RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 RPL12P30050 165 aaKnown RBP11.07□□□□□ -0.64
HDAC4-213ENST00000496347 ICAM4Q14773 271 aa11.07□□□□□ -0.64
HDAC4-213ENST00000496347 LGALS9BQ3B8N2 356 aa11.07□□□□□ -0.64
HDAC4-213ENST00000496347 KHDC3LQ587J8 217 aa11.07□□□□□ -0.64
HDAC4-213ENST00000496347 C9orf47Q6ZRZ4 202 aa11.07□□□□□ -0.64
HDAC4-213ENST00000496347 ZNF680Q8NEM1 530 aa11.07□□□□□ -0.64
HDAC4-213ENST00000496347 FAM19A4Q96LR4 140 aa11.07□□□□□ -0.64
HDAC4-213ENST00000496347 SNURFLB1AK76 121 aa11.06□□□□□ -0.64
HDAC4-213ENST00000496347 F5H768 121 aa11.06□□□□□ -0.64
HDAC4-213ENST00000496347 J3KRW8 73 aa11.06□□□□□ -0.64
HDAC4-213ENST00000496347 OR7C2O60412 319 aa11.06□□□□□ -0.64
HDAC4-213ENST00000496347 TAS2R45P59539 299 aa11.06□□□□□ -0.64
HDAC4-213ENST00000496347 UBE2L3P68036 154 aaKnown RBP11.06□□□□□ -0.64
HDAC4-213ENST00000496347 FCN2Q15485 313 aa11.06□□□□□ -0.64
HDAC4-213ENST00000496347 FFAR4Q5NUL3 377 aa11.06□□□□□ -0.64
HDAC4-213ENST00000496347 TMEM78Q5T7P6 136 aa11.06□□□□□ -0.64
HDAC4-213ENST00000496347 SCGB1C1Q8TD33 95 aa11.06□□□□□ -0.64
HDAC4-213ENST00000496347 LINC00467Q9BRT7 94 aa11.06□□□□□ -0.64
HDAC4-213ENST00000496347 IGKV2-40A0A087WW87 121 aaPredicted RBP11.05□□□□□ -0.64
HDAC4-213ENST00000496347 TRBV7-9A0A0J9YWB2 115 aa11.05□□□□□ -0.64
HDAC4-213ENST00000496347 IGKV2D-40P01614 121 aaPredicted RBP11.05□□□□□ -0.64
HDAC4-213ENST00000496347 OR10J4P0C629 311 aa11.05□□□□□ -0.64
HDAC4-213ENST00000496347 FAM122CQ6P4D5 195 aa11.05□□□□□ -0.64
HDAC4-213ENST00000496347 LYPD1Q8N2G4 141 aa11.05□□□□□ -0.64
HDAC4-213ENST00000496347 RNF141Q8WVD5 230 aa11.05□□□□□ -0.64
HDAC4-213ENST00000496347 PHYHIPLQ96FC7 376 aa11.05□□□□□ -0.64
HDAC4-213ENST00000496347 AGPAT4-IT1Q9H0P7 198 aa11.05□□□□□ -0.64
HDAC4-213ENST00000496347 ALG5Q9Y673 324 aa11.05□□□□□ -0.64
HDAC4-213ENST00000496347 DAZ2Q13117 558 aaKnown RBP11.04□□□□□ -0.64
HDAC4-213ENST00000496347 ERCC8Q13216 396 aa11.04□□□□□ -0.64
HDAC4-213ENST00000496347 SMIM3Q9BZL3 60 aa11.04□□□□□ -0.64
HDAC4-213ENST00000496347 RBAKDNA6NC62 111 aa11.03□□□□□ -0.64
HDAC4-213ENST00000496347 CSN1S1P47710 185 aa11.03□□□□□ -0.64
HDAC4-213ENST00000496347 BTN1A1Q13410 526 aa11.03□□□□□ -0.64
HDAC4-213ENST00000496347 ANXA2RQ3ZCQ2 193 aa11.03□□□□□ -0.64
HDAC4-213ENST00000496347 Q6ZR54 194 aa11.03□□□□□ -0.64
HDAC4-213ENST00000496347 ZFAND2AQ8N6M9 145 aa11.03□□□□□ -0.64
HDAC4-213ENST00000496347 ZNF503Q96F45 646 aa11.03□□□□□ -0.64
HDAC4-213ENST00000496347 ATG101Q9BSB4 218 aa11.03□□□□□ -0.64
HDAC4-213ENST00000496347 MUC4Q99102 2169 aa11.03□□□□□ -0.64
HDAC4-213ENST00000496347 DNAH17Q9UFH2 4485 aa11.02□□□□□ -0.64
HDAC4-213ENST00000496347 ZNF324O75467 553 aaPredicted RBP11.02□□□□□ -0.65
HDAC4-213ENST00000496347 GPX1P07203 203 aa11.02□□□□□ -0.65
HDAC4-213ENST00000496347 CD300CQ08708 224 aa11.02□□□□□ -0.65
HDAC4-213ENST00000496347 ZNF266Q14584 549 aa11.02□□□□□ -0.65
HDAC4-213ENST00000496347 C11orf72Q8NBR9 251 aa11.02□□□□□ -0.65
HDAC4-213ENST00000496347 ASB13Q8WXK3 278 aa11.02□□□□□ -0.65
HDAC4-213ENST00000496347 VGLL1Q99990 258 aa11.02□□□□□ -0.65
HDAC4-213ENST00000496347 Q9H3A6 140 aa11.02□□□□□ -0.65
HDAC4-213ENST00000496347 ZNF492Q9P255 531 aa11.02□□□□□ -0.65
HDAC4-213ENST00000496347 NUDT3O95989 172 aa11.01□□□□□ -0.65
HDAC4-213ENST00000496347 M6PRP20645 277 aa11.01□□□□□ -0.65
HDAC4-213ENST00000496347 ZNF138P52744 262 aa11.01□□□□□ -0.65
HDAC4-213ENST00000496347 ACOT6Q3I5F7 207 aaPredicted RBP11.01□□□□□ -0.65
HDAC4-213ENST00000496347 IBA57Q5T440 356 aaKnown RBP11.01□□□□□ -0.65
HDAC4-213ENST00000496347 PQLC2Q6ZP29 291 aa11.01□□□□□ -0.65
HDAC4-213ENST00000496347 EIF4E3Q8N5X7 224 aaKnown RBP11.01□□□□□ -0.65
HDAC4-213ENST00000496347 C18orf15Q96N68 181 aa11.01□□□□□ -0.65
HDAC4-213ENST00000496347 IGLV2-18A0A075B6J9 118 aa11□□□□□ -0.65
HDAC4-213ENST00000496347 GAGE12BA1L429 117 aa11□□□□□ -0.65
HDAC4-213ENST00000496347 M0R2N4 97 aa11□□□□□ -0.65
HDAC4-213ENST00000496347 GAGE7O76087 117 aa11□□□□□ -0.65
HDAC4-213ENST00000496347 GAGE12FP0CL80 117 aa11□□□□□ -0.65
HDAC4-213ENST00000496347 GAGE12GP0CL81 117 aa11□□□□□ -0.65
HDAC4-213ENST00000496347 GAGE12IP0CL82 117 aa11□□□□□ -0.65
HDAC4-213ENST00000496347 RNASE4P34096 147 aaKnown RBP11□□□□□ -0.65
HDAC4-213ENST00000496347 CCL18P55774 89 aa11□□□□□ -0.65
HDAC4-213ENST00000496347 TCL1AP56279 114 aa11□□□□□ -0.65
HDAC4-213ENST00000496347 RANP62826 216 aaKnown RBP11□□□□□ -0.65
HDAC4-213ENST00000496347 SOHLH1Q5JUK2 328 aa11□□□□□ -0.65
HDAC4-213ENST00000496347 Q8TAT8 98 aa11□□□□□ -0.65
HDAC4-213ENST00000496347 MED28Q9H204 178 aa11□□□□□ -0.65
HDAC4-213ENST00000496347 WFDC1Q9HC57 220 aa11□□□□□ -0.65
HDAC4-213ENST00000496347 TRAV26-1A0A087WT03 109 aa10.99□□□□□ -0.65
HDAC4-213ENST00000496347 H3BNG1 76 aa10.99□□□□□ -0.65
HDAC4-213ENST00000496347 RGS13O14921 159 aa10.99□□□□□ -0.65
HDAC4-213ENST00000496347 RTL8CO15255 209 aa10.99□□□□□ -0.65
HDAC4-213ENST00000496347 PRR9Q5T870 116 aa10.99□□□□□ -0.65
HDAC4-213ENST00000496347 Q6ZTI0 123 aa10.99□□□□□ -0.65
HDAC4-213ENST00000496347 RXFP4Q8TDU9 374 aa10.99□□□□□ -0.65
HDAC4-213ENST00000496347 TMED6Q8WW62 240 aa10.99□□□□□ -0.65
HDAC4-213ENST00000496347 GNPNAT1Q96EK6 184 aaPredicted RBP10.99□□□□□ -0.65
HDAC4-213ENST00000496347 AQP10Q96PS8 301 aa10.99□□□□□ -0.65
HDAC4-213ENST00000496347 TMPRSS5Q9H3S3 457 aa10.99□□□□□ -0.65
HDAC4-213ENST00000496347 OTORQ9NRC9 128 aa10.99□□□□□ -0.65
HDAC4-213ENST00000496347 GSN-AS1Q9NRJ2 163 aa10.99□□□□□ -0.65
HDAC4-213ENST00000496347 LENEPQ9Y5L5 61 aa10.99□□□□□ -0.65
HDAC4-213ENST00000496347 A0A1W2PPV4 95 aa10.98□□□□□ -0.65
HDAC4-213ENST00000496347 FAM74A1Q5RGS3 127 aa10.98□□□□□ -0.65
HDAC4-213ENST00000496347 OR2G3Q8NGZ4 309 aa10.98□□□□□ -0.65
HDAC4-213ENST00000496347 ARPC5LQ9BPX5 153 aa10.98□□□□□ -0.65
HDAC4-213ENST00000496347 TRGV2A0A075B6R0 118 aa10.97□□□□□ -0.65
HDAC4-213ENST00000496347 IGHV1OR15-1A0A075B7D0 117 aa10.97□□□□□ -0.65
HDAC4-213ENST00000496347 PRSS29PA6NIE9 313 aa10.97□□□□□ -0.65
HDAC4-213ENST00000496347 DIRC3C9JPN6 131 aa10.97□□□□□ -0.65
HDAC4-213ENST00000496347 GIPP09681 153 aaPredicted RBP10.97□□□□□ -0.65
HDAC4-213ENST00000496347 HOXA5P20719 270 aa10.97□□□□□ -0.65
HDAC4-213ENST00000496347 RAB2AP61019 212 aa10.97□□□□□ -0.65
HDAC4-213ENST00000496347 OR5I1Q13606 314 aa10.97□□□□□ -0.65
HDAC4-213ENST00000496347 ARL6IP6Q8N6S5 226 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms