RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 C18orf65Q6ZTR6 163 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 TCF24Q7RTU0 167 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 NUDT10Q8NFP7 164 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 NUDT11Q96G61 164 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 C8orf49Q96NF6 230 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 SMPXQ9UHP9 88 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 SMIM27A0A1W2PRY6 76 aa6.13□□□□□ -1.43
PDZRN3-212ENST00000498048 C19orf71A6NCJ1 209 aa6.13□□□□□ -1.43
PDZRN3-212ENST00000498048 INAFM1C9JVW0 142 aa6.13□□□□□ -1.43
PDZRN3-212ENST00000498048 SOCS3O14543 225 aa6.13□□□□□ -1.43
PDZRN3-212ENST00000498048 TRGC2P03986 189 aa6.13□□□□□ -1.43
PDZRN3-212ENST00000498048 CDX1P47902 265 aaPredicted RBP6.13□□□□□ -1.43
PDZRN3-212ENST00000498048 ACTL10Q5JWF8 245 aa6.13□□□□□ -1.43
PDZRN3-212ENST00000498048 TMEM78Q5T7P6 136 aa6.13□□□□□ -1.43
PDZRN3-212ENST00000498048 DPF1Q92782 380 aa6.13□□□□□ -1.43
PDZRN3-212ENST00000498048 VGLL1Q99990 258 aa6.13□□□□□ -1.43
PDZRN3-212ENST00000498048 SELENOKQ9Y6D0 94 aa6.13□□□□□ -1.43
PDZRN3-212ENST00000498048 NSD1Q96L73 2696 aaPredicted RBP6.13□□□□□ -1.43
PDZRN3-212ENST00000498048 A0A1W2PRX2 142 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 IZUMO1RA6ND01 250 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 C2orf70A6NJV1 201 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 A8MWL6 223 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 SNURFLB1AK76 121 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 PRAC2D3DTV9 90 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 NPIPB6E9PJ23 425 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 SH2D1AO60880 128 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 NDUFA7O95182 113 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 ERCC8Q13216 396 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 SMUG1Q53HV7 270 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 TCTEX1D4Q5JR98 221 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 SAPCD1Q5SSQ6 148 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 MRPL54Q6P161 138 aaKnown RBP6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 WDR73Q6P4I2 378 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 LINC00322Q6ZN03 302 aaPredicted RBP6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 OR2D3Q8NGH3 330 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 WIPF2Q8TF74 440 aaPredicted RBP6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 TSKUQ8WUA8 353 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 FRZBQ92765 325 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 C20orf173Q96LM9 149 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 PRR25Q96S07 402 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 NEU1Q99519 415 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 GPR61Q9BZJ8 451 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 SAV1Q9H4B6 383 aaPredicted RBP6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 C16orf95Q9H693 158 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 PEMTQ9UBM1 199 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 NAT8BQ9UHF3 227 aa6.12□□□□□ -1.43
PDZRN3-212ENST00000498048 HIGD1CA8MV81 97 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 OVOL1O14753 267 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 TCF21O43680 179 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 SPINK4O60575 86 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 HIST1H2BKO60814 126 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 MT-ND6P03923 174 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 HIST1H2BJP06899 126 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 CD28P10747 220 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 FOSL1P15407 271 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 CBLN1P23435 193 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 HIST1H2BOP23527 126 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 HIST1H2BBP33778 126 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 ID1P41134 155 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 ZNF138P52744 262 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 HIST1H2BDP58876 126 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 HIST1H2BCP62807 126 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 HIST2H2BEQ16778 126 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 COX19Q49B96 90 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 FAM162BQ5T6X4 162 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 SHISA2Q6UWI4 295 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 C11orf44Q8N8P7 122 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 OR11H1Q8NG94 326 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 OR1N2Q8NGR9 330 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 OR10J6PQ8NGY7 276 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 LINC01006Q8NI28 216 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 DYNLRB2Q8TF09 96 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 HIST1H2BHQ93079 126 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 DUX3Q96PT4 197 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 HIST1H2BNQ99877 126 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 HIST1H2BMQ99879 126 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 TRAPPC1Q9Y5R8 145 aa6.11□□□□□ -1.43
PDZRN3-212ENST00000498048 OTOGQ6ZRI0 2925 aa6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 HLA-DQA1P01909 254 aa6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 TRGC1P0CF51 173 aa6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 TFPI2P48307 235 aa6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 RAB4BP61018 213 aa6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 HIST1H1AQ02539 215 aaPredicted RBP6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 FABP9Q0Z7S8 132 aa6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 HIST2H2BDQ6DRA6 164 aa6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 C9orf47Q6ZRZ4 202 aa6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 COX8CQ7Z4L0 72 aa6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 ATP5L2Q7Z4Y8 100 aa6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 NUP35Q8NFH5 326 aa6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 OR9G4Q8NGQ1 327 aa6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 DCANP1Q8TF63 244 aa6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 WFDC12Q8WWY7 111 aa6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 GFRA4Q9GZZ7 299 aa6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 MRPL18Q9H0U6 180 aaKnown RBP6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 MS4A6AQ9H2W1 248 aa6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 TSSC4Q9Y5U2 329 aaPredicted RBP6.1□□□□□ -1.43
PDZRN3-212ENST00000498048 XKRY2A2RUG3 117 aa6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 TMEM189A5PLL7 270 aa6.09□□□□□ -1.43
PDZRN3-212ENST00000498048 PHOX2AO14813 284 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms