RNA–Protein interactions for RNA: ENST00000494411.5

PCMT1-209, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, human

TSL 4

Gene PCMT1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCMT1-209	ENST00000494411	PLAC8L1	A1L4L8	177 aa		13.59	□□□□□ -0.23
PCMT1-209	ENST00000494411		H7BYZ3	331 aa		13.59	□□□□□ -0.23
PCMT1-209	ENST00000494411	LINC00477	Q96M19	166 aa		13.59	□□□□□ -0.23
PCMT1-209	ENST00000494411	SH3BGRL3	Q9H299	93 aa		13.59	□□□□□ -0.23
PCMT1-209	ENST00000494411		Q9H3A6	140 aa		13.59	□□□□□ -0.23
PCMT1-209	ENST00000494411	TRAV12-3	A0A0B4J271	114 aa		13.58	□□□□□ -0.24
PCMT1-209	ENST00000494411	HMGB3	O15347	200 aa	Known RBP	13.58	□□□□□ -0.24
PCMT1-209	ENST00000494411	RPL7L1	Q6DKI1	246 aa	Known RBP	13.58	□□□□□ -0.24
PCMT1-209	ENST00000494411	C9orf47	Q6ZRZ4	202 aa		13.58	□□□□□ -0.24
PCMT1-209	ENST00000494411	LYPD1	Q8N2G4	141 aa		13.58	□□□□□ -0.24
PCMT1-209	ENST00000494411	FAM19A4	Q96LR4	140 aa		13.58	□□□□□ -0.24
PCMT1-209	ENST00000494411	VGLL1	Q99990	258 aa		13.58	□□□□□ -0.24
PCMT1-209	ENST00000494411	SMLR1	H3BR10	107 aa		13.57	□□□□□ -0.24
PCMT1-209	ENST00000494411	CDC34	P49427	236 aa	Predicted RBP	13.57	□□□□□ -0.24
PCMT1-209	ENST00000494411	DAD1	P61803	113 aa		13.57	□□□□□ -0.24
PCMT1-209	ENST00000494411	TMEM78	Q5T7P6	136 aa		13.57	□□□□□ -0.24
PCMT1-209	ENST00000494411	LGALS9C	Q6DKI2	356 aa		13.57	□□□□□ -0.24
PCMT1-209	ENST00000494411	PQLC2	Q6ZP29	291 aa		13.57	□□□□□ -0.24
PCMT1-209	ENST00000494411	C16orf74	Q96GX8	76 aa		13.57	□□□□□ -0.24
PCMT1-209	ENST00000494411	C7orf71	A4D174	169 aa		13.56	□□□□□ -0.24
PCMT1-209	ENST00000494411	LYRM9	A8MSI8	78 aa		13.56	□□□□□ -0.24
PCMT1-209	ENST00000494411	KLLN	B2CW77	178 aa		13.56	□□□□□ -0.24
PCMT1-209	ENST00000494411	ARPC5	O15511	151 aa		13.56	□□□□□ -0.24
PCMT1-209	ENST00000494411	SLC25A5	P05141	298 aa	Known RBP	13.56	□□□□□ -0.24
PCMT1-209	ENST00000494411	HTN3	P15516	51 aa		13.56	□□□□□ -0.24
PCMT1-209	ENST00000494411	CSN1S1	P47710	185 aa		13.56	□□□□□ -0.24
PCMT1-209	ENST00000494411	RNASE8	Q8TDE3	154 aa	Known RBP	13.56	□□□□□ -0.24
PCMT1-209	ENST00000494411	TMEM263	Q8WUH6	116 aa	Known RBP	13.56	□□□□□ -0.24
PCMT1-209	ENST00000494411	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.55	□□□□□ -0.24
PCMT1-209	ENST00000494411	ARL14EPL	P0DKL9	152 aa		13.55	□□□□□ -0.24
PCMT1-209	ENST00000494411	CRISP2	P16562	243 aa		13.55	□□□□□ -0.24
PCMT1-209	ENST00000494411	SERF2	P84101	59 aa		13.55	□□□□□ -0.24
PCMT1-209	ENST00000494411	BTN1A1	Q13410	526 aa		13.55	□□□□□ -0.24
PCMT1-209	ENST00000494411	ZNF493	Q6ZR52	646 aa		13.55	□□□□□ -0.24
PCMT1-209	ENST00000494411		Q8TAT8	98 aa		13.55	□□□□□ -0.24
PCMT1-209	ENST00000494411	MB	P02144	154 aa		13.54	□□□□□ -0.24
PCMT1-209	ENST00000494411	DEFB130B	P0DP73	79 aa		13.54	□□□□□ -0.24
PCMT1-209	ENST00000494411	DEFB130A	P0DP74	79 aa		13.54	□□□□□ -0.24
PCMT1-209	ENST00000494411	CD300C	Q08708	224 aa		13.54	□□□□□ -0.24
PCMT1-209	ENST00000494411	CCDC28A	Q8IWP9	274 aa		13.54	□□□□□ -0.24
PCMT1-209	ENST00000494411	RAB24	Q969Q5	203 aa		13.54	□□□□□ -0.24
PCMT1-209	ENST00000494411	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.54	□□□□□ -0.24
PCMT1-209	ENST00000494411	HYLS1	Q96M11	299 aa		13.54	□□□□□ -0.24
PCMT1-209	ENST00000494411	OTOR	Q9NRC9	128 aa		13.54	□□□□□ -0.24
PCMT1-209	ENST00000494411	ZNF492	Q9P255	531 aa		13.54	□□□□□ -0.24
PCMT1-209	ENST00000494411	BIRC6	Q9NR09	4857 aa		13.53	□□□□□ -0.24
PCMT1-209	ENST00000494411	EPPK1	P58107	5090 aa	Known RBP	13.53	□□□□□ -0.24
PCMT1-209	ENST00000494411	GPX1	P07203	203 aa		13.53	□□□□□ -0.24
PCMT1-209	ENST00000494411	STAG3L2	P0CL84	134 aa		13.53	□□□□□ -0.24
PCMT1-209	ENST00000494411	STAG3L3	P0CL85	134 aa		13.53	□□□□□ -0.24
PCMT1-209	ENST00000494411	RNASE4	P34096	147 aa	Known RBP	13.53	□□□□□ -0.24
PCMT1-209	ENST00000494411	ZNF138	P52744	262 aa		13.53	□□□□□ -0.24
PCMT1-209	ENST00000494411	PRR9	Q5T870	116 aa		13.53	□□□□□ -0.24
PCMT1-209	ENST00000494411	ZFAND2A	Q8N6M9	145 aa		13.53	□□□□□ -0.24
PCMT1-209	ENST00000494411	RXFP4	Q8TDU9	374 aa		13.53	□□□□□ -0.24
PCMT1-209	ENST00000494411	PYGO2	Q9BRQ0	406 aa		13.53	□□□□□ -0.24
PCMT1-209	ENST00000494411	NDUFAF3	Q9BU61	184 aa		13.53	□□□□□ -0.24
PCMT1-209	ENST00000494411	NOP10	Q9NPE3	64 aa	Known RBP	13.53	□□□□□ -0.24
PCMT1-209	ENST00000494411	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.53	□□□□□ -0.24
PCMT1-209	ENST00000494411	RBAKDN	A6NC62	111 aa		13.52	□□□□□ -0.25
PCMT1-209	ENST00000494411	DIRC3	C9JPN6	131 aa		13.52	□□□□□ -0.25
PCMT1-209	ENST00000494411	NMB	P08949	121 aa		13.52	□□□□□ -0.25
PCMT1-209	ENST00000494411	RPH3AL	Q9UNE2	315 aa		13.52	□□□□□ -0.25
PCMT1-209	ENST00000494411	DNAH10	Q8IVF4	4471 aa		13.51	□□□□□ -0.25
PCMT1-209	ENST00000494411	PGP	A6NDG6	321 aa		13.51	□□□□□ -0.25
PCMT1-209	ENST00000494411	ZNF324	O75467	553 aa	Predicted RBP	13.51	□□□□□ -0.25
PCMT1-209	ENST00000494411	FAM74A1	Q5RGS3	127 aa		13.51	□□□□□ -0.25
PCMT1-209	ENST00000494411	SSX7	Q7RTT5	188 aa		13.51	□□□□□ -0.25
PCMT1-209	ENST00000494411	CMTM2	Q8TAZ6	248 aa		13.51	□□□□□ -0.25
PCMT1-209	ENST00000494411	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.51	□□□□□ -0.25
PCMT1-209	ENST00000494411	TAAR5	O14804	337 aa		13.5	□□□□□ -0.25
PCMT1-209	ENST00000494411	GCHFR	P30047	84 aa		13.5	□□□□□ -0.25
PCMT1-209	ENST00000494411	CYTL1	Q9NRR1	136 aa		13.5	□□□□□ -0.25
PCMT1-209	ENST00000494411	TRBV7-9	A0A0J9YWB2	115 aa		13.49	□□□□□ -0.25
PCMT1-209	ENST00000494411		Q6ZQT7	251 aa		13.49	□□□□□ -0.25
PCMT1-209	ENST00000494411	FAM210B	Q96KR6	192 aa		13.49	□□□□□ -0.25
PCMT1-209	ENST00000494411	SNURFL	B1AK76	121 aa		13.48	□□□□□ -0.25
PCMT1-209	ENST00000494411	GNG5	P63218	68 aa		13.48	□□□□□ -0.25
PCMT1-209	ENST00000494411	ZNF726P1	Q15940	193 aa		13.48	□□□□□ -0.25
PCMT1-209	ENST00000494411	TMEM88	Q6PEY1	159 aa		13.48	□□□□□ -0.25
PCMT1-209	ENST00000494411	GOLT1A	Q6ZVE7	132 aa		13.48	□□□□□ -0.25
PCMT1-209	ENST00000494411	OR11H4	Q8NGC9	324 aa		13.48	□□□□□ -0.25
PCMT1-209	ENST00000494411	SUN5	Q8TC36	379 aa		13.48	□□□□□ -0.25
PCMT1-209	ENST00000494411	LINC00467	Q9BRT7	94 aa		13.48	□□□□□ -0.25
PCMT1-209	ENST00000494411	CBY3	A6NI87	242 aa		13.47	□□□□□ -0.25
PCMT1-209	ENST00000494411	CXorf1	O96002	111 aa		13.47	□□□□□ -0.25
PCMT1-209	ENST00000494411	ZNF345	Q14585	488 aa		13.47	□□□□□ -0.25
PCMT1-209	ENST00000494411	KCNRG	Q8N5I3	272 aa		13.47	□□□□□ -0.25
PCMT1-209	ENST00000494411	EIF4E3	Q8N5X7	224 aa	Known RBP	13.47	□□□□□ -0.25
PCMT1-209	ENST00000494411	TMEM167B	Q9NRX6	74 aa		13.47	□□□□□ -0.25
PCMT1-209	ENST00000494411	FRAS1	Q86XX4	4008 aa		13.47	□□□□□ -0.25
PCMT1-209	ENST00000494411	RGS13	O14921	159 aa		13.46	□□□□□ -0.25
PCMT1-209	ENST00000494411	ATP5G1	P05496	136 aa		13.46	□□□□□ -0.25
PCMT1-209	ENST00000494411	ATP5G3	P48201	142 aa		13.46	□□□□□ -0.25
PCMT1-209	ENST00000494411	IQCF2	Q8IXL9	164 aa		13.46	□□□□□ -0.25
PCMT1-209	ENST00000494411	ARL6IP6	Q8N6S5	226 aa		13.46	□□□□□ -0.25
PCMT1-209	ENST00000494411	LINC00612	Q8N6U2	182 aa		13.46	□□□□□ -0.25
PCMT1-209	ENST00000494411	C11orf72	Q8NBR9	251 aa		13.46	□□□□□ -0.25
PCMT1-209	ENST00000494411	ZNF680	Q8NEM1	530 aa		13.46	□□□□□ -0.25
PCMT1-209	ENST00000494411	TMED6	Q8WW62	240 aa		13.46	□□□□□ -0.25

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