RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 GAGE7O76087 117 aa8.92□□□□□ -0.98
PTPRF-214ENST00000496043 GPX1P07203 203 aa8.92□□□□□ -0.98
PTPRF-214ENST00000496043 GAGE12FP0CL80 117 aa8.92□□□□□ -0.98
PTPRF-214ENST00000496043 GAGE12GP0CL81 117 aa8.92□□□□□ -0.98
PTPRF-214ENST00000496043 GAGE12IP0CL82 117 aa8.92□□□□□ -0.98
PTPRF-214ENST00000496043 RNASE4P34096 147 aaKnown RBP8.92□□□□□ -0.98
PTPRF-214ENST00000496043 H2BFSP57053 126 aa8.92□□□□□ -0.98
PTPRF-214ENST00000496043 DAZ2Q13117 558 aaKnown RBP8.92□□□□□ -0.98
PTPRF-214ENST00000496043 C9orf47Q6ZRZ4 202 aa8.92□□□□□ -0.98
PTPRF-214ENST00000496043 LINC00612Q8N6U2 182 aa8.92□□□□□ -0.98
PTPRF-214ENST00000496043 RNF141Q8WVD5 230 aa8.92□□□□□ -0.98
PTPRF-214ENST00000496043 FAM19A4Q96LR4 140 aa8.92□□□□□ -0.98
PTPRF-214ENST00000496043 PAXXQ9BUH6 204 aa8.92□□□□□ -0.98
PTPRF-214ENST00000496043 MRPL32Q9BYC8 188 aaKnown RBP8.92□□□□□ -0.98
PTPRF-214ENST00000496043 KLLNB2CW77 178 aa8.91□□□□□ -0.98
PTPRF-214ENST00000496043 ZNF324O75467 553 aaPredicted RBP8.91□□□□□ -0.98
PTPRF-214ENST00000496043 NMBP08949 121 aa8.91□□□□□ -0.98
PTPRF-214ENST00000496043 PET100P0DJ07 73 aa8.91□□□□□ -0.98
PTPRF-214ENST00000496043 M6PRP20645 277 aa8.91□□□□□ -0.98
PTPRF-214ENST00000496043 TMEM78Q5T7P6 136 aa8.91□□□□□ -0.98
PTPRF-214ENST00000496043 FAM122CQ6P4D5 195 aa8.91□□□□□ -0.98
PTPRF-214ENST00000496043 SCGB1C1Q8TD33 95 aa8.91□□□□□ -0.98
PTPRF-214ENST00000496043 GNPNAT1Q96EK6 184 aaPredicted RBP8.91□□□□□ -0.98
PTPRF-214ENST00000496043 ATP5SQ99766 215 aa8.91□□□□□ -0.98
PTPRF-214ENST00000496043 LINC00467Q9BRT7 94 aa8.91□□□□□ -0.98
PTPRF-214ENST00000496043 FUT9Q9Y231 359 aa8.91□□□□□ -0.98
PTPRF-214ENST00000496043 DNAH17Q9UFH2 4485 aa8.91□□□□□ -0.98
PTPRF-214ENST00000496043 TRAV26-1A0A087WT03 109 aa8.9□□□□□ -0.98
PTPRF-214ENST00000496043 MPC2O95563 127 aa8.9□□□□□ -0.98
PTPRF-214ENST00000496043 IFNA5P01569 189 aa8.9□□□□□ -0.98
PTPRF-214ENST00000496043 OR10J4P0C629 311 aa8.9□□□□□ -0.98
PTPRF-214ENST00000496043 CRISP2P16562 243 aa8.9□□□□□ -0.98
PTPRF-214ENST00000496043 CD300CQ08708 224 aa8.9□□□□□ -0.98
PTPRF-214ENST00000496043 ANXA2RQ3ZCQ2 193 aa8.9□□□□□ -0.98
PTPRF-214ENST00000496043 EIF4E3Q8N5X7 224 aaKnown RBP8.9□□□□□ -0.98
PTPRF-214ENST00000496043 ZNF680Q8NEM1 530 aa8.9□□□□□ -0.98
PTPRF-214ENST00000496043 ZNRF2Q8NHG8 242 aa8.9□□□□□ -0.98
PTPRF-214ENST00000496043 RXFP4Q8TDU9 374 aa8.9□□□□□ -0.98
PTPRF-214ENST00000496043 ZNF503Q96F45 646 aa8.9□□□□□ -0.98
PTPRF-214ENST00000496043 VGLL1Q99990 258 aa8.9□□□□□ -0.98
PTPRF-214ENST00000496043 GSN-AS1Q9NRJ2 163 aa8.9□□□□□ -0.98
PTPRF-214ENST00000496043 LINC00588Q9Y4M8 146 aa8.9□□□□□ -0.98
PTPRF-214ENST00000496043 HSPB11Q9Y547 144 aa8.9□□□□□ -0.98
PTPRF-214ENST00000496043 IGKV2-40A0A087WW87 121 aaPredicted RBP8.89□□□□□ -0.99
PTPRF-214ENST00000496043 IGKV2D-40P01614 121 aaPredicted RBP8.89□□□□□ -0.99
PTPRF-214ENST00000496043 RPL12P30050 165 aaKnown RBP8.89□□□□□ -0.99
PTPRF-214ENST00000496043 CSN1S1P47710 185 aa8.89□□□□□ -0.99
PTPRF-214ENST00000496043 BTN1A1Q13410 526 aa8.89□□□□□ -0.99
PTPRF-214ENST00000496043 FFAR4Q5NUL3 377 aa8.89□□□□□ -0.99
PTPRF-214ENST00000496043 Q6ZTI0 123 aa8.89□□□□□ -0.99
PTPRF-214ENST00000496043 SSX7Q7RTT5 188 aa8.89□□□□□ -0.99
PTPRF-214ENST00000496043 LYPD1Q8N2G4 141 aa8.89□□□□□ -0.99
PTPRF-214ENST00000496043 FXYD5Q96DB9 178 aa8.89□□□□□ -0.99
PTPRF-214ENST00000496043 ZNF492Q9P255 531 aa8.89□□□□□ -0.99
PTPRF-214ENST00000496043 DNAH2Q9P225 4427 aa8.89□□□□□ -0.99
PTPRF-214ENST00000496043 TRGV2A0A075B6R0 118 aa8.88□□□□□ -0.99
PTPRF-214ENST00000496043 A0A0J9YY99 117 aa8.88□□□□□ -0.99
PTPRF-214ENST00000496043 NBDYA0A0U1RRE5 68 aa8.88□□□□□ -0.99
PTPRF-214ENST00000496043 H3BNG1 76 aa8.88□□□□□ -0.99
PTPRF-214ENST00000496043 RGS13O14921 159 aa8.88□□□□□ -0.99
PTPRF-214ENST00000496043 OR7C2O60412 319 aa8.88□□□□□ -0.99
PTPRF-214ENST00000496043 HOXA5P20719 270 aa8.88□□□□□ -0.99
PTPRF-214ENST00000496043 ZNF138P52744 262 aa8.88□□□□□ -0.99
PTPRF-214ENST00000496043 RANP62826 216 aaKnown RBP8.88□□□□□ -0.99
PTPRF-214ENST00000496043 TRBV7-9A0A0J9YWB2 115 aa8.87□□□□□ -0.99
PTPRF-214ENST00000496043 TAS2R45P59539 299 aa8.87□□□□□ -0.99
PTPRF-214ENST00000496043 ZFAND2AQ8N6M9 145 aa8.87□□□□□ -0.99
PTPRF-214ENST00000496043 C11orf72Q8NBR9 251 aa8.87□□□□□ -0.99
PTPRF-214ENST00000496043 C18orf15Q96N68 181 aa8.87□□□□□ -0.99
PTPRF-214ENST00000496043 SMIM3Q9BZL3 60 aa8.87□□□□□ -0.99
PTPRF-214ENST00000496043 Q9H8V8 135 aa8.87□□□□□ -0.99
PTPRF-214ENST00000496043 KLF12Q9Y4X4 402 aa8.87□□□□□ -0.99
PTPRF-214ENST00000496043 HECTD4Q9Y4D8 3996 aa8.87□□□□□ -0.99
PTPRF-214ENST00000496043 FAT2Q9NYQ8 4349 aa8.86□□□□□ -0.99
PTPRF-214ENST00000496043 NACAE9PAV3 2078 aa8.86□□□□□ -0.99
PTPRF-214ENST00000496043 IGHV1OR15-1A0A075B7D0 117 aa8.86□□□□□ -0.99
PTPRF-214ENST00000496043 TRGV1A0A0A0MS02 117 aa8.86□□□□□ -0.99
PTPRF-214ENST00000496043 RBAKDNA6NC62 111 aa8.86□□□□□ -0.99
PTPRF-214ENST00000496043 KHDC3LQ587J8 217 aa8.86□□□□□ -0.99
PTPRF-214ENST00000496043 IBA57Q5T440 356 aaKnown RBP8.86□□□□□ -0.99
PTPRF-214ENST00000496043 C6orf223Q8N319 242 aa8.86□□□□□ -0.99
PTPRF-214ENST00000496043 PHYHIPLQ96FC7 376 aa8.86□□□□□ -0.99
PTPRF-214ENST00000496043 Q9H3A6 140 aa8.86□□□□□ -0.99
PTPRF-214ENST00000496043 TMPRSS5Q9H3S3 457 aa8.86□□□□□ -0.99
PTPRF-214ENST00000496043 MBD2Q9UBB5 411 aa8.86□□□□□ -0.99
PTPRF-214ENST00000496043 HERC2O95714 4834 aa8.86□□□□□ -0.99
PTPRF-214ENST00000496043 A0A1W2PPV4 95 aa8.85□□□□□ -0.99
PTPRF-214ENST00000496043 SPINK4O60575 86 aa8.85□□□□□ -0.99
PTPRF-214ENST00000496043 MED14OSP0DP75 135 aa8.85□□□□□ -0.99
PTPRF-214ENST00000496043 TCL1AP56279 114 aa8.85□□□□□ -0.99
PTPRF-214ENST00000496043 UBE2L3P68036 154 aaKnown RBP8.85□□□□□ -0.99
PTPRF-214ENST00000496043 ESRGQ1W209 222 aa8.85□□□□□ -0.99
PTPRF-214ENST00000496043 ACOT6Q3I5F7 207 aaPredicted RBP8.85□□□□□ -0.99
PTPRF-214ENST00000496043 ARPC5LQ9BPX5 153 aa8.85□□□□□ -0.99
PTPRF-214ENST00000496043 TP53TG3Q9ULZ0 132 aa8.85□□□□□ -0.99
PTPRF-214ENST00000496043 PGPA6NDG6 321 aa8.84□□□□□ -0.99
PTPRF-214ENST00000496043 DIRC3C9JPN6 131 aa8.84□□□□□ -0.99
PTPRF-214ENST00000496043 ZNF266Q14584 549 aa8.84□□□□□ -0.99
PTPRF-214ENST00000496043 FAM74A1Q5RGS3 127 aa8.84□□□□□ -0.99
PTPRF-214ENST00000496043 PRR9Q5T870 116 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms