RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 HSD17B11Q8NBQ5 300 aa15.6■□□□□ 0.09
HPS3-207ENST00000494327 AGPAT4-IT1Q9H0P7 198 aa15.6■□□□□ 0.09
HPS3-207ENST00000494327 IGKV2-40A0A087WW87 121 aaPredicted RBP15.59■□□□□ 0.09
HPS3-207ENST00000494327 TRAV12-3A0A0B4J271 114 aa15.59■□□□□ 0.09
HPS3-207ENST00000494327 A0A0D9SG52 128 aa15.59■□□□□ 0.09
HPS3-207ENST00000494327 H7BYZ3 331 aa15.59■□□□□ 0.09
HPS3-207ENST00000494327 IGKV2D-40P01614 121 aaPredicted RBP15.59■□□□□ 0.09
HPS3-207ENST00000494327 M6PRP20645 277 aa15.59■□□□□ 0.09
HPS3-207ENST00000494327 RAB2AP61019 212 aa15.59■□□□□ 0.09
HPS3-207ENST00000494327 LINC00477Q96M19 166 aa15.59■□□□□ 0.09
HPS3-207ENST00000494327 ODF3Q96PU9 254 aa15.59■□□□□ 0.09
HPS3-207ENST00000494327 C20orf144Q9BQM9 153 aa15.59■□□□□ 0.09
HPS3-207ENST00000494327 DEFB130BP0DP73 79 aa15.58■□□□□ 0.08
HPS3-207ENST00000494327 DEFB130AP0DP74 79 aa15.58■□□□□ 0.08
HPS3-207ENST00000494327 ZNF345Q14585 488 aa15.58■□□□□ 0.08
HPS3-207ENST00000494327 OR10G4Q8NGN3 311 aa15.58■□□□□ 0.08
HPS3-207ENST00000494327 OR10G9Q8NGN4 311 aa15.58■□□□□ 0.08
HPS3-207ENST00000494327 OR10G7Q8NGN6 311 aa15.58■□□□□ 0.08
HPS3-207ENST00000494327 PLAC8L1A1L4L8 177 aa15.57■□□□□ 0.08
HPS3-207ENST00000494327 LYRM9A8MSI8 78 aa15.57■□□□□ 0.08
HPS3-207ENST00000494327 KCNRGQ8N5I3 272 aa15.57■□□□□ 0.08
HPS3-207ENST00000494327 C16orf74Q96GX8 76 aa15.57■□□□□ 0.08
HPS3-207ENST00000494327 NDUFAF3Q9BU61 184 aa15.57■□□□□ 0.08
HPS3-207ENST00000494327 Q9H3A6 140 aa15.57■□□□□ 0.08
HPS3-207ENST00000494327 HMGB3O15347 200 aaKnown RBP15.56■□□□□ 0.08
HPS3-207ENST00000494327 CSN1S1P47710 185 aa15.56■□□□□ 0.08
HPS3-207ENST00000494327 LGALSLQ3ZCW2 172 aaPredicted RBP15.56■□□□□ 0.08
HPS3-207ENST00000494327 TMEM78Q5T7P6 136 aa15.56■□□□□ 0.08
HPS3-207ENST00000494327 CCDC28AQ8IWP9 274 aa15.56■□□□□ 0.08
HPS3-207ENST00000494327 VGLL1Q99990 258 aa15.56■□□□□ 0.08
HPS3-207ENST00000494327 DNAH1Q9P2D7 4330 aa15.56■□□□□ 0.08
HPS3-207ENST00000494327 SLC25A5P05141 298 aaKnown RBP15.55■□□□□ 0.08
HPS3-207ENST00000494327 ATP6V0CP27449 155 aa15.55■□□□□ 0.08
HPS3-207ENST00000494327 NKX2-5P52952 324 aaPredicted RBP15.55■□□□□ 0.08
HPS3-207ENST00000494327 C9orf47Q6ZRZ4 202 aa15.55■□□□□ 0.08
HPS3-207ENST00000494327 LYPD1Q8N2G4 141 aa15.55■□□□□ 0.08
HPS3-207ENST00000494327 TAAR5O14804 337 aa15.54■□□□□ 0.08
HPS3-207ENST00000494327 RNASE4P34096 147 aaKnown RBP15.54■□□□□ 0.08
HPS3-207ENST00000494327 ZNF493Q6ZR52 646 aa15.54■□□□□ 0.08
HPS3-207ENST00000494327 TMUB2Q71RG4 321 aa15.54■□□□□ 0.08
HPS3-207ENST00000494327 TMEM263Q8WUH6 116 aaKnown RBP15.54■□□□□ 0.08
HPS3-207ENST00000494327 NOP10Q9NPE3 64 aaKnown RBP15.54■□□□□ 0.08
HPS3-207ENST00000494327 TIMM8BQ9Y5J9 83 aaPredicted RBP15.54■□□□□ 0.08
HPS3-207ENST00000494327 C7orf71A4D174 169 aa15.53■□□□□ 0.08
HPS3-207ENST00000494327 GPX1P07203 203 aa15.53■□□□□ 0.08
HPS3-207ENST00000494327 BTN1A1Q13410 526 aa15.53■□□□□ 0.08
HPS3-207ENST00000494327 PQLC2Q6ZP29 291 aa15.53■□□□□ 0.08
HPS3-207ENST00000494327 C9orf62Q8N4C0 152 aa15.53■□□□□ 0.08
HPS3-207ENST00000494327 RNASE8Q8TDE3 154 aaKnown RBP15.53■□□□□ 0.08
HPS3-207ENST00000494327 FAM19A4Q96LR4 140 aa15.53■□□□□ 0.08
HPS3-207ENST00000494327 KANTRA0A1W2PQU2 76 aa15.52■□□□□ 0.08
HPS3-207ENST00000494327 PGPA6NDG6 321 aa15.52■□□□□ 0.08
HPS3-207ENST00000494327 CDC34P49427 236 aaPredicted RBP15.52■□□□□ 0.08
HPS3-207ENST00000494327 RPL7L1Q6DKI1 246 aaKnown RBP15.52■□□□□ 0.08
HPS3-207ENST00000494327 OR2G3Q8NGZ4 309 aa15.52■□□□□ 0.08
HPS3-207ENST00000494327 ARPC5LQ9BPX5 153 aa15.52■□□□□ 0.08
HPS3-207ENST00000494327 PSMG3Q9BT73 122 aaPredicted RBP15.52■□□□□ 0.08
HPS3-207ENST00000494327 SH3BGRL3Q9H299 93 aa15.52■□□□□ 0.08
HPS3-207ENST00000494327 ZNF492Q9P255 531 aa15.52■□□□□ 0.08
HPS3-207ENST00000494327 BORCS7-ASMTA0A0B4J1R7 106 aa15.51■□□□□ 0.07
HPS3-207ENST00000494327 KLLNB2CW77 178 aa15.51■□□□□ 0.07
HPS3-207ENST00000494327 ZNF138P52744 262 aa15.51■□□□□ 0.07
HPS3-207ENST00000494327 Q8TAT8 98 aa15.51■□□□□ 0.07
HPS3-207ENST00000494327 PYGO2Q9BRQ0 406 aa15.51■□□□□ 0.07
HPS3-207ENST00000494327 RPH3ALQ9UNE2 315 aa15.51■□□□□ 0.07
HPS3-207ENST00000494327 BCL2L11O43521 198 aa15.5■□□□□ 0.07
HPS3-207ENST00000494327 SERF2P84101 59 aa15.5■□□□□ 0.07
HPS3-207ENST00000494327 RXFP4Q8TDU9 374 aa15.5■□□□□ 0.07
HPS3-207ENST00000494327 FAM210BQ96KR6 192 aa15.5■□□□□ 0.07
HPS3-207ENST00000494327 OTORQ9NRC9 128 aa15.5■□□□□ 0.07
HPS3-207ENST00000494327 SNURFLB1AK76 121 aa15.49■□□□□ 0.07
HPS3-207ENST00000494327 DIRC3C9JPN6 131 aa15.49■□□□□ 0.07
HPS3-207ENST00000494327 ZNF324O75467 553 aaPredicted RBP15.49■□□□□ 0.07
HPS3-207ENST00000494327 MBP02144 154 aa15.49■□□□□ 0.07
HPS3-207ENST00000494327 ARL14EPLP0DKL9 152 aa15.49■□□□□ 0.07
HPS3-207ENST00000494327 CRISP2P16562 243 aa15.49■□□□□ 0.07
HPS3-207ENST00000494327 FAM74A1Q5RGS3 127 aa15.49■□□□□ 0.07
HPS3-207ENST00000494327 TMEM88Q6PEY1 159 aa15.49■□□□□ 0.07
HPS3-207ENST00000494327 ZFAND2AQ8N6M9 145 aa15.49■□□□□ 0.07
HPS3-207ENST00000494327 CMTM2Q8TAZ6 248 aa15.49■□□□□ 0.07
HPS3-207ENST00000494327 RAB24Q969Q5 203 aa15.49■□□□□ 0.07
HPS3-207ENST00000494327 CBY3A6NI87 242 aa15.48■□□□□ 0.07
HPS3-207ENST00000494327 F5H768 121 aa15.48■□□□□ 0.07
HPS3-207ENST00000494327 NMBP08949 121 aa15.48■□□□□ 0.07
HPS3-207ENST00000494327 PRR9Q5T870 116 aa15.48■□□□□ 0.07
HPS3-207ENST00000494327 GNPNAT1Q96EK6 184 aaPredicted RBP15.48■□□□□ 0.07
HPS3-207ENST00000494327 RBAKDNA6NC62 111 aa15.47■□□□□ 0.07
HPS3-207ENST00000494327 ATP5G1P05496 136 aa15.47■□□□□ 0.07
HPS3-207ENST00000494327 STAG3L2P0CL84 134 aa15.47■□□□□ 0.07
HPS3-207ENST00000494327 STAG3L3P0CL85 134 aa15.47■□□□□ 0.07
HPS3-207ENST00000494327 P0DMU3 169 aa15.47■□□□□ 0.07
HPS3-207ENST00000494327 FAM231AP0DMU4 169 aa15.47■□□□□ 0.07
HPS3-207ENST00000494327 FAM231CP0DMU5 169 aa15.47■□□□□ 0.07
HPS3-207ENST00000494327 ATP5G3P48201 142 aa15.47■□□□□ 0.07
HPS3-207ENST00000494327 ZNF471Q9BX82 626 aaPredicted RBP15.47■□□□□ 0.07
HPS3-207ENST00000494327 ACTR3CQ9C0K3 210 aaPredicted RBP15.47■□□□□ 0.07
HPS3-207ENST00000494327 CYTL1Q9NRR1 136 aa15.47■□□□□ 0.07
HPS3-207ENST00000494327 RGS13O14921 159 aa15.46■□□□□ 0.07
HPS3-207ENST00000494327 EIF5AP63241 154 aaKnown RBP15.46■□□□□ 0.07
HPS3-207ENST00000494327 Q6ZQT7 251 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms