RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 MPC2O95563 127 aa5.96□□□□□ -1.46
HMGXB4-207ENST00000498212 SLC25A5P05141 298 aaKnown RBP5.96□□□□□ -1.46
HMGXB4-207ENST00000498212 ERCC8Q13216 396 aa5.96□□□□□ -1.46
HMGXB4-207ENST00000498212 MIR17HGQ75NE6 70 aa5.96□□□□□ -1.46
HMGXB4-207ENST00000498212 EXOC3-AS1Q8N2X6 119 aa5.96□□□□□ -1.46
HMGXB4-207ENST00000498212 FAM167A-AS1Q96KT0 104 aa5.96□□□□□ -1.46
HMGXB4-207ENST00000498212 LINC00477Q96M19 166 aa5.96□□□□□ -1.46
HMGXB4-207ENST00000498212 ATP5SQ99766 215 aa5.96□□□□□ -1.46
HMGXB4-207ENST00000498212 PYGO2Q9BRQ0 406 aa5.96□□□□□ -1.46
HMGXB4-207ENST00000498212 OR51M1Q9H341 326 aa5.96□□□□□ -1.46
HMGXB4-207ENST00000498212 BATF3Q9NR55 127 aa5.96□□□□□ -1.46
HMGXB4-207ENST00000498212 HSPB11Q9Y547 144 aa5.96□□□□□ -1.46
HMGXB4-207ENST00000498212 C7orf71A4D174 169 aa5.95□□□□□ -1.46
HMGXB4-207ENST00000498212 NUDT3O95989 172 aa5.95□□□□□ -1.46
HMGXB4-207ENST00000498212 OR10J4P0C629 311 aa5.95□□□□□ -1.46
HMGXB4-207ENST00000498212 NBEAP1P0C6P0 100 aa5.95□□□□□ -1.46
HMGXB4-207ENST00000498212 FAM3BP58499 235 aaPredicted RBP5.95□□□□□ -1.46
HMGXB4-207ENST00000498212 ICAM4Q14773 271 aa5.95□□□□□ -1.46
HMGXB4-207ENST00000498212 FAM122CQ6P4D5 195 aa5.95□□□□□ -1.46
HMGXB4-207ENST00000498212 ATG101Q9BSB4 218 aa5.95□□□□□ -1.46
HMGXB4-207ENST00000498212 PAXXQ9BUH6 204 aa5.95□□□□□ -1.46
HMGXB4-207ENST00000498212 AGPAT4-IT1Q9H0P7 198 aa5.95□□□□□ -1.46
HMGXB4-207ENST00000498212 FUT9Q9Y231 359 aa5.95□□□□□ -1.46
HMGXB4-207ENST00000498212 DNAH6Q9C0G6 4158 aa5.95□□□□□ -1.46
HMGXB4-207ENST00000498212 IGKV2-40A0A087WW87 121 aaPredicted RBP5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 GAGE12BA1L429 117 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 PRSS29PA6NIE9 313 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 KLLNB2CW77 178 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 RTL8CO15255 209 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 OR7C2O60412 319 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 GAGE7O76087 117 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 IFNA5P01569 189 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 IGKV2D-40P01614 121 aaPredicted RBP5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 GPX1P07203 203 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 GAGE12FP0CL80 117 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 GAGE12GP0CL81 117 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 GAGE12IP0CL82 117 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 RPL12P30050 165 aaKnown RBP5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 BTN1A1Q13410 526 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 FFAR4Q5NUL3 377 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 TMEM78Q5T7P6 136 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 Q6ZR54 194 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 C9orf47Q6ZRZ4 202 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 LINC00612Q8N6U2 182 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 SCGB1C1Q8TD33 95 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 RNF141Q8WVD5 230 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 FXYD5Q96DB9 178 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 FAM19A4Q96LR4 140 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 SMIM3Q9BZL3 60 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 MBD2Q9UBB5 411 aa5.94□□□□□ -1.46
HMGXB4-207ENST00000498212 ZNF324O75467 553 aaPredicted RBP5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 NMBP08949 121 aa5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 CRISP2P16562 243 aa5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 RNASE4P34096 147 aaKnown RBP5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 CCL18P55774 89 aa5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 UBE2L3P68036 154 aaKnown RBP5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 CD300CQ08708 224 aa5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 DAZ2Q13117 558 aaKnown RBP5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 OR5I1Q13606 314 aa5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 KHDC3LQ587J8 217 aa5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 SOHLH1Q5JUK2 328 aa5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 LYPD1Q8N2G4 141 aa5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 EIF4E3Q8N5X7 224 aaKnown RBP5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 ZNF680Q8NEM1 530 aa5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 ZNF503Q96F45 646 aa5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 PHYHIPLQ96FC7 376 aa5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 VGLL1Q99990 258 aa5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 LINC00467Q9BRT7 94 aa5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 ZNF492Q9P255 531 aa5.93□□□□□ -1.46
HMGXB4-207ENST00000498212 DNAH10Q8IVF4 4471 aa5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 TRAV26-1A0A087WT03 109 aa5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 A0A1B0GVY2 172 aa5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 RGS13O14921 159 aa5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 M6PRP20645 277 aa5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 HOXA5P20719 270 aa5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 CSN1S1P47710 185 aa5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 TAS2R45P59539 299 aa5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 RANP62826 216 aaKnown RBP5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 ANXA2RQ3ZCQ2 193 aa5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 Q6ZTI0 123 aa5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 ZFAND2AQ8N6M9 145 aa5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 C11orf72Q8NBR9 251 aa5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 ZNRF2Q8NHG8 242 aa5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 GNPNAT1Q96EK6 184 aaPredicted RBP5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 Q9H3A6 140 aa5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 GSN-AS1Q9NRJ2 163 aa5.92□□□□□ -1.46
HMGXB4-207ENST00000498212 TRGV2A0A075B6R0 118 aa5.91□□□□□ -1.46
HMGXB4-207ENST00000498212 TRBV7-9A0A0J9YWB2 115 aa5.91□□□□□ -1.46
HMGXB4-207ENST00000498212 A0A0J9YY99 117 aa5.91□□□□□ -1.46
HMGXB4-207ENST00000498212 RBAKDNA6NC62 111 aa5.91□□□□□ -1.46
HMGXB4-207ENST00000498212 ZNF138P52744 262 aa5.91□□□□□ -1.46
HMGXB4-207ENST00000498212 ACOT6Q3I5F7 207 aaPredicted RBP5.91□□□□□ -1.46
HMGXB4-207ENST00000498212 IBA57Q5T440 356 aaKnown RBP5.91□□□□□ -1.46
HMGXB4-207ENST00000498212 PRR9Q5T870 116 aa5.91□□□□□ -1.46
HMGXB4-207ENST00000498212 C1orf134Q5TEV5 83 aa5.91□□□□□ -1.46
HMGXB4-207ENST00000498212 Q8TAT8 98 aa5.91□□□□□ -1.46
HMGXB4-207ENST00000498212 RXFP4Q8TDU9 374 aa5.91□□□□□ -1.46
HMGXB4-207ENST00000498212 TMPRSS5Q9H3S3 457 aa5.91□□□□□ -1.46
HMGXB4-207ENST00000498212 WFDC1Q9HC57 220 aa5.91□□□□□ -1.46
HMGXB4-207ENST00000498212 LINC00588Q9Y4M8 146 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms