RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 PAXXQ9BUH6 204 aa9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 HILPDAQ9Y5L2 63 aa9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 ADGRG4Q8IZF6 3080 aa9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 PEX7O00628 323 aa9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 COX7A2P2O60397 106 aa9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 PAX8Q06710 450 aa9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 C10orf113Q5VZT2 155 aa9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 ADAMTSL5Q6ZMM2 481 aa9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 LINC00322Q6ZN03 302 aaPredicted RBP9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 ZNF329Q86UD4 541 aa9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 TM2D2Q9BX73 214 aa9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 A0A1W2PPM0 123 aa9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 OR4C46A6NHA9 309 aa9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 CCL19Q99731 98 aa9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 PMCHL2Q9BQD1 86 aa9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 ZZEF1O43149 2961 aa9.07□□□□□ -0.96
SNRNP200-208ENST00000497539 A0A0G2JLM5 398 aa9.07□□□□□ -0.96
SNRNP200-208ENST00000497539 H3BUT2 72 aa9.07□□□□□ -0.96
SNRNP200-208ENST00000497539 APELAP0DMC3 54 aa9.07□□□□□ -0.96
SNRNP200-208ENST00000497539 PLGLAQ15195 96 aa9.07□□□□□ -0.96
SNRNP200-208ENST00000497539 RUSC1-AS1Q66K80 236 aa9.07□□□□□ -0.96
SNRNP200-208ENST00000497539 DNAJC30Q96LL9 226 aa9.07□□□□□ -0.96
SNRNP200-208ENST00000497539 TMEM126AQ9H061 195 aa9.07□□□□□ -0.96
SNRNP200-208ENST00000497539 CDIP1Q9H305 208 aa9.07□□□□□ -0.96
SNRNP200-208ENST00000497539 SELENOKQ9Y6D0 94 aa9.07□□□□□ -0.96
SNRNP200-208ENST00000497539 F8W1H4 67 aa9.07□□□□□ -0.96
SNRNP200-208ENST00000497539 ORM2P19652 201 aa9.07□□□□□ -0.96
SNRNP200-208ENST00000497539 ATP5G2Q06055 141 aa9.07□□□□□ -0.96
SNRNP200-208ENST00000497539 PGLYRP4Q96LB8 373 aa9.07□□□□□ -0.96
SNRNP200-208ENST00000497539 TMEM70Q9BUB7 260 aa9.07□□□□□ -0.96
SNRNP200-208ENST00000497539 IGHV3-21A0A0B4J1V1 117 aa9.06□□□□□ -0.96
SNRNP200-208ENST00000497539 K7EIM0 57 aa9.06□□□□□ -0.96
SNRNP200-208ENST00000497539 TMEM97Q5BJF2 176 aa9.06□□□□□ -0.96
SNRNP200-208ENST00000497539 IGLV11-55A0A075B6I3 123 aa9.06□□□□□ -0.96
SNRNP200-208ENST00000497539 PGPA6NDG6 321 aa9.06□□□□□ -0.96
SNRNP200-208ENST00000497539 SLC25A5P05141 298 aaKnown RBP9.06□□□□□ -0.96
SNRNP200-208ENST00000497539 FAM106CPP0CH98 169 aa9.06□□□□□ -0.96
SNRNP200-208ENST00000497539 Q71RC1 249 aaPredicted RBP9.06□□□□□ -0.96
SNRNP200-208ENST00000497539 WIPF2Q8TF74 440 aaPredicted RBP9.06□□□□□ -0.96
SNRNP200-208ENST00000497539 ARPC1AQ92747 370 aa9.06□□□□□ -0.96
SNRNP200-208ENST00000497539 C1RLQ9NZP8 487 aa9.06□□□□□ -0.96
SNRNP200-208ENST00000497539 CT45A10P0DMU9 189 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 MYCNOSP40205 109 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 DSCR9P59020 149 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 FOXE3Q13461 319 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 KLF5Q13887 457 aaPredicted RBP9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 FAM120AOSQ5T036 256 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 LINC00305Q7Z4B0 112 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 FXYD5Q96DB9 178 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 ASCL2Q99929 193 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 SIGLEC8Q9NYZ4 499 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 TMEM14CQ9P0S9 112 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 EPG5Q9HCE0 2579 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 CSMD1Q96PZ7 3565 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 IGHV1-24A0A0C4DH33 117 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 NPFFO15130 113 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 CSN3P07498 182 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 FCGR2BP31994 310 aaPredicted RBP9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 GPR183P32249 361 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 MRAPQ8TCY5 172 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 GTSF1Q8WW33 167 aa9.05□□□□□ -0.96
SNRNP200-208ENST00000497539 USP24Q9UPU5 2620 aa9.04□□□□□ -0.96
SNRNP200-208ENST00000497539 Q8N9W7 124 aa9.04□□□□□ -0.96
SNRNP200-208ENST00000497539 MT-ATP8P03928 68 aa9.04□□□□□ -0.96
SNRNP200-208ENST00000497539 HIST1H1EP10412 219 aaKnown RBP9.04□□□□□ -0.96
SNRNP200-208ENST00000497539 Q6ZUT4 128 aa9.04□□□□□ -0.96
SNRNP200-208ENST00000497539 FAM231DQ6ZW35 169 aa9.04□□□□□ -0.96
SNRNP200-208ENST00000497539 SYS1-DBNDD2H3BUS1 97 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 OR2J3O76001 311 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 LEPROTL1O95214 131 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 EGR2P11161 476 aaPredicted RBP9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 FABP2P12104 132 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 SAA4P35542 130 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 FANCD2OSQ96PS1 177 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 C7orf69Q9H7B7 122 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 EPDR1Q9UM22 224 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 ABCA4P78363 2273 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 COL6A6A6NMZ7 2263 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 A0A087X0K7 114 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 TRAV8-1A0A0A6YYK1 113 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 A0A1B0GXF2 115 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 A0A1W2PRD5 423 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 A0A1W2PRF3 423 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 A0A1W2PRM7 423 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 IGKV1-17P01599 117 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 GP9P14770 177 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 HBBP68871 147 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 NDPQ00604 133 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 HES1Q14469 280 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 RASL11AQ6T310 242 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 ZNF843Q8N446 348 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 NAA38Q9BRA0 125 aaKnown RBP9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 MAP1LC3CQ9BXW4 147 aa9.03□□□□□ -0.96
SNRNP200-208ENST00000497539 IGHV7-81A0A0B4J1V7 117 aa9.02□□□□□ -0.97
SNRNP200-208ENST00000497539 IGHV4-61A0A0C4DH41 118 aa9.02□□□□□ -0.97
SNRNP200-208ENST00000497539 CCDC179H3BU77 68 aa9.02□□□□□ -0.97
SNRNP200-208ENST00000497539 TCTAP57738 103 aa9.02□□□□□ -0.97
SNRNP200-208ENST00000497539 Q6AWC8 147 aa9.02□□□□□ -0.97
SNRNP200-208ENST00000497539 ZFAND6Q6FIF0 208 aa9.02□□□□□ -0.97
SNRNP200-208ENST00000497539 VGLL1Q99990 258 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms