RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 RPL27AP46776 148 aaKnown RBP10.3□□□□□ -0.76
GAPVD1-220ENST00000497580 KLRD1Q13241 179 aa10.3□□□□□ -0.76
GAPVD1-220ENST00000497580 SRSF9Q13242 221 aaKnown RBP eCLIP10.3□□□□□ -0.76
GAPVD1-220ENST00000497580 SCGB1D4Q6XE38 83 aa10.3□□□□□ -0.76
GAPVD1-220ENST00000497580 Q6ZT83 130 aa10.3□□□□□ -0.76
GAPVD1-220ENST00000497580 EFNA4P52798 201 aa10.3□□□□□ -0.76
GAPVD1-220ENST00000497580 HERV-K104P63124 156 aa10.3□□□□□ -0.76
GAPVD1-220ENST00000497580 ZFP2Q6ZN57 461 aa10.3□□□□□ -0.76
GAPVD1-220ENST00000497580 ERG28Q9UKR5 140 aa10.3□□□□□ -0.76
GAPVD1-220ENST00000497580 IGKV3-15P01624 115 aa10.3□□□□□ -0.76
GAPVD1-220ENST00000497580 TEX29Q8N6K0 151 aa10.3□□□□□ -0.76
GAPVD1-220ENST00000497580 TLN1Q9Y490 2541 aaKnown RBP10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 PRTN3P24158 256 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 PLGLAQ15195 96 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 MYOZ3Q8TDC0 251 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 DLX4Q92988 240 aaPredicted RBP10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 SCNM1Q9BWG6 230 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 RNF7Q9UBF6 113 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 TNFRSF6BO95407 300 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 CCL8P80075 99 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 ANKRD11Q6UB99 2663 aaPredicted RBP10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 MALRD1Q5VYJ5 2156 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 TRBV19A0A075B6N1 114 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 IGHV3OR16-8A0A075B7F1 116 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 OR11H12B2RN74 326 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 HLA-DRB4P13762 266 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 TNFAIP6P98066 277 aaPredicted RBP10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 C5orf64Q2M2E5 130 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 C3orf36Q3SXR2 165 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 ZFAND6Q6FIF0 208 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 ZNF493Q6ZR52 646 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 OR11H1Q8NG94 326 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 OR11H2Q8NH07 326 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 GAFA1Q96PS6 74 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 AAMDCQ9H7C9 122 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 HLA-DRB4X5D2U9 266 aa10.29□□□□□ -0.76
GAPVD1-220ENST00000497580 SCGB1C2P0DMR2 95 aa10.28□□□□□ -0.76
GAPVD1-220ENST00000497580 SMCPP49901 116 aaPredicted RBP10.28□□□□□ -0.76
GAPVD1-220ENST00000497580 GAGE5Q13069 117 aa10.28□□□□□ -0.76
GAPVD1-220ENST00000497580 GAGE6Q13070 117 aa10.28□□□□□ -0.76
GAPVD1-220ENST00000497580 TRAV26-2A0A0B4J265 109 aa10.28□□□□□ -0.76
GAPVD1-220ENST00000497580 EGR2P11161 476 aaPredicted RBP10.28□□□□□ -0.76
GAPVD1-220ENST00000497580 A0A1W2PNU3 283 aaPredicted RBP10.28□□□□□ -0.76
GAPVD1-220ENST00000497580 SCGB2A1O75556 95 aa10.28□□□□□ -0.76
GAPVD1-220ENST00000497580 TSPAN13O95857 204 aa10.28□□□□□ -0.76
GAPVD1-220ENST00000497580 TECTAO75443 2155 aa10.27□□□□□ -0.77
GAPVD1-220ENST00000497580 SIGLEC15Q6ZMC9 328 aa10.27□□□□□ -0.77
GAPVD1-220ENST00000497580 DEFB104AQ8WTQ1 72 aa10.27□□□□□ -0.77
GAPVD1-220ENST00000497580 VKORC1Q9BQB6 163 aa10.27□□□□□ -0.77
GAPVD1-220ENST00000497580 U3KQK5 164 aa10.27□□□□□ -0.77
GAPVD1-220ENST00000497580 ZNF833PQ6ZTB9 187 aa10.27□□□□□ -0.77
GAPVD1-220ENST00000497580 C1orf210Q8IVY1 113 aa10.27□□□□□ -0.77
GAPVD1-220ENST00000497580 C9orf106Q8NAJ2 232 aa10.27□□□□□ -0.77
GAPVD1-220ENST00000497580 ATRXP46100 2492 aa10.26□□□□□ -0.77
GAPVD1-220ENST00000497580 SVEP1Q4LDE5 3571 aa10.26□□□□□ -0.77
GAPVD1-220ENST00000497580 ATP5LO75964 103 aa10.26□□□□□ -0.77
GAPVD1-220ENST00000497580 H7C2G1 150 aa10.25□□□□□ -0.77
GAPVD1-220ENST00000497580 PAX8Q06710 450 aa10.25□□□□□ -0.77
GAPVD1-220ENST00000497580 CFAP126Q5VTH2 177 aa10.25□□□□□ -0.77
GAPVD1-220ENST00000497580 MORN3Q6PF18 240 aaPredicted RBP10.25□□□□□ -0.77
GAPVD1-220ENST00000497580 PROCRQ9UNN8 238 aa10.25□□□□□ -0.77
GAPVD1-220ENST00000497580 CREBBPQ92793 2442 aa10.25□□□□□ -0.77
GAPVD1-220ENST00000497580 IGHV3-35A0A0C4DH35 117 aa10.25□□□□□ -0.77
GAPVD1-220ENST00000497580 C1orf122Q6ZSJ8 110 aa10.25□□□□□ -0.77
GAPVD1-220ENST00000497580 RELNP78509 3460 aa10.25□□□□□ -0.77
GAPVD1-220ENST00000497580 C3orf56Q8N813 242 aa10.24□□□□□ -0.77
GAPVD1-220ENST00000497580 FBXL15Q9H469 300 aa10.24□□□□□ -0.77
GAPVD1-220ENST00000497580 NXT2Q9NPJ8 142 aaKnown RBP10.24□□□□□ -0.77
GAPVD1-220ENST00000497580 IGLV2-23P01705 113 aa10.24□□□□□ -0.77
GAPVD1-220ENST00000497580 HLA-DMBP28068 263 aa10.24□□□□□ -0.77
GAPVD1-220ENST00000497580 ZNF80P51504 273 aaPredicted RBP10.24□□□□□ -0.77
GAPVD1-220ENST00000497580 FDCSPQ8NFU4 85 aa10.24□□□□□ -0.77
GAPVD1-220ENST00000497580 PPDPFLQ8WWR9 84 aa10.24□□□□□ -0.77
GAPVD1-220ENST00000497580 TRAV8-2A0A0B4J237 113 aa10.24□□□□□ -0.77
GAPVD1-220ENST00000497580 CARD19Q96LW7 228 aa10.24□□□□□ -0.77
GAPVD1-220ENST00000497580 ZNF71Q9NQZ8 489 aaPredicted RBP10.24□□□□□ -0.77
GAPVD1-220ENST00000497580 ARL3P36405 182 aa10.23□□□□□ -0.77
GAPVD1-220ENST00000497580 CTSZQ9UBR2 303 aa10.23□□□□□ -0.77
GAPVD1-220ENST00000497580 RAXQ9Y2V3 346 aa10.23□□□□□ -0.77
GAPVD1-220ENST00000497580 SPG11Q96JI7 2443 aa10.23□□□□□ -0.77
GAPVD1-220ENST00000497580 TRBV7-9A0A0J9YWB2 115 aa10.23□□□□□ -0.77
GAPVD1-220ENST00000497580 ZNF815PA8K554 130 aa10.23□□□□□ -0.77
GAPVD1-220ENST00000497580 GATD1Q8NB37 220 aa10.23□□□□□ -0.77
GAPVD1-220ENST00000497580 IGHV3-23P01764 117 aa10.23□□□□□ -0.77
GAPVD1-220ENST00000497580 CRYGCP07315 174 aa10.23□□□□□ -0.77
GAPVD1-220ENST00000497580 CCL17Q92583 94 aa10.23□□□□□ -0.77
GAPVD1-220ENST00000497580 PCSK5Q92824 1860 aa10.23□□□□□ -0.77
GAPVD1-220ENST00000497580 MYMXA0A1B0GTQ4 84 aa10.22□□□□□ -0.77
GAPVD1-220ENST00000497580 EMP1P54849 157 aa10.22□□□□□ -0.77
GAPVD1-220ENST00000497580 RNF185Q96GF1 192 aa10.22□□□□□ -0.77
GAPVD1-220ENST00000497580 ZMAT4Q9H898 229 aa10.22□□□□□ -0.77
GAPVD1-220ENST00000497580 TRBV7-3A0A075B6L6 115 aa10.22□□□□□ -0.77
GAPVD1-220ENST00000497580 A8MWV9 139 aa10.22□□□□□ -0.77
GAPVD1-220ENST00000497580 CCDC179H3BU77 68 aa10.22□□□□□ -0.77
GAPVD1-220ENST00000497580 IGKV1-17P01599 117 aa10.22□□□□□ -0.77
GAPVD1-220ENST00000497580 SRSF1Q07955 248 aaKnown RBP eCLIP10.22□□□□□ -0.778e-8■□□□□ 11
GAPVD1-220ENST00000497580 DEFB109BQ30KR1 87 aa10.22□□□□□ -0.77
GAPVD1-220ENST00000497580 TMEM78Q5T7P6 136 aa10.22□□□□□ -0.77
GAPVD1-220ENST00000497580 RNF125Q96EQ8 232 aa10.22□□□□□ -0.77
GAPVD1-220ENST00000497580 SHANK2-AS3Q9BTD1 123 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms