D2Q9BPU9 175 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 ZNF286AQ9HBT8 521 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 BCL2L10Q9HD36 194 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 NDUFB11Q9NX14 153 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 LSM2Q9Y333 95 aaKnown RBP2.02□□□□□ -2.09
CALD1-224ENST00000498254 NLRC5Q86WI3 1866 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 SCN11AQ9UI33 1791 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 RIMBP3CA6NJZ7 1639 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 RIMBP3BA6NNM3 1639 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 RNF17Q9BXT8 1623 aaKnown RBP2.02□□□□□ -2.09
CALD1-224ENST00000498254 RIMBP3Q9UFD9 1639 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 PLXNC1O60486 1568 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 ABCA8O94911 1581 aa2.02□□□□□ -2.09
CALD1-224ENST00000498254 URB2Q14146 1524 aaKnown RBP2.01□□□□□ -2.09
CALD1-224ENST00000498254 ABCC2Q92887 1545 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 SYCP2Q9BX26 1530 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 ALPK3Q96L96 1907 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 ANKRD31Q8N7Z5 1873 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 PLIN4Q96Q06 1357 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 STRCQ7RTU9 1775 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 MUC21A0A140T8X8 626 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 A0A1W2PPM0 123 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 HMSDA8MTL9 139 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 H3BT86 120 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 UBE2L6O14933 153 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 SYNGR2O43760 224 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 CREBL2O60519 120 aaPredicted RBP2.01□□□□□ -2.09
CALD1-224ENST00000498254 CST7O76096 145 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 HLA-DRB4P13762 266 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 CBLN1P23435 193 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 LSM3P62310 102 aaKnown RBP2.01□□□□□ -2.09
CALD1-224ENST00000498254 SEC11AP67812 179 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 QRFPP83859 136 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 KRTAP25-1Q3LHN0 102 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 LCA10Q71F78 164 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 BPIFA4PQ86YQ2 179 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 OR2T35Q8NGX2 323 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 FAM213BQ8TBF2 198 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 H1FXQ92522 213 aaKnown RBP2.01□□□□□ -2.09
CALD1-224ENST00000498254 TOMM6Q96B49 74 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 CCL13Q99616 98 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 PMCHL2Q9BQD1 86 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 TXNL4BQ9NX01 149 aaKnown RBP2.01□□□□□ -2.09
CALD1-224ENST00000498254 HHLA3Q9XRX5 114 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 R4GN34 69 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 HLA-DRB4X5D2U9 266 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 TET3O43151 1660 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 THSD7AQ9UPZ6 1657 aa2.01□□□□□ -2.09
CALD1-224ENST00000498254 MYO18AQ92614 2054 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms