RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 K7EMT4 169 aa12.45□□□□□ -0.42
CBX4-204ENST00000495122 ELANEP08246 267 aa12.45□□□□□ -0.42
CBX4-204ENST00000495122 CT45A10P0DMU9 189 aa12.45□□□□□ -0.42
CBX4-204ENST00000495122 BMI1P35226 326 aa12.45□□□□□ -0.42
CBX4-204ENST00000495122 FOXE3Q13461 319 aa12.45□□□□□ -0.42
CBX4-204ENST00000495122 Q6AWC8 147 aa12.45□□□□□ -0.42
CBX4-204ENST00000495122 OR4X2Q8NGF9 303 aa12.45□□□□□ -0.42
CBX4-204ENST00000495122 CITED1Q99966 193 aa12.45□□□□□ -0.42
CBX4-204ENST00000495122 XKRY2A2RUG3 117 aa12.44□□□□□ -0.42
CBX4-204ENST00000495122 CHEK1O14757 476 aa12.44□□□□□ -0.42
CBX4-204ENST00000495122 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.44□□□□□ -0.42
CBX4-204ENST00000495122 Q8N2B8 174 aa12.44□□□□□ -0.42
CBX4-204ENST00000495122 GLMPQ8WWB7 406 aa12.44□□□□□ -0.42
CBX4-204ENST00000495122 NDFIP1Q9BT67 221 aa12.44□□□□□ -0.42
CBX4-204ENST00000495122 MRPL18Q9H0U6 180 aaKnown RBP12.44□□□□□ -0.42
CBX4-204ENST00000495122 SNURFLB1AK76 121 aa12.43□□□□□ -0.42
CBX4-204ENST00000495122 FOXA3P55318 350 aaPredicted RBP12.43□□□□□ -0.42
CBX4-204ENST00000495122 KRTAP10-3P60369 221 aa12.43□□□□□ -0.42
CBX4-204ENST00000495122 FAM106AQ4KMX7 169 aa12.43□□□□□ -0.42
CBX4-204ENST00000495122 TMEM136Q6ZRR5 245 aa12.43□□□□□ -0.42
CBX4-204ENST00000495122 RBPMS2Q6ZRY4 209 aaKnown RBP12.43□□□□□ -0.42
CBX4-204ENST00000495122 RNF152Q8N8N0 203 aa12.43□□□□□ -0.42
CBX4-204ENST00000495122 NUP35Q8NFH5 326 aa12.43□□□□□ -0.42
CBX4-204ENST00000495122 NEU1Q99519 415 aa12.43□□□□□ -0.42
CBX4-204ENST00000495122 PPP1R14DQ9NXH3 145 aa12.43□□□□□ -0.42
CBX4-204ENST00000495122 PEF1Q9UBV8 284 aaKnown RBP12.43□□□□□ -0.42
CBX4-204ENST00000495122 TRAV8-1A0A0A6YYK1 113 aa12.42□□□□□ -0.42
CBX4-204ENST00000495122 A0A1B0GW15 77 aa12.42□□□□□ -0.42
CBX4-204ENST00000495122 M0R3E3 92 aa12.42□□□□□ -0.42
CBX4-204ENST00000495122 PROK1P58294 105 aa12.42□□□□□ -0.42
CBX4-204ENST00000495122 RPS20P60866 119 aaKnown RBP12.42□□□□□ -0.42
CBX4-204ENST00000495122 DNLZQ5SXM8 178 aa12.42□□□□□ -0.42
CBX4-204ENST00000495122 LCN12Q6JVE5 192 aa12.42□□□□□ -0.42
CBX4-204ENST00000495122 GPHB5Q86YW7 130 aa12.42□□□□□ -0.42
CBX4-204ENST00000495122 LINC01006Q8NI28 216 aa12.42□□□□□ -0.42
CBX4-204ENST00000495122 MYOZ3Q8TDC0 251 aa12.42□□□□□ -0.42
CBX4-204ENST00000495122 RNF114Q9Y508 228 aa12.42□□□□□ -0.42
CBX4-204ENST00000495122 NOTCH1P46531 2555 aa12.41□□□□□ -0.42
CBX4-204ENST00000495122 IGHV3-35A0A0C4DH35 117 aa12.41□□□□□ -0.42
CBX4-204ENST00000495122 HIGD1CA8MV81 97 aa12.41□□□□□ -0.42
CBX4-204ENST00000495122 TGP01266 2768 aa12.41□□□□□ -0.42
CBX4-204ENST00000495122 CBLN1P23435 193 aa12.41□□□□□ -0.42
CBX4-204ENST00000495122 Q6ZS46 218 aa12.41□□□□□ -0.42
CBX4-204ENST00000495122 Q6ZSV7 163 aa12.41□□□□□ -0.42
CBX4-204ENST00000495122 ZC2HC1AQ96GY0 325 aa12.41□□□□□ -0.42
CBX4-204ENST00000495122 SGK494Q96LW2 274 aa12.41□□□□□ -0.42
CBX4-204ENST00000495122 KLK15Q9H2R5 256 aa12.41□□□□□ -0.42
CBX4-204ENST00000495122 UFC1Q9Y3C8 167 aa12.41□□□□□ -0.42
CBX4-204ENST00000495122 PRKDCP78527 4128 aaKnown RBP12.4□□□□□ -0.42
CBX4-204ENST00000495122 A0A1B0GXF2 115 aa12.4□□□□□ -0.42
CBX4-204ENST00000495122 TCL1AP56279 114 aa12.4□□□□□ -0.42
CBX4-204ENST00000495122 Q0VG73 95 aa12.4□□□□□ -0.42
CBX4-204ENST00000495122 C8orf86Q6ZUL3 223 aa12.4□□□□□ -0.42
CBX4-204ENST00000495122 PRR25Q96S07 402 aa12.4□□□□□ -0.42
CBX4-204ENST00000495122 C16orf95Q9H693 158 aa12.4□□□□□ -0.42
CBX4-204ENST00000495122 ZNF702PQ9H963 129 aa12.4□□□□□ -0.42
CBX4-204ENST00000495122 DAZ1Q9NQZ3 744 aaKnown RBP12.4□□□□□ -0.42
CBX4-204ENST00000495122 LENEPQ9Y5L5 61 aa12.4□□□□□ -0.42
CBX4-204ENST00000495122 IGHV7-4-1A0A0J9YVY3 117 aa12.39□□□□□ -0.43
CBX4-204ENST00000495122 CRISP2P16562 243 aa12.39□□□□□ -0.43
CBX4-204ENST00000495122 HBBP68871 147 aa12.39□□□□□ -0.43
CBX4-204ENST00000495122 OR10J3Q5JRS4 329 aa12.39□□□□□ -0.43
CBX4-204ENST00000495122 FAM162BQ5T6X4 162 aa12.39□□□□□ -0.43
CBX4-204ENST00000495122 LINC00322Q6ZN03 302 aaPredicted RBP12.39□□□□□ -0.43
CBX4-204ENST00000495122 OR2D3Q8NGH3 330 aa12.39□□□□□ -0.43
CBX4-204ENST00000495122 C12orf57Q99622 126 aa12.39□□□□□ -0.43
CBX4-204ENST00000495122 CA1P00915 261 aaPredicted RBP12.38□□□□□ -0.43
CBX4-204ENST00000495122 ESDP10768 282 aa12.38□□□□□ -0.43
CBX4-204ENST00000495122 MRPL54Q6P161 138 aaKnown RBP12.38□□□□□ -0.43
CBX4-204ENST00000495122 TMEM18Q96B42 140 aa12.38□□□□□ -0.43
CBX4-204ENST00000495122 UBE2E2Q96LR5 201 aa12.38□□□□□ -0.43
CBX4-204ENST00000495122 PACRGQ96M98 296 aaPredicted RBP12.38□□□□□ -0.43
CBX4-204ENST00000495122 GPR61Q9BZJ8 451 aa12.38□□□□□ -0.43
CBX4-204ENST00000495122 IGHV3OR16-8A0A075B7F1 116 aa12.37□□□□□ -0.43
CBX4-204ENST00000495122 IGKV2-40A0A087WW87 121 aaPredicted RBP12.37□□□□□ -0.43
CBX4-204ENST00000495122 IFITM10A6NMD0 228 aa12.37□□□□□ -0.43
CBX4-204ENST00000495122 M0QZ24 198 aa12.37□□□□□ -0.43
CBX4-204ENST00000495122 IGKV2D-40P01614 121 aaPredicted RBP12.37□□□□□ -0.43
CBX4-204ENST00000495122 TRBV12-3P01733 135 aa12.37□□□□□ -0.43
CBX4-204ENST00000495122 IGHV3-11P01762 117 aa12.37□□□□□ -0.43
CBX4-204ENST00000495122 APCSP02743 223 aa12.37□□□□□ -0.43
CBX4-204ENST00000495122 APOHP02749 345 aaPredicted RBP12.37□□□□□ -0.43
CBX4-204ENST00000495122 LGALS1P09382 135 aaKnown RBP12.37□□□□□ -0.43
CBX4-204ENST00000495122 C9orf47Q6ZRZ4 202 aa12.37□□□□□ -0.43
CBX4-204ENST00000495122 REC114Q7Z4M0 266 aa12.37□□□□□ -0.43
CBX4-204ENST00000495122 TRAV8-2A0A0B4J237 113 aa12.36□□□□□ -0.43
CBX4-204ENST00000495122 A8MWP6 167 aa12.36□□□□□ -0.43
CBX4-204ENST00000495122 LGALS9O00182 355 aa12.36□□□□□ -0.43
CBX4-204ENST00000495122 OVOL1O14753 267 aa12.36□□□□□ -0.43
CBX4-204ENST00000495122 RAB4BP61018 213 aa12.36□□□□□ -0.43
CBX4-204ENST00000495122 DEFA6Q01524 100 aa12.36□□□□□ -0.43
CBX4-204ENST00000495122 RIGQ13278 110 aa12.36□□□□□ -0.43
CBX4-204ENST00000495122 TMEM78Q5T7P6 136 aa12.36□□□□□ -0.43
CBX4-204ENST00000495122 DMRTA1Q5VZB9 504 aa12.36□□□□□ -0.43
CBX4-204ENST00000495122 UNQ9165/PRO28630Q6UXU0 137 aa12.36□□□□□ -0.43
CBX4-204ENST00000495122 GATD1Q8NB37 220 aa12.36□□□□□ -0.43
CBX4-204ENST00000495122 BORCS7Q96B45 105 aa12.36□□□□□ -0.43
CBX4-204ENST00000495122 C16orf92Q96LL3 132 aa12.36□□□□□ -0.43
CBX4-204ENST00000495122 HIST1H2BLQ99880 126 aa12.36□□□□□ -0.43
CBX4-204ENST00000495122 NRN1Q9NPD7 142 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms