RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 IGHV1-18A0A0C4DH31 117 aa8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 XGP55808 180 aa8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 HERV-K104P63124 156 aa8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 RRN3P1Q2M238 152 aa8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 ARHGAP32A7KAX9 2087 aa8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 SIVA1O15304 175 aa8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 HLA-DMBP28068 263 aa8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 FOXI1Q12951 378 aa8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 TTC32Q5I0X7 151 aa8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 Q6ZT83 130 aa8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 C1orf210Q8IVY1 113 aa8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 ZNF576Q9H609 170 aa8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 C2CD3Q4AC94 2353 aa8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 E9PLD3 99 aa8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 ZFAND6Q6FIF0 208 aa8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 ZFP2Q6ZN57 461 aa8.41□□□□□ -1.06
TRAPPC12-223ENST00000497597 TNFRSF6BO95407 300 aa8.4□□□□□ -1.06
TRAPPC12-223ENST00000497597 CRIP1P50238 77 aa8.4□□□□□ -1.06
TRAPPC12-223ENST00000497597 ODF1Q14990 250 aa8.4□□□□□ -1.06
TRAPPC12-223ENST00000497597 ZNF562Q6V9R5 426 aa8.4□□□□□ -1.06
TRAPPC12-223ENST00000497597 C9orf106Q8NAJ2 232 aa8.4□□□□□ -1.06
TRAPPC12-223ENST00000497597 PROCRQ9UNN8 238 aa8.4□□□□□ -1.06
TRAPPC12-223ENST00000497597 CFAP161Q6P656 301 aa8.4□□□□□ -1.07
TRAPPC12-223ENST00000497597 SIT1Q9Y3P8 196 aa8.4□□□□□ -1.07
TRAPPC12-223ENST00000497597 ZNF815PA8K554 130 aa8.39□□□□□ -1.07
TRAPPC12-223ENST00000497597 DLX4Q92988 240 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC12-223ENST00000497597 RAXQ9Y2V3 346 aa8.39□□□□□ -1.07
TRAPPC12-223ENST00000497597 MYCNOSP40205 109 aa8.39□□□□□ -1.07
TRAPPC12-223ENST00000497597 ZNF785A8K8V0 405 aa8.39□□□□□ -1.07
TRAPPC12-223ENST00000497597 Q6ZUT4 128 aa8.39□□□□□ -1.07
TRAPPC12-223ENST00000497597 SPATA25Q9BR10 227 aa8.39□□□□□ -1.07
TRAPPC12-223ENST00000497597 EGR2P11161 476 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC12-223ENST00000497597 ATP5IP56385 69 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC12-223ENST00000497597 SPANXN1Q5VSR9 72 aa8.38□□□□□ -1.07
TRAPPC12-223ENST00000497597 TMEM167AQ8TBQ9 72 aa8.38□□□□□ -1.07
TRAPPC12-223ENST00000497597 RAX2Q96IS3 184 aa8.38□□□□□ -1.07
TRAPPC12-223ENST00000497597 C1QTNF4Q9BXJ3 329 aa8.38□□□□□ -1.07
TRAPPC12-223ENST00000497597 SNCGO76070 127 aa8.38□□□□□ -1.07
TRAPPC12-223ENST00000497597 MGPP08493 103 aa8.38□□□□□ -1.07
TRAPPC12-223ENST00000497597 ERCC8Q13216 396 aa8.38□□□□□ -1.07
TRAPPC12-223ENST00000497597 POU2AF1Q16633 256 aa8.38□□□□□ -1.07
TRAPPC12-223ENST00000497597 TCTEX1D4Q5JR98 221 aa8.38□□□□□ -1.07
TRAPPC12-223ENST00000497597 GAFA1Q96PS6 74 aa8.38□□□□□ -1.07
TRAPPC12-223ENST00000497597 C10orf142B7Z368 130 aa8.37□□□□□ -1.07
TRAPPC12-223ENST00000497597 NDUFB3O43676 98 aa8.37□□□□□ -1.07
TRAPPC12-223ENST00000497597 GAGE2BQ13066 116 aa8.37□□□□□ -1.07
TRAPPC12-223ENST00000497597 FHL3Q13643 280 aa8.37□□□□□ -1.07
TRAPPC12-223ENST00000497597 GAGE2EQ4V326 116 aa8.37□□□□□ -1.07
TRAPPC12-223ENST00000497597 KLHL30-AS1Q8NEE0 82 aa8.37□□□□□ -1.07
TRAPPC12-223ENST00000497597 TRGV9Q99603 122 aa8.37□□□□□ -1.07
TRAPPC12-223ENST00000497597 ONECUT1Q9UBC0 465 aa8.37□□□□□ -1.07
TRAPPC12-223ENST00000497597 GAGE2DQ9UEU5 116 aa8.37□□□□□ -1.07
TRAPPC12-223ENST00000497597 TRBV19A0A075B6N1 114 aa8.37□□□□□ -1.07
TRAPPC12-223ENST00000497597 CLEC3BP05452 202 aa8.37□□□□□ -1.07
TRAPPC12-223ENST00000497597 GAGE5Q13069 117 aa8.37□□□□□ -1.07
TRAPPC12-223ENST00000497597 GAGE6Q13070 117 aa8.37□□□□□ -1.07
TRAPPC12-223ENST00000497597 Q6AWC8 147 aa8.37□□□□□ -1.07
TRAPPC12-223ENST00000497597 A0A1B0GW15 77 aa8.36□□□□□ -1.07
TRAPPC12-223ENST00000497597 A8MWV9 139 aa8.36□□□□□ -1.07
TRAPPC12-223ENST00000497597 IGLV2-11P01706 119 aa8.36□□□□□ -1.07
TRAPPC12-223ENST00000497597 DPF1Q92782 380 aa8.36□□□□□ -1.07
TRAPPC12-223ENST00000497597 RNF125Q96EQ8 232 aa8.36□□□□□ -1.07
TRAPPC12-223ENST00000497597 SCGB3A1Q96QR1 104 aa8.36□□□□□ -1.07
TRAPPC12-223ENST00000497597 ATP5LO75964 103 aa8.36□□□□□ -1.07
TRAPPC12-223ENST00000497597 TDHQ8IZJ6 230 aa8.36□□□□□ -1.07
TRAPPC12-223ENST00000497597 THAP8Q8NA92 274 aa8.36□□□□□ -1.07
TRAPPC12-223ENST00000497597 IGKV3-7A0A075B6H7 116 aa8.36□□□□□ -1.07
TRAPPC12-223ENST00000497597 WI2-2373I1.2A0A1W2PRP0 233 aa8.36□□□□□ -1.07
TRAPPC12-223ENST00000497597 C9JAW5 83 aa8.36□□□□□ -1.07
TRAPPC12-223ENST00000497597 M0R381 172 aa8.36□□□□□ -1.07
TRAPPC12-223ENST00000497597 IGKV3-15P01624 115 aa8.36□□□□□ -1.07
TRAPPC12-223ENST00000497597 IGHV4-39P01824 125 aa8.36□□□□□ -1.07
TRAPPC12-223ENST00000497597 NFE4Q86UQ8 179 aa8.36□□□□□ -1.07
TRAPPC12-223ENST00000497597 IGHV3-64A0A075B6Q5 118 aa8.35□□□□□ -1.07
TRAPPC12-223ENST00000497597 SLC25A16P16260 332 aa8.35□□□□□ -1.07
TRAPPC12-223ENST00000497597 SORL1Q92673 2214 aa8.35□□□□□ -1.07
TRAPPC12-223ENST00000497597 CEP192Q8TEP8 1941 aa8.35□□□□□ -1.07
TRAPPC12-223ENST00000497597 WT1P19544 449 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC12-223ENST00000497597 TMEM78Q5T7P6 136 aa8.35□□□□□ -1.07
TRAPPC12-223ENST00000497597 TMEM200BQ69YZ2 307 aa8.35□□□□□ -1.07
TRAPPC12-223ENST00000497597 NXT2Q9NPJ8 142 aaKnown RBP8.35□□□□□ -1.07
TRAPPC12-223ENST00000497597 HHLA3Q9XRX5 114 aa8.35□□□□□ -1.07
TRAPPC12-223ENST00000497597 A6NJY4 79 aa8.35□□□□□ -1.07
TRAPPC12-223ENST00000497597 S100A4P26447 101 aaKnown RBP8.35□□□□□ -1.07
TRAPPC12-223ENST00000497597 TMEM155Q4W5P6 130 aa8.35□□□□□ -1.07
TRAPPC12-223ENST00000497597 DYNLRB1Q9NP97 96 aa8.35□□□□□ -1.07
TRAPPC12-223ENST00000497597 ZNF80P51504 273 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC12-223ENST00000497597 LYPD2Q6UXB3 125 aa8.34□□□□□ -1.07
TRAPPC12-223ENST00000497597 PHLDA1Q8WV24 401 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC12-223ENST00000497597 FSTL3O95633 263 aa8.34□□□□□ -1.07
TRAPPC12-223ENST00000497597 IGHV1-46P01743 117 aa8.34□□□□□ -1.07
TRAPPC12-223ENST00000497597 TRGV3P03979 118 aa8.34□□□□□ -1.07
TRAPPC12-223ENST00000497597 SIGLEC15Q6ZMC9 328 aa8.34□□□□□ -1.07
TRAPPC12-223ENST00000497597 PPDPFLQ8WWR9 84 aa8.34□□□□□ -1.07
TRAPPC12-223ENST00000497597 PCSK5Q92824 1860 aa8.34□□□□□ -1.07
TRAPPC12-223ENST00000497597 KLRD1Q13241 179 aa8.33□□□□□ -1.08
TRAPPC12-223ENST00000497597 TMEM170BQ5T4T1 132 aa8.33□□□□□ -1.08
TRAPPC12-223ENST00000497597 PMS2CLQ68D20 193 aa8.33□□□□□ -1.08
TRAPPC12-223ENST00000497597 DTX2Q86UW9 622 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms