RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 CBY3A6NI87 242 aa6.49□□□□□ -1.37
U2AF1-212ENST00000496462 SAMD5Q5TGI4 173 aa6.49□□□□□ -1.37
U2AF1-212ENST00000496462 H7BYZ3 331 aa6.49□□□□□ -1.37
U2AF1-212ENST00000496462 M0R036 132 aa6.49□□□□□ -1.37
U2AF1-212ENST00000496462 S100A8P05109 93 aa6.49□□□□□ -1.37
U2AF1-212ENST00000496462 HLA-DRB4P13762 266 aa6.49□□□□□ -1.37
U2AF1-212ENST00000496462 BTF3L4Q96K17 158 aa6.49□□□□□ -1.37
U2AF1-212ENST00000496462 RARRES2Q99969 163 aa6.49□□□□□ -1.37
U2AF1-212ENST00000496462 PSG8Q9UQ74 426 aa6.49□□□□□ -1.37
U2AF1-212ENST00000496462 HLA-DRB4X5D2U9 266 aa6.49□□□□□ -1.37
U2AF1-212ENST00000496462 TMEM250H0YL14 139 aa6.49□□□□□ -1.37
U2AF1-212ENST00000496462 APOHP02749 345 aaPredicted RBP6.49□□□□□ -1.37
U2AF1-212ENST00000496462 PRR27Q6MZM9 219 aa6.49□□□□□ -1.37
U2AF1-212ENST00000496462 APRG1Q8IVJ8 170 aa6.49□□□□□ -1.37
U2AF1-212ENST00000496462 FABP5P3A8MUU1 101 aa6.48□□□□□ -1.37
U2AF1-212ENST00000496462 CD7P09564 240 aa6.48□□□□□ -1.37
U2AF1-212ENST00000496462 RNASE4P34096 147 aaKnown RBP6.48□□□□□ -1.37
U2AF1-212ENST00000496462 ZNF493Q6ZR52 646 aa6.48□□□□□ -1.37
U2AF1-212ENST00000496462 EXOC3-AS1Q8N2X6 119 aa6.48□□□□□ -1.37
U2AF1-212ENST00000496462 TMPRSS5Q9H3S3 457 aa6.48□□□□□ -1.37
U2AF1-212ENST00000496462 SAV1Q9H4B6 383 aaPredicted RBP6.48□□□□□ -1.37
U2AF1-212ENST00000496462 XCL2Q9UBD3 114 aa6.48□□□□□ -1.37
U2AF1-212ENST00000496462 TRBV7-9A0A0J9YWB2 115 aa6.48□□□□□ -1.37
U2AF1-212ENST00000496462 TCRAP04437 139 aa6.48□□□□□ -1.37
U2AF1-212ENST00000496462 ZNF586Q9NXT0 402 aa6.48□□□□□ -1.37
U2AF1-212ENST00000496462 SMIM9A6NGZ8 99 aa6.48□□□□□ -1.37
U2AF1-212ENST00000496462 SPRY2O43597 315 aa6.48□□□□□ -1.37
U2AF1-212ENST00000496462 P01737 135 aa6.48□□□□□ -1.37
U2AF1-212ENST00000496462 ZNF415Q09FC8 603 aa6.48□□□□□ -1.37
U2AF1-212ENST00000496462 FXYD5Q96DB9 178 aa6.48□□□□□ -1.37
U2AF1-212ENST00000496462 PPP1R2P9O14990 202 aa6.47□□□□□ -1.37
U2AF1-212ENST00000496462 MT-ND4LP03901 98 aa6.47□□□□□ -1.37
U2AF1-212ENST00000496462 NMBP08949 121 aa6.47□□□□□ -1.37
U2AF1-212ENST00000496462 IGF2BP2-AS1Q96M15 143 aa6.47□□□□□ -1.37
U2AF1-212ENST00000496462 ODF3Q96PU9 254 aa6.47□□□□□ -1.37
U2AF1-212ENST00000496462 A0A0J9YX75 114 aa6.47□□□□□ -1.37
U2AF1-212ENST00000496462 RAB19A4D1S5 217 aa6.47□□□□□ -1.37
U2AF1-212ENST00000496462 GATCO43716 136 aaKnown RBP6.47□□□□□ -1.37
U2AF1-212ENST00000496462 IGHV4-30-4P0DP06 118 aa6.47□□□□□ -1.37
U2AF1-212ENST00000496462 BEAN1Q3B7T3 259 aa6.47□□□□□ -1.37
U2AF1-212ENST00000496462 UQCC3Q6UW78 93 aa6.47□□□□□ -1.37
U2AF1-212ENST00000496462 CLLU1Q5K131 121 aa6.47□□□□□ -1.37
U2AF1-212ENST00000496462 RNF182Q8N6D2 247 aa6.47□□□□□ -1.37
U2AF1-212ENST00000496462 PCNPQ8WW12 178 aaKnown RBP6.47□□□□□ -1.37
U2AF1-212ENST00000496462 SLC35B3Q9H1N7 401 aa6.47□□□□□ -1.37
U2AF1-212ENST00000496462 TIMM8BQ9Y5J9 83 aaPredicted RBP6.47□□□□□ -1.37
U2AF1-212ENST00000496462 C7orf71A4D174 169 aa6.46□□□□□ -1.37
U2AF1-212ENST00000496462 DIRC3C9JPN6 131 aa6.46□□□□□ -1.37
U2AF1-212ENST00000496462 F8W036 122 aa6.46□□□□□ -1.37
U2AF1-212ENST00000496462 IGLC2P0DOY2 106 aa6.46□□□□□ -1.37
U2AF1-212ENST00000496462 ASIPP42127 132 aa6.46□□□□□ -1.37
U2AF1-212ENST00000496462 TMEM241Q24JQ0 296 aa6.46□□□□□ -1.37
U2AF1-212ENST00000496462 PYGO2Q9BRQ0 406 aa6.46□□□□□ -1.37
U2AF1-212ENST00000496462 IGKV2-40A0A087WW87 121 aaPredicted RBP6.46□□□□□ -1.38
U2AF1-212ENST00000496462 GCGP01275 180 aa6.46□□□□□ -1.38
U2AF1-212ENST00000496462 IGKV2D-40P01614 121 aaPredicted RBP6.46□□□□□ -1.38
U2AF1-212ENST00000496462 ADIRFQ15847 76 aa6.46□□□□□ -1.38
U2AF1-212ENST00000496462 TMEM75Q8N9X5 138 aa6.46□□□□□ -1.38
U2AF1-212ENST00000496462 SVIPQ8NHG7 77 aa6.46□□□□□ -1.38
U2AF1-212ENST00000496462 FAM74A7A6NL05 159 aa6.46□□□□□ -1.38
U2AF1-212ENST00000496462 H3BQ15 152 aa6.46□□□□□ -1.38
U2AF1-212ENST00000496462 M0R3E3 92 aa6.46□□□□□ -1.38
U2AF1-212ENST00000496462 SPINK13Q1W4C9 94 aa6.46□□□□□ -1.38
U2AF1-212ENST00000496462 Q6ZWC4 215 aa6.46□□□□□ -1.38
U2AF1-212ENST00000496462 TPPP3Q9BW30 176 aa6.46□□□□□ -1.38
U2AF1-212ENST00000496462 TRRAPQ9Y4A5 3859 aa6.46□□□□□ -1.38
U2AF1-212ENST00000496462 VWFP04275 2813 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 H3BMM0 161 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 ERVFC1-1P60608 527 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 FAM162BQ5T6X4 162 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 IGFL4Q6B9Z1 124 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 KCNIP4Q6PIL6 250 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 NEU1Q99519 415 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 AURKAIP1Q9NWT8 199 aaPredicted RBP6.45□□□□□ -1.38
U2AF1-212ENST00000496462 LOC102723971A0A1B0GUV8 181 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 CXorf65A6NEN9 183 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 NDUFB4O95168 129 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 PRB2P02812 416 aaPredicted RBP6.45□□□□□ -1.38
U2AF1-212ENST00000496462 EGFEM1PQ0D2K5 195 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 RHEBQ15382 184 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 ZNF506Q5JVG8 444 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 COMMD7Q86VX2 200 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 EIF4E3Q8N5X7 224 aaKnown RBP6.45□□□□□ -1.38
U2AF1-212ENST00000496462 NAT8Q9UHE5 227 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 TRGV2A0A075B6R0 118 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 WIPF1O43516 503 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 EMP1P54849 157 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 PNRC1Q12796 327 aaPredicted RBP6.45□□□□□ -1.38
U2AF1-212ENST00000496462 FAM167A-AS1Q96KT0 104 aa6.45□□□□□ -1.38
U2AF1-212ENST00000496462 FRMD6-AS1P0C7T7 363 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 FXYD7P58549 80 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 OR11H2Q8NH07 326 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 DCANP1Q8TF63 244 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 SMIM12Q96EX1 92 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 PHLDA3Q9Y5J5 127 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 TRAV12-3A0A0B4J271 114 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 IZUMO1RA6ND01 250 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 ZNF705GA8MUZ8 300 aaPredicted RBP6.44□□□□□ -1.38
U2AF1-212ENST00000496462 SPART-AS1P0CW21 52 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 MIFP14174 115 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms