RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 CT45A10P0DMU9 189 aa13.46□□□□□ -0.25
CHRNA4-206ENST00000498043 FOSL1P15407 271 aa13.46□□□□□ -0.25
CHRNA4-206ENST00000498043 BTF3L4Q96K17 158 aa13.46□□□□□ -0.25
CHRNA4-206ENST00000498043 TRAV9-1A0A075B6T8 112 aa13.46□□□□□ -0.26
CHRNA4-206ENST00000498043 RBAKDNA6NC62 111 aa13.46□□□□□ -0.26
CHRNA4-206ENST00000498043 FBLL1A6NHQ2 334 aaKnown RBP13.46□□□□□ -0.26
CHRNA4-206ENST00000498043 CBLN1P23435 193 aa13.46□□□□□ -0.26
CHRNA4-206ENST00000498043 CLEC5AQ9NY25 188 aa13.46□□□□□ -0.26
CHRNA4-206ENST00000498043 FLNBO75369 2602 aaKnown RBP13.45□□□□□ -0.26
CHRNA4-206ENST00000498043 ZNF705DP0CH99 300 aaPredicted RBP13.45□□□□□ -0.26
CHRNA4-206ENST00000498043 ZNF705BP0CI00 300 aaPredicted RBP13.45□□□□□ -0.26
CHRNA4-206ENST00000498043 CRIP1P50238 77 aa13.45□□□□□ -0.26
CHRNA4-206ENST00000498043 SAPCD1Q5SSQ6 148 aa13.45□□□□□ -0.26
CHRNA4-206ENST00000498043 DEFB1P60022 68 aa13.44□□□□□ -0.26
CHRNA4-206ENST00000498043 WFDC3Q8IUB2 231 aa13.44□□□□□ -0.26
CHRNA4-206ENST00000498043 TSKUQ8WUA8 353 aa13.44□□□□□ -0.26
CHRNA4-206ENST00000498043 NEU1Q99519 415 aa13.44□□□□□ -0.26
CHRNA4-206ENST00000498043 CITED2Q99967 270 aaPredicted RBP13.44□□□□□ -0.26
CHRNA4-206ENST00000498043 NDFIP1Q9BT67 221 aa13.44□□□□□ -0.26
CHRNA4-206ENST00000498043 NPIPB6E9PJ23 425 aa13.44□□□□□ -0.26
CHRNA4-206ENST00000498043 FRMD6-AS1P0C7T7 363 aa13.44□□□□□ -0.26
CHRNA4-206ENST00000498043 TFPI2P48307 235 aa13.44□□□□□ -0.26
CHRNA4-206ENST00000498043 RPL19P84098 196 aaKnown RBP13.44□□□□□ -0.26
CHRNA4-206ENST00000498043 TMEM78Q5T7P6 136 aa13.44□□□□□ -0.26
CHRNA4-206ENST00000498043 FRZBQ92765 325 aa13.44□□□□□ -0.26
CHRNA4-206ENST00000498043 AGPAT4-IT1Q9H0P7 198 aa13.44□□□□□ -0.26
CHRNA4-206ENST00000498043 NDUFA7O95182 113 aa13.43□□□□□ -0.26
CHRNA4-206ENST00000498043 MRPL54Q6P161 138 aaKnown RBP13.43□□□□□ -0.26
CHRNA4-206ENST00000498043 OR2D3Q8NGH3 330 aa13.43□□□□□ -0.26
CHRNA4-206ENST00000498043 RNF114Q9Y508 228 aa13.43□□□□□ -0.26
CHRNA4-206ENST00000498043 HIGD1CA8MV81 97 aa13.43□□□□□ -0.26
CHRNA4-206ENST00000498043 PHOX2AO14813 284 aa13.43□□□□□ -0.26
CHRNA4-206ENST00000498043 TCF21O43680 179 aa13.43□□□□□ -0.26
CHRNA4-206ENST00000498043 CT83Q5H943 113 aa13.43□□□□□ -0.26
CHRNA4-206ENST00000498043 ADAMTSL5Q6ZMM2 481 aa13.43□□□□□ -0.26
CHRNA4-206ENST00000498043 DCANP1Q8TF63 244 aa13.43□□□□□ -0.26
CHRNA4-206ENST00000498043 DLX4Q92988 240 aaPredicted RBP13.43□□□□□ -0.26
CHRNA4-206ENST00000498043 RAX2Q96IS3 184 aa13.43□□□□□ -0.26
CHRNA4-206ENST00000498043 MS4A6AQ9H2W1 248 aa13.43□□□□□ -0.26
CHRNA4-206ENST00000498043 SETXQ7Z333 2677 aaKnown RBP13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 SETD2Q9BYW2 2564 aaPredicted RBP13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 M0QZ24 198 aa13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 HIST1H2BKO60814 126 aa13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 SH2D1AO60880 128 aa13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 HIST1H2BJP06899 126 aa13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 GZMBP10144 247 aa13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 HIST1H2BOP23527 126 aa13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 HIST1H2BBP33778 126 aa13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 HIST1H2BDP58876 126 aa13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 HIST1H2BCP62807 126 aa13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 HIST2H2BEQ16778 126 aa13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 ACTL10Q5JWF8 245 aa13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 NUP35Q8NFH5 326 aa13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 HIST1H2BHQ93079 126 aa13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 HIST1H2BNQ99877 126 aa13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 HIST1H2BMQ99879 126 aa13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 NAT8BQ9UHF3 227 aa13.42□□□□□ -0.26
CHRNA4-206ENST00000498043 IZUMO1RA6ND01 250 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 A8MWL6 223 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 S100A6P06703 90 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 TRGC1P0CF51 173 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 ZNF80P51504 273 aaPredicted RBP13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 ZNF138P52744 262 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 FABP9Q0Z7S8 132 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 FAM162BQ5T6X4 162 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 OR4B1Q8NGF8 309 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 OR9G4Q8NGQ1 327 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 GTSF1Q8WW33 167 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 FN1P02751 2386 aaKnown RBP13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 F6UB75 175 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 SMUG1Q53HV7 270 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 C9orf47Q6ZRZ4 202 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 COX8CQ7Z4L0 72 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 WFDC12Q8WWY7 111 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 PEMTQ9UBM1 199 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 TRAPPC1Q9Y5R8 145 aa13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 TSSC4Q9Y5U2 329 aaPredicted RBP13.41□□□□□ -0.26
CHRNA4-206ENST00000498043 OR10J6PQ8NGY7 276 aa13.4□□□□□ -0.26
CHRNA4-206ENST00000498043 SAV1Q9H4B6 383 aaPredicted RBP13.4□□□□□ -0.26
CHRNA4-206ENST00000498043 ID1P41134 155 aa13.4□□□□□ -0.27
CHRNA4-206ENST00000498043 HIST1H1AQ02539 215 aaPredicted RBP13.4□□□□□ -0.27
CHRNA4-206ENST00000498043 OVOL1O14753 267 aa13.39□□□□□ -0.27
CHRNA4-206ENST00000498043 ZNF688P0C7X2 276 aa13.39□□□□□ -0.27
CHRNA4-206ENST00000498043 PROK1P58294 105 aa13.39□□□□□ -0.27
CHRNA4-206ENST00000498043 SNRPEP62304 92 aaKnown RBP13.39□□□□□ -0.27
CHRNA4-206ENST00000498043 TMSB15BA0A087X1C1 80 aa13.38□□□□□ -0.27
CHRNA4-206ENST00000498043 SNURFLB1AK76 121 aa13.38□□□□□ -0.27
CHRNA4-206ENST00000498043 CRLF1O75462 422 aa13.38□□□□□ -0.27
CHRNA4-206ENST00000498043 FHL3Q13643 280 aa13.38□□□□□ -0.27
CHRNA4-206ENST00000498043 SAMD13Q5VXD3 122 aa13.38□□□□□ -0.27
CHRNA4-206ENST00000498043 PGLYRP4Q96LB8 373 aa13.38□□□□□ -0.27
CHRNA4-206ENST00000498043 CCL24O00175 119 aa13.38□□□□□ -0.27
CHRNA4-206ENST00000498043 OR8A1Q8NGG7 326 aa13.38□□□□□ -0.27
CHRNA4-206ENST00000498043 GFRA4Q9GZZ7 299 aa13.38□□□□□ -0.27
CHRNA4-206ENST00000498043 K7EQG2 157 aa13.37□□□□□ -0.27
CHRNA4-206ENST00000498043 RAB4BP61018 213 aa13.37□□□□□ -0.27
CHRNA4-206ENST00000498043 PSMG4Q5JS54 123 aa13.37□□□□□ -0.27
CHRNA4-206ENST00000498043 NDUFA6P56556 154 aa13.36□□□□□ -0.27
CHRNA4-206ENST00000498043 RBPMS2Q6ZRY4 209 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms