RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 ZNF138P52744 262 aa12.95□□□□□ -0.34
CTDSP1-215ENST00000498160 UBE2G1P62253 170 aa12.95□□□□□ -0.34
CTDSP1-215ENST00000498160 ZNF124Q15973 351 aa12.95□□□□□ -0.34
CTDSP1-215ENST00000498160 GDF5OSQ5U4N7 250 aa12.95□□□□□ -0.34
CTDSP1-215ENST00000498160 LINC00322Q6ZN03 302 aaPredicted RBP12.95□□□□□ -0.34
CTDSP1-215ENST00000498160 C11orf52Q96A22 123 aa12.95□□□□□ -0.34
CTDSP1-215ENST00000498160 FMC1Q96HJ9 113 aa12.95□□□□□ -0.34
CTDSP1-215ENST00000498160 EIF5A2Q9GZV4 153 aaKnown RBP12.95□□□□□ -0.34
CTDSP1-215ENST00000498160 CSTL1Q9H114 145 aa12.95□□□□□ -0.34
CTDSP1-215ENST00000498160 IGKV2-40A0A087WW87 121 aaPredicted RBP12.94□□□□□ -0.34
CTDSP1-215ENST00000498160 TRBV6-1A0A0K0K1D8 114 aa12.94□□□□□ -0.34
CTDSP1-215ENST00000498160 TMEM250H0YL14 139 aa12.94□□□□□ -0.34
CTDSP1-215ENST00000498160 IGKV2D-40P01614 121 aaPredicted RBP12.94□□□□□ -0.34
CTDSP1-215ENST00000498160 PEA15Q15121 130 aa12.94□□□□□ -0.34
CTDSP1-215ENST00000498160 DEFB121Q5J5C9 76 aa12.94□□□□□ -0.34
CTDSP1-215ENST00000498160 ZNF492Q9P255 531 aa12.94□□□□□ -0.34
CTDSP1-215ENST00000498160 DNAH3Q8TD57 4116 aa12.94□□□□□ -0.34
CTDSP1-215ENST00000498160 NOTCH1P46531 2555 aa12.94□□□□□ -0.34
CTDSP1-215ENST00000498160 NBEAL1Q6ZS30 2694 aa12.94□□□□□ -0.34
CTDSP1-215ENST00000498160 PRB2P02812 416 aaPredicted RBP12.93□□□□□ -0.34
CTDSP1-215ENST00000498160 FRMD6-AS1P0C7T7 363 aa12.93□□□□□ -0.34
CTDSP1-215ENST00000498160 GNG5P63218 68 aa12.93□□□□□ -0.34
CTDSP1-215ENST00000498160 DEFA6Q01524 100 aa12.93□□□□□ -0.34
CTDSP1-215ENST00000498160 FLI1Q01543 452 aaPredicted RBP12.93□□□□□ -0.34
CTDSP1-215ENST00000498160 TOR2AQ5JU69 321 aa12.93□□□□□ -0.34
CTDSP1-215ENST00000498160 SAPCD1Q5SSQ6 148 aa12.93□□□□□ -0.34
CTDSP1-215ENST00000498160 AGPAT4-IT1Q9H0P7 198 aa12.93□□□□□ -0.34
CTDSP1-215ENST00000498160 RAB19A4D1S5 217 aa12.92□□□□□ -0.34
CTDSP1-215ENST00000498160 RBMY1BA6NDE4 496 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-215ENST00000498160 RBMY1EA6NEQ0 496 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-215ENST00000498160 RBMY1DP0C7P1 496 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-215ENST00000498160 CRISP2P16562 243 aa12.92□□□□□ -0.34
CTDSP1-215ENST00000498160 RPL35AP18077 110 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-215ENST00000498160 CDKN1BP46527 198 aa12.92□□□□□ -0.34
CTDSP1-215ENST00000498160 TMEM183BQ1AE95 376 aa12.92□□□□□ -0.34
CTDSP1-215ENST00000498160 AMTNQ6UX39 209 aa12.92□□□□□ -0.34
CTDSP1-215ENST00000498160 C20orf144Q9BQM9 153 aa12.92□□□□□ -0.34
CTDSP1-215ENST00000498160 MED9Q9NWA0 146 aa12.92□□□□□ -0.34
CTDSP1-215ENST00000498160 ZFP30Q9Y2G7 519 aa12.92□□□□□ -0.34
CTDSP1-215ENST00000498160 KLF12Q9Y4X4 402 aa12.92□□□□□ -0.34
CTDSP1-215ENST00000498160 ZNF705DP0CH99 300 aaPredicted RBP12.91□□□□□ -0.34
CTDSP1-215ENST00000498160 ZNF705BP0CI00 300 aaPredicted RBP12.91□□□□□ -0.34
CTDSP1-215ENST00000498160 TAS2R60P59551 318 aa12.91□□□□□ -0.34
CTDSP1-215ENST00000498160 DEFB1P60022 68 aa12.91□□□□□ -0.34
CTDSP1-215ENST00000498160 Q6ZWC4 215 aa12.91□□□□□ -0.34
CTDSP1-215ENST00000498160 C2CD4CQ8TF44 421 aa12.91□□□□□ -0.34
CTDSP1-215ENST00000498160 PCNPQ8WW12 178 aaKnown RBP12.91□□□□□ -0.34
CTDSP1-215ENST00000498160 VGLL1Q99990 258 aa12.91□□□□□ -0.34
CTDSP1-215ENST00000498160 PSG8Q9UQ74 426 aa12.91□□□□□ -0.34
CTDSP1-215ENST00000498160 SCO2A0A1W2PP80 73 aa12.9□□□□□ -0.34
CTDSP1-215ENST00000498160 CA1P00915 261 aaPredicted RBP12.9□□□□□ -0.34
CTDSP1-215ENST00000498160 IGKV3-20P01619 116 aa12.9□□□□□ -0.34
CTDSP1-215ENST00000498160 CT45A10P0DMU9 189 aa12.9□□□□□ -0.34
CTDSP1-215ENST00000498160 ERCC8Q13216 396 aa12.9□□□□□ -0.34
CTDSP1-215ENST00000498160 SMIM12Q96EX1 92 aa12.9□□□□□ -0.34
CTDSP1-215ENST00000498160 FAM19A4Q96LR4 140 aa12.9□□□□□ -0.34
CTDSP1-215ENST00000498160 INSP01308 110 aa12.89□□□□□ -0.35
CTDSP1-215ENST00000498160 IGF2BP2-AS1Q96M15 143 aa12.89□□□□□ -0.35
CTDSP1-215ENST00000498160 RARRES2Q99969 163 aa12.89□□□□□ -0.35
CTDSP1-215ENST00000498160 TP53TG1Q9Y2A0 90 aa12.89□□□□□ -0.35
CTDSP1-215ENST00000498160 Q86TA4 180 aa12.88□□□□□ -0.35
CTDSP1-215ENST00000498160 TMEM256Q8N2U0 113 aa12.88□□□□□ -0.35
CTDSP1-215ENST00000498160 B9D2Q9BPU9 175 aa12.88□□□□□ -0.35
CTDSP1-215ENST00000498160 TREM1Q9NP99 234 aa12.88□□□□□ -0.35
CTDSP1-215ENST00000498160 KLLNB2CW77 178 aa12.87□□□□□ -0.35
CTDSP1-215ENST00000498160 IGLV2-11P01706 119 aa12.87□□□□□ -0.35
CTDSP1-215ENST00000498160 GPX1P07203 203 aa12.87□□□□□ -0.35
CTDSP1-215ENST00000498160 SPINK13Q1W4C9 94 aa12.87□□□□□ -0.35
CTDSP1-215ENST00000498160 UQCC3Q6UW78 93 aa12.87□□□□□ -0.35
CTDSP1-215ENST00000498160 PRNTQ86SH4 94 aa12.87□□□□□ -0.35
CTDSP1-215ENST00000498160 SPATA25Q9BR10 227 aa12.87□□□□□ -0.35
CTDSP1-215ENST00000498160 SLC35B3Q9H1N7 401 aa12.87□□□□□ -0.35
CTDSP1-215ENST00000498160 GOLT1BQ9Y3E0 138 aa12.87□□□□□ -0.35
CTDSP1-215ENST00000498160 AGRNO00468 2067 aa12.86□□□□□ -0.35
CTDSP1-215ENST00000498160 TRAV8-1A0A0A6YYK1 113 aa12.86□□□□□ -0.35
CTDSP1-215ENST00000498160 LTAP01374 205 aa12.86□□□□□ -0.35
CTDSP1-215ENST00000498160 RPL35P42766 123 aaKnown RBP12.86□□□□□ -0.35
CTDSP1-215ENST00000498160 FAM74A3Q4VXF1 159 aa12.86□□□□□ -0.35
CTDSP1-215ENST00000498160 SMUG1Q53HV7 270 aa12.86□□□□□ -0.35
CTDSP1-215ENST00000498160 COX8CQ7Z4L0 72 aa12.86□□□□□ -0.35
CTDSP1-215ENST00000498160 Q8TAT8 98 aa12.86□□□□□ -0.35
CTDSP1-215ENST00000498160 NIPSNAP3BQ9BS92 247 aa12.86□□□□□ -0.35
CTDSP1-215ENST00000498160 BIN3Q9NQY0 253 aa12.86□□□□□ -0.35
CTDSP1-215ENST00000498160 C7orf71A4D174 169 aa12.85□□□□□ -0.35
CTDSP1-215ENST00000498160 M0R2Z0 102 aa12.85□□□□□ -0.35
CTDSP1-215ENST00000498160 NHLRC4P0CG21 123 aaPredicted RBP12.85□□□□□ -0.35
CTDSP1-215ENST00000498160 TMEM183AQ8IXX5 376 aa12.85□□□□□ -0.35
CTDSP1-215ENST00000498160 RCHY1Q96PM5 261 aa12.85□□□□□ -0.35
CTDSP1-215ENST00000498160 ZMAT4Q9H898 229 aa12.85□□□□□ -0.35
CTDSP1-215ENST00000498160 XCL2Q9UBD3 114 aa12.85□□□□□ -0.35
CTDSP1-215ENST00000498160 TRAV34A0A0B4J273 112 aa12.84□□□□□ -0.35
CTDSP1-215ENST00000498160 LINC00862A6NCI5 91 aa12.84□□□□□ -0.35
CTDSP1-215ENST00000498160 C9JCJ5 164 aa12.84□□□□□ -0.35
CTDSP1-215ENST00000498160 SRP19P09132 144 aaKnown RBP12.84□□□□□ -0.35
CTDSP1-215ENST00000498160 GNG4P50150 75 aa12.84□□□□□ -0.35
CTDSP1-215ENST00000498160 BAGE2Q86Y30 109 aa12.84□□□□□ -0.35
CTDSP1-215ENST00000498160 ZFAND2AQ8N6M9 145 aa12.84□□□□□ -0.35
CTDSP1-215ENST00000498160 ASCL2Q99929 193 aa12.84□□□□□ -0.35
CTDSP1-215ENST00000498160 Q6AWC8 147 aa12.83□□□□□ -0.36
CTDSP1-215ENST00000498160 EIF4E3Q8N5X7 224 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms