RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 DEFB130BP0DP73 79 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 DEFB130AP0DP74 79 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 RPL7P18124 248 aaKnown RBP3.78□□□□□ -1.8
UBE3C-208ENST00000497368 CXCL2P19875 107 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 TAS2R30P59541 319 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 TAS2R60P59551 318 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 SELENOTP62341 195 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 IFITM3Q01628 133 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 FGL1Q08830 312 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 SAMD13Q5VXD3 122 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 LCN15Q6UWW0 184 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 LINC00305Q7Z4B0 112 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 ZNF546Q86UE3 836 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 UBE2DNLQ8IWF7 75 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 CCDC28AQ8IWP9 274 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 TMEM263Q8WUH6 116 aaKnown RBP3.78□□□□□ -1.8
UBE3C-208ENST00000497368 VSIG2Q96IQ7 327 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 FAM167A-AS1Q96KT0 104 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 C7orf50Q9BRJ6 194 aaKnown RBP3.78□□□□□ -1.8
UBE3C-208ENST00000497368 NPVFQ9HCQ7 196 aa3.78□□□□□ -1.8
UBE3C-208ENST00000497368 TRAV6A0A075B6T7 132 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 UBE2L5PA0A1B0GUS4 154 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 KLLNB2CW77 178 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 F5H768 121 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 LYRM1O43325 122 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 ZNF324O75467 553 aaPredicted RBP3.77□□□□□ -1.81
UBE3C-208ENST00000497368 CST7O76096 145 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 PYYP10082 97 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 S100A5P33763 92 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 FUSP35637 526 aaKnown RBP eCLIP3.77□□□□□ -1.81
UBE3C-208ENST00000497368 CDKN1BP46527 198 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 CD300CQ08708 224 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 ERCC8Q13216 396 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 BTN1A1Q13410 526 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 ESRGQ1W209 222 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 SPANXN2Q5MJ10 180 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 TRIQKQ629K1 86 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 Q6ZTI0 123 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 NRARPQ7Z6K4 114 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 C6orf223Q8N319 242 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 ZFAND2AQ8N6M9 145 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 C15orf53Q8NAA6 179 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 C16orf74Q96GX8 76 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 ODF3Q96PU9 254 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 SLC50A1Q9BRV3 221 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 UPK3BQ9BT76 320 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 SLC25A2Q9BXI2 301 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 NOP10Q9NPE3 64 aaKnown RBP3.77□□□□□ -1.81
UBE3C-208ENST00000497368 NUDT15Q9NV35 164 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 NDUFA13Q9P0J0 144 aa3.77□□□□□ -1.81
UBE3C-208ENST00000497368 LSM5Q9Y4Y9 91 aaKnown RBP3.77□□□□□ -1.81
UBE3C-208ENST00000497368 HMCN2Q8NDA2 5059 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 TRBV19A0A075B6N1 114 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 TRAV26-1A0A087WT03 109 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 A0A096LPF7 62 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 TRAV12-3A0A0B4J271 114 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 CCDC160A6NGH7 325 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 CBY3A6NI87 242 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 KRTAP29-1A8MX34 341 aaPredicted RBP3.76□□□□□ -1.81
UBE3C-208ENST00000497368 J3KRW8 73 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 PRYO14603 147 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 EIF3GO75821 320 aaKnown RBP eCLIP3.76□□□□□ -1.81
UBE3C-208ENST00000497368 TCRBP04435 133 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 ATP5G1P05496 136 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 ATP5G3P48201 142 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 CAMLGP49069 296 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 FAM3BP58499 235 aaPredicted RBP3.76□□□□□ -1.81
UBE3C-208ENST00000497368 RPP30P78346 268 aaKnown RBP3.76□□□□□ -1.81
UBE3C-208ENST00000497368 C1orf134Q5TEV5 83 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 SSX7Q7RTT5 188 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 TMEM256Q8N2U0 113 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 EXOC3-AS1Q8N2X6 119 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 TMEM252Q8N6L7 170 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 OR10P1Q8NGE3 313 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 ZNF431Q8TF32 576 aaPredicted RBP3.76□□□□□ -1.81
UBE3C-208ENST00000497368 PHYHIPLQ96FC7 376 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 LINC01587Q99440 93 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 TMEM208Q9BTX3 173 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 GGACTQ9BVM4 153 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 LYRM2Q9NU23 88 aaPredicted RBP3.76□□□□□ -1.81
UBE3C-208ENST00000497368 SLC39A9Q9NUM3 307 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 OR5AC2Q9NZP5 309 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 TP53TG3Q9ULZ0 132 aa3.76□□□□□ -1.81
UBE3C-208ENST00000497368 IGKV2-40A0A087WW87 121 aaPredicted RBP3.75□□□□□ -1.81
UBE3C-208ENST00000497368 PIGBOS1A0A0B4J2F0 54 aa3.75□□□□□ -1.81
UBE3C-208ENST00000497368 A0A0J9YY99 117 aa3.75□□□□□ -1.81
UBE3C-208ENST00000497368 H7BYZ3 331 aa3.75□□□□□ -1.81
UBE3C-208ENST00000497368 COX7A2P2O60397 106 aa3.75□□□□□ -1.81
UBE3C-208ENST00000497368 SPINK4O60575 86 aa3.75□□□□□ -1.81
UBE3C-208ENST00000497368 ZNF253O75346 499 aa3.75□□□□□ -1.81
UBE3C-208ENST00000497368 CDK2AP2O75956 126 aa3.75□□□□□ -1.81
UBE3C-208ENST00000497368 GAGE7O76087 117 aa3.75□□□□□ -1.81
UBE3C-208ENST00000497368 SIX6O95475 246 aa3.75□□□□□ -1.81
UBE3C-208ENST00000497368 IGKV2D-40P01614 121 aaPredicted RBP3.75□□□□□ -1.81
UBE3C-208ENST00000497368 GAGE12FP0CL80 117 aa3.75□□□□□ -1.81
UBE3C-208ENST00000497368 GAGE12GP0CL81 117 aa3.75□□□□□ -1.81
UBE3C-208ENST00000497368 GAGE12IP0CL82 117 aa3.75□□□□□ -1.81
UBE3C-208ENST00000497368 CRISP2P16562 243 aa3.75□□□□□ -1.81
UBE3C-208ENST00000497368 RPL29P47914 159 aaKnown RBP3.75□□□□□ -1.81
UBE3C-208ENST00000497368 RHOBP62745 196 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms