RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 SEC11AP67812 179 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 IL15RAQ13261 267 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 SPATA45Q537H7 98 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 MORN3Q6PF18 240 aaPredicted RBP2.93□□□□□ -1.94
SF3B1-212ENST00000496458 GOLT1AQ6ZVE7 132 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 MARCH3Q86UD3 253 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 MSRB3Q8IXL7 192 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 DEFB106AQ8N104 65 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 LINC00471Q8N535 108 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 TTC9CQ8N5M4 171 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 SLC25A29Q8N8R3 303 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 TMEM105Q8N8V8 129 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 OR5H2Q8NGV7 314 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 CT55Q8WUE5 264 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 PP6455Q8WZ26 134 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 AQP3Q92482 292 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 MCEEQ96PE7 176 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 GPER1Q99527 375 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 TMEM133Q9H2Q1 129 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 POPDC3Q9HBV1 291 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 TAC3Q9UHF0 121 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 PRNDQ9UKY0 176 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 CEP192Q8TEP8 1941 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 DNAH14Q0VDD8 3507 aa2.93□□□□□ -1.94
SF3B1-212ENST00000496458 EML5Q05BV3 1969 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 NUP210LQ5VU65 1888 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 ZFYVE26Q68DK2 2539 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 IGHV5-51A0A0C4DH38 117 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 OR4C45A6NMZ5 311 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 CDC42EP2O14613 210 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 OR1I1O60431 355 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 SLC25A14O95258 325 aaPredicted RBP2.92□□□□□ -1.94
SF3B1-212ENST00000496458 SFT2D2O95562 160 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 FSTL3O95633 263 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 CISD3P0C7P0 127 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 LINC00032P0C843 101 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 TLX1NBP0CAT3 122 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 HIST1H1DP16402 221 aaKnown RBP2.92□□□□□ -1.94
SF3B1-212ENST00000496458 EVI2AP22794 236 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 FOXA1P55317 472 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 SMIM11AP58511 58 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 RPS28P62857 69 aaKnown RBP2.92□□□□□ -1.94
SF3B1-212ENST00000496458 ADIRFQ15847 76 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 MRPL2Q5T653 305 aaKnown RBP2.92□□□□□ -1.94
SF3B1-212ENST00000496458 HES3Q5TGS1 186 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 ZFAND6Q6FIF0 208 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 Q6ZS52 159 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 DAZ4Q86SG3 579 aaKnown RBP2.92□□□□□ -1.94
SF3B1-212ENST00000496458 OSR2Q8N2R0 312 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 ZDHHC22Q8N966 263 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 CMTM2Q8TAZ6 248 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 RBMXL1Q96E39 390 aaKnown RBP2.92□□□□□ -1.94
SF3B1-212ENST00000496458 S100A16Q96FQ6 103 aaKnown RBP2.92□□□□□ -1.94
SF3B1-212ENST00000496458 HSPB9Q9BQS6 159 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 WDR61Q9GZS3 305 aaKnown RBP2.92□□□□□ -1.94
SF3B1-212ENST00000496458 ST20Q9HBF5 79 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 NPVFQ9HCQ7 196 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 GPR84Q9NQS5 396 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 DAZ1Q9NQZ3 744 aaKnown RBP2.92□□□□□ -1.94
SF3B1-212ENST00000496458 PRTFDC1Q9NRG1 225 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 C8orf17Q9NRJ1 99 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 ANAPC10Q9UM13 185 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 AHCTF1Q8WYP5 2266 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 UNC13CQ8NB66 2214 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 AKAP13Q12802 2813 aa2.92□□□□□ -1.94
SF3B1-212ENST00000496458 NUP214P35658 2090 aaPredicted RBP2.91□□□□□ -1.94
SF3B1-212ENST00000496458 COL4A2P08572 1712 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 APC2O95996 2303 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 CACNA1BQ00975 2339 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 IGHV5-10-1A0A0J9YXX1 117 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 A0A1B0GX51 115 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 A0A1W2PRE2 83 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 ODAMA1E959 279 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 OR2T8A6NH00 312 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 TMEM212A6NML5 194 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 KNCNA6PVL3 124 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 FABP5P3A8MUU1 101 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 C17orf112F2Z3M2 114 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 H3BRM9 83 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 M0R381 172 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 HMGB3O15347 200 aaKnown RBP2.91□□□□□ -1.94
SF3B1-212ENST00000496458 APOMO95445 188 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 CYB5AP00167 134 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 IGKV1-39P01597 117 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 IGLV3-27P01718 113 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 IGKV1D-39P04432 117 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 LINC00869P0C866 280 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 PTHLHP12272 177 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 ORM2P19652 201 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 CSRP1P21291 193 aaKnown RBP2.91□□□□□ -1.94
SF3B1-212ENST00000496458 CNTFRP26992 372 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 CXCL12P48061 93 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 ZNF83P51522 516 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 OR8B8Q15620 311 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 C12orf74Q32Q52 190 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 BVES-AS1Q5T3Y7 98 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 Q5W150 140 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 ZNF322Q6U7Q0 402 aaPredicted RBP2.91□□□□□ -1.94
SF3B1-212ENST00000496458 DPPA3Q6W0C5 159 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 TMEM229BQ8NBD8 167 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms