RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 DEFB130AP0DP74 79 aa12.76□□□□□ -0.37
COL20A1-207ENST00000494913 LEPP41159 167 aa12.76□□□□□ -0.37
COL20A1-207ENST00000494913 UBE2L3P68036 154 aaKnown RBP12.76□□□□□ -0.37
COL20A1-207ENST00000494913 ERCC8Q13216 396 aa12.76□□□□□ -0.37
COL20A1-207ENST00000494913 ICAM4Q14773 271 aa12.76□□□□□ -0.37
COL20A1-207ENST00000494913 GFI1BQ5VTD9 330 aa12.76□□□□□ -0.37
COL20A1-207ENST00000494913 RNF141Q8WVD5 230 aa12.76□□□□□ -0.37
COL20A1-207ENST00000494913 C20orf144Q9BQM9 153 aa12.76□□□□□ -0.37
COL20A1-207ENST00000494913 ZNF345Q14585 488 aa12.75□□□□□ -0.37
COL20A1-207ENST00000494913 RPL7L1Q6DKI1 246 aaKnown RBP12.75□□□□□ -0.37
COL20A1-207ENST00000494913 FAM122CQ6P4D5 195 aa12.75□□□□□ -0.37
COL20A1-207ENST00000494913 PQLC2Q6ZP29 291 aa12.75□□□□□ -0.37
COL20A1-207ENST00000494913 FXYD5Q96DB9 178 aa12.75□□□□□ -0.37
COL20A1-207ENST00000494913 C16orf74Q96GX8 76 aa12.75□□□□□ -0.37
COL20A1-207ENST00000494913 ST6GAL2Q96JF0 529 aa12.75□□□□□ -0.37
COL20A1-207ENST00000494913 FAM210BQ96KR6 192 aa12.75□□□□□ -0.37
COL20A1-207ENST00000494913 ODF3Q96PU9 254 aa12.75□□□□□ -0.37
COL20A1-207ENST00000494913 TRAV12-3A0A0B4J271 114 aa12.74□□□□□ -0.37
COL20A1-207ENST00000494913 HMSDA8MTL9 139 aa12.74□□□□□ -0.37
COL20A1-207ENST00000494913 RAB2AP61019 212 aa12.74□□□□□ -0.37
COL20A1-207ENST00000494913 ZNF493Q6ZR52 646 aa12.74□□□□□ -0.37
COL20A1-207ENST00000494913 BIRC6Q9NR09 4857 aa12.74□□□□□ -0.37
COL20A1-207ENST00000494913 A0A0D9SG52 128 aa12.73□□□□□ -0.37
COL20A1-207ENST00000494913 P0DMU3 169 aa12.73□□□□□ -0.37
COL20A1-207ENST00000494913 FAM231AP0DMU4 169 aa12.73□□□□□ -0.37
COL20A1-207ENST00000494913 FAM231CP0DMU5 169 aa12.73□□□□□ -0.37
COL20A1-207ENST00000494913 CDC34P49427 236 aaPredicted RBP12.73□□□□□ -0.37
COL20A1-207ENST00000494913 LINC00477Q96M19 166 aa12.73□□□□□ -0.37
COL20A1-207ENST00000494913 ARPC5LQ9BPX5 153 aa12.73□□□□□ -0.37
COL20A1-207ENST00000494913 AGPAT4-IT1Q9H0P7 198 aa12.73□□□□□ -0.37
COL20A1-207ENST00000494913 TIMM8BQ9Y5J9 83 aaPredicted RBP12.73□□□□□ -0.37
COL20A1-207ENST00000494913 KANTRA0A1W2PQU2 76 aa12.72□□□□□ -0.37
COL20A1-207ENST00000494913 CSN1S1P47710 185 aa12.72□□□□□ -0.37
COL20A1-207ENST00000494913 FAM74A1Q5RGS3 127 aa12.72□□□□□ -0.37
COL20A1-207ENST00000494913 CCDC28AQ8IWP9 274 aa12.72□□□□□ -0.37
COL20A1-207ENST00000494913 TCTE3Q8IZS6 198 aa12.72□□□□□ -0.37
COL20A1-207ENST00000494913 LYPD1Q8N2G4 141 aa12.72□□□□□ -0.37
COL20A1-207ENST00000494913 RNASE8Q8TDE3 154 aaKnown RBP12.72□□□□□ -0.37
COL20A1-207ENST00000494913 TMEM263Q8WUH6 116 aaKnown RBP12.72□□□□□ -0.37
COL20A1-207ENST00000494913 ZNF503Q96F45 646 aa12.72□□□□□ -0.37
COL20A1-207ENST00000494913 IGKV2-40A0A087WW87 121 aaPredicted RBP12.72□□□□□ -0.37
COL20A1-207ENST00000494913 IGKV2D-40P01614 121 aaPredicted RBP12.72□□□□□ -0.37
COL20A1-207ENST00000494913 TMEM88Q6PEY1 159 aa12.72□□□□□ -0.37
COL20A1-207ENST00000494913 KCNRGQ8N5I3 272 aa12.72□□□□□ -0.37
COL20A1-207ENST00000494913 PHYHIPLQ96FC7 376 aa12.72□□□□□ -0.37
COL20A1-207ENST00000494913 VGLL1Q99990 258 aa12.72□□□□□ -0.37
COL20A1-207ENST00000494913 ACTR3CQ9C0K3 210 aaPredicted RBP12.72□□□□□ -0.37
COL20A1-207ENST00000494913 SH3BGRL3Q9H299 93 aa12.72□□□□□ -0.37
COL20A1-207ENST00000494913 NOP10Q9NPE3 64 aaKnown RBP12.72□□□□□ -0.37
COL20A1-207ENST00000494913 PFDN1O60925 122 aa12.71□□□□□ -0.38
COL20A1-207ENST00000494913 EIF3GO75821 320 aaKnown RBP eCLIP12.71□□□□□ -0.38
COL20A1-207ENST00000494913 SLC25A5P05141 298 aaKnown RBP12.71□□□□□ -0.38
COL20A1-207ENST00000494913 RANP62826 216 aaKnown RBP12.71□□□□□ -0.38
COL20A1-207ENST00000494913 EIF5AP63241 154 aaKnown RBP12.71□□□□□ -0.38
COL20A1-207ENST00000494913 AKR1C8PQ5T2L2 129 aa12.71□□□□□ -0.38
COL20A1-207ENST00000494913 C9orf47Q6ZRZ4 202 aa12.71□□□□□ -0.38
COL20A1-207ENST00000494913 AKAP14Q86UN6 197 aa12.71□□□□□ -0.38
COL20A1-207ENST00000494913 POM121L12Q8N7R1 296 aa12.71□□□□□ -0.38
COL20A1-207ENST00000494913 FRAS1Q86XX4 4008 aa12.7□□□□□ -0.38
COL20A1-207ENST00000494913 RNASE4P34096 147 aaKnown RBP12.7□□□□□ -0.38
COL20A1-207ENST00000494913 TMEM78Q5T7P6 136 aa12.7□□□□□ -0.38
COL20A1-207ENST00000494913 FAM19A4Q96LR4 140 aa12.7□□□□□ -0.38
COL20A1-207ENST00000494913 DNAH10Q8IVF4 4471 aa12.69□□□□□ -0.38
COL20A1-207ENST00000494913 C7orf71A4D174 169 aa12.69□□□□□ -0.38
COL20A1-207ENST00000494913 CBY3A6NI87 242 aa12.69□□□□□ -0.38
COL20A1-207ENST00000494913 F5H768 121 aa12.69□□□□□ -0.38
COL20A1-207ENST00000494913 CD300CQ08708 224 aa12.69□□□□□ -0.38
COL20A1-207ENST00000494913 OR11H4Q8NGC9 324 aa12.69□□□□□ -0.38
COL20A1-207ENST00000494913 RAB24Q969Q5 203 aa12.69□□□□□ -0.38
COL20A1-207ENST00000494913 PYGO2Q9BRQ0 406 aa12.69□□□□□ -0.38
COL20A1-207ENST00000494913 KLLNB2CW77 178 aa12.68□□□□□ -0.38
COL20A1-207ENST00000494913 HMGB3O15347 200 aaKnown RBP12.68□□□□□ -0.38
COL20A1-207ENST00000494913 CXorf1O96002 111 aa12.68□□□□□ -0.38
COL20A1-207ENST00000494913 ATP5G1P05496 136 aa12.68□□□□□ -0.38
COL20A1-207ENST00000494913 GPX1P07203 203 aa12.68□□□□□ -0.38
COL20A1-207ENST00000494913 ATP5G3P48201 142 aa12.68□□□□□ -0.38
COL20A1-207ENST00000494913 BTN1A1Q13410 526 aa12.68□□□□□ -0.38
COL20A1-207ENST00000494913 CMTM2Q8TAZ6 248 aa12.68□□□□□ -0.38
COL20A1-207ENST00000494913 RXFP4Q8TDU9 374 aa12.68□□□□□ -0.38
COL20A1-207ENST00000494913 ZNF471Q9BX82 626 aaPredicted RBP12.68□□□□□ -0.38
COL20A1-207ENST00000494913 Q9H3A6 140 aa12.68□□□□□ -0.38
COL20A1-207ENST00000494913 DNAH6Q9C0G6 4158 aa12.67□□□□□ -0.38
COL20A1-207ENST00000494913 BCL2L11O43521 198 aa12.67□□□□□ -0.38
COL20A1-207ENST00000494913 ZNF324O75467 553 aaPredicted RBP12.67□□□□□ -0.38
COL20A1-207ENST00000494913 STAG3L2P0CL84 134 aa12.67□□□□□ -0.38
COL20A1-207ENST00000494913 STAG3L3P0CL85 134 aa12.67□□□□□ -0.38
COL20A1-207ENST00000494913 ARL14EPLP0DKL9 152 aa12.67□□□□□ -0.38
COL20A1-207ENST00000494913 UBE2DNLQ8IWF7 75 aa12.67□□□□□ -0.38
COL20A1-207ENST00000494913 ZNF492Q9P255 531 aa12.67□□□□□ -0.38
COL20A1-207ENST00000494913 SNURFLB1AK76 121 aa12.66□□□□□ -0.38
COL20A1-207ENST00000494913 CRISP2P16562 243 aa12.66□□□□□ -0.38
COL20A1-207ENST00000494913 IQCF2Q8IXL9 164 aa12.66□□□□□ -0.38
COL20A1-207ENST00000494913 OTORQ9NRC9 128 aa12.66□□□□□ -0.38
COL20A1-207ENST00000494913 CYTL1Q9NRR1 136 aa12.66□□□□□ -0.38
COL20A1-207ENST00000494913 TMEM167BQ9NRX6 74 aa12.66□□□□□ -0.38
COL20A1-207ENST00000494913 CTXND1A0A1B0GTU2 59 aa12.65□□□□□ -0.38
COL20A1-207ENST00000494913 C1QBP02746 253 aa12.65□□□□□ -0.38
COL20A1-207ENST00000494913 NMBP08949 121 aa12.65□□□□□ -0.38
COL20A1-207ENST00000494913 ZNF138P52744 262 aa12.65□□□□□ -0.38
COL20A1-207ENST00000494913 ZFAND2AQ8N6M9 145 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms