RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 DIP2AQ14689 1571 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 CEP170BQ9Y4F5 1589 aaPredicted RBP2.46□□□□□ -2.02
SNX13-211ENST00000496855 CCNB3Q8WWL7 1395 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 SPHKAPQ2M3C7 1700 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 RICTORQ6R327 1708 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 COL1A1P02452 1464 aaPredicted RBP2.46□□□□□ -2.02
SNX13-211ENST00000496855 ZFYVE16Q7Z3T8 1539 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 ADAMTS12P58397 1594 aa2.46□□□□□ -2.02
SNX13-211ENST00000496855 TMSB15BA0A087X1C1 80 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 OR2T8A6NH00 312 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 F6UZH7 168 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 PITX3O75364 302 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 CD14P08571 375 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 ZNF345Q14585 488 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 C1orf134Q5TEV5 83 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 Q8N2B8 174 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 MMGT1Q8N4V1 131 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 RGPD1P0DJD0 1748 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 SBF1O95248 1867 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 UHRF1BP1LA0JNW5 1464 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 CACNA1BQ00975 2339 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 CICQ96RK0 1608 aaPredicted RBP2.45□□□□□ -2.02
SNX13-211ENST00000496855 MAST4O15021 2626 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 TRAV1-1A0A0B4J248 108 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 IBA57-AS1B1ANH7 110 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 FAM25AB3EWG3 89 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 FAM25CB3EWG5 89 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 FAM25GB3EWG6 89 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 G3V3Q6 166 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 CORTO00230 105 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 SLC25A4P12235 298 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 SS18Q15532 418 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 DEFB134Q4QY38 66 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 PYDC2Q56P42 97 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 SCN3BQ9NY72 215 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 PRO2289Q9P1D8 64 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 CCL26Q9Y258 94 aa2.45□□□□□ -2.02
SNX13-211ENST00000496855 LSM2Q9Y333 95 aaKnown RBP2.45□□□□□ -2.02
SNX13-211ENST00000496855 ZFHX4Q86UP3 3567 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 ZFC3H1O60293 1989 aaKnown RBP2.44□□□□□ -2.02
SNX13-211ENST00000496855 LAMA2P24043 3122 aaKnown RBP2.44□□□□□ -2.02
SNX13-211ENST00000496855 EFCAB5A4FU69 1503 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 EFCAB6Q5THR3 1501 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 PIEZO1Q92508 2521 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 TANC2Q9HCD6 1990 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 CD3DP04234 171 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 P0C880 135 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 MGST1P10620 155 aaKnown RBP2.44□□□□□ -2.02
SNX13-211ENST00000496855 CCL4P13236 92 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 FABP4P15090 132 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 ZNF90Q03938 601 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 ZNF826PQ6ZT77 177 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 OR4B1Q8NGF8 309 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 CLEC2BQ92478 149 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 MCEEQ96PE7 176 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 NABP2Q9BQ15 211 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 CXCL16Q9H2A7 254 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 PSORS1C2Q9UIG4 136 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 TMEM2Q9UHN6 1383 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 LRRC9Q6ZRR7 1453 aa2.44□□□□□ -2.02
SNX13-211ENST00000496855 NUP188Q5SRE5 1749 aa2.43□□□□□ -2.02
SNX13-211ENST00000496855 TNS1Q9HBL0 1735 aaKnown RBP2.43□□□□□ -2.02
SNX13-211ENST00000496855 MYO16Q9Y6X6 1858 aa2.43□□□□□ -2.02
SNX13-211ENST00000496855 MUC3AQ02505 3323 aa2.43□□□□□ -2.02
SNX13-211ENST00000496855 FAM92AA1XBS5 289 aa2.43□□□□□ -2.02
SNX13-211ENST00000496855 CCDC179H3BU77 68 aa2.43□□□□□ -2.02
SNX13-211ENST00000496855 PMP2P02689 132 aa2.43□□□□□ -2.02
SNX13-211ENST00000496855 BLCAPP62952 87 aa2.43□□□□□ -2.02
SNX13-211ENST00000496855 PLGLB1Q02325 96 aa2.43□□□□□ -2.02
SNX13-211ENST00000496855 RNASE10Q5GAN6 216 aaKnown RBP2.43□□□□□ -2.02
SNX13-211ENST00000496855 PRR9Q5T870 116 aa2.43□□□□□ -2.02
SNX13-211ENST00000496855 OR5D14Q8NGL3 314 aa2.43□□□□□ -2.02
SNX13-211ENST00000496855 OR10AC1Q8NH08 325 aa2.43□□□□□ -2.02
SNX13-211ENST00000496855 Q9BRP9 147 aa2.43□□□□□ -2.02
SNX13-211ENST00000496855 TAS2R4Q9NYW5 299 aa2.43□□□□□ -2.02
SNX13-211ENST00000496855 LHFPL6Q9Y693 200 aa2.43□□□□□ -2.02
SNX13-211ENST00000496855 CASZ1Q86V15 1759 aa2.43□□□□□ -2.02
SNX13-211ENST00000496855 PTPRBP23467 1997 aa2.43□□□□□ -2.02
SNX13-211ENST00000496855 ANKRD11Q6UB99 2663 aaPredicted RBP2.43□□□□□ -2.02
SNX13-211ENST00000496855 MKI67P46013 3256 aaKnown RBP2.42□□□□□ -2.02
SNX13-211ENST00000496855 DIDO1Q9BTC0 2240 aaKnown RBP2.42□□□□□ -2.02
SNX13-211ENST00000496855 IQGAP1P46940 1657 aa2.42□□□□□ -2.02
SNX13-211ENST00000496855 RREB1Q92766 1687 aa2.42□□□□□ -2.02
SNX13-211ENST00000496855 KDM6AO15550 1401 aaPredicted RBP2.42□□□□□ -2.02
SNX13-211ENST00000496855 IGLV10-54A0A075B6I4 117 aa2.42□□□□□ -2.02
SNX13-211ENST00000496855 IGKV3D-11A0A0A0MRZ8 115 aa2.42□□□□□ -2.02
SNX13-211ENST00000496855 A0A1W2PNN7 141 aa2.42□□□□□ -2.02
SNX13-211ENST00000496855 A6NN06 94 aa2.42□□□□□ -2.02
SNX13-211ENST00000496855 SMIM6P0DI80 62 aa2.42□□□□□ -2.02
SNX13-211ENST00000496855 PEBP1P30086 187 aaKnown RBP2.42□□□□□ -2.02
SNX13-211ENST00000496855 DEFB113Q30KQ7 82 aa2.42□□□□□ -2.02
SNX13-211ENST00000496855 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.42□□□□□ -2.02
SNX13-211ENST00000496855 PSMF1Q92530 271 aa2.42□□□□□ -2.02
SNX13-211ENST00000496855 MAGOHBQ96A72 148 aaKnown RBP2.42□□□□□ -2.02
SNX13-211ENST00000496855 DPH3Q96FX2 82 aa2.42□□□□□ -2.02
SNX13-211ENST00000496855 OR4C12Q96R67 309 aa2.42□□□□□ -2.02
SNX13-211ENST00000496855 TCEAL7Q9BRU2 100 aa2.42□□□□□ -2.02
SNX13-211ENST00000496855 NHP2Q9NX24 153 aaKnown RBP2.42□□□□□ -2.02
SNX13-211ENST00000496855 ABCA5Q8WWZ7 1642 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms