RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 UNQ5815/PRO19632Q6UWF5 114 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 LINC00305Q7Z4B0 112 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 ITLN1Q8WWA0 313 aa8.31□□□□□ -1.08
PDLIM1-205ENST00000493949 TRAV40A0A0B4J280 105 aa8.3□□□□□ -1.08
PDLIM1-205ENST00000493949 IGHV3-64DA0A0J9YX35 117 aa8.3□□□□□ -1.08
PDLIM1-205ENST00000493949 A6NDN8 102 aa8.3□□□□□ -1.08
PDLIM1-205ENST00000493949 IGHV1-46P01743 117 aa8.3□□□□□ -1.08
PDLIM1-205ENST00000493949 COX8AP10176 69 aa8.3□□□□□ -1.08
PDLIM1-205ENST00000493949 GP9P14770 177 aa8.3□□□□□ -1.08
PDLIM1-205ENST00000493949 TNFAIP6P98066 277 aaPredicted RBP8.3□□□□□ -1.08
PDLIM1-205ENST00000493949 TMEM155Q4W5P6 130 aa8.3□□□□□ -1.08
PDLIM1-205ENST00000493949 PATE2Q6UY27 113 aa8.3□□□□□ -1.08
PDLIM1-205ENST00000493949 GTF2H5Q6ZYL4 71 aa8.3□□□□□ -1.08
PDLIM1-205ENST00000493949 Q86TA4 180 aa8.3□□□□□ -1.08
PDLIM1-205ENST00000493949 TMEM75Q8N9X5 138 aa8.3□□□□□ -1.08
PDLIM1-205ENST00000493949 OR9G4Q8NGQ1 327 aa8.3□□□□□ -1.08
PDLIM1-205ENST00000493949 OR2T6Q8NHC8 308 aa8.3□□□□□ -1.08
PDLIM1-205ENST00000493949 C8orf46Q8TAG6 207 aa8.3□□□□□ -1.08
PDLIM1-205ENST00000493949 TRAV34A0A0B4J273 112 aa8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 A0A1B0GUT8 65 aa8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 TAX1BP3O14907 124 aa8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 IGKV1-16P04430 117 aa8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 CT45A10P0DMU9 189 aa8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 LCN12Q6JVE5 192 aa8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 BRD3OSQ6XYD6 125 aa8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 Q6ZSV7 163 aa8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 TCF24Q7RTU0 167 aa8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 OR10AG1Q8NH19 301 aa8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 PIFOQ8TCI5 191 aa8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 RNASE8Q8TDE3 154 aaKnown RBP8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 NPIPB3Q92617 1050 aa8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 URB1-AS1Q96HZ7 61 aa8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 RNF5Q99942 180 aa8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 SSBP3Q9BWW4 388 aaPredicted RBP8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 MRPL20Q9BYC9 149 aaKnown RBP8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 AP5S1Q9NUS5 200 aa8.29□□□□□ -1.08
PDLIM1-205ENST00000493949 IGHV3OR15-7A0A075B7D8 119 aa8.28□□□□□ -1.08
PDLIM1-205ENST00000493949 PGPA6NDG6 321 aa8.28□□□□□ -1.08
PDLIM1-205ENST00000493949 C3orf84H3BNL1 204 aa8.28□□□□□ -1.08
PDLIM1-205ENST00000493949 K7EIL1 84 aa8.28□□□□□ -1.08
PDLIM1-205ENST00000493949 CA1P00915 261 aaPredicted RBP8.28□□□□□ -1.08
PDLIM1-205ENST00000493949 TFF1P04155 84 aa8.28□□□□□ -1.08
PDLIM1-205ENST00000493949 PYYP10082 97 aa8.28□□□□□ -1.08
PDLIM1-205ENST00000493949 GATA2P23769 480 aaPredicted RBP8.28□□□□□ -1.08
PDLIM1-205ENST00000493949 S100A7P31151 101 aa8.28□□□□□ -1.08
PDLIM1-205ENST00000493949 CAMPP49913 170 aa8.28□□□□□ -1.08
PDLIM1-205ENST00000493949 LGALS9BQ3B8N2 356 aa8.28□□□□□ -1.08
PDLIM1-205ENST00000493949 LGALS9CQ6DKI2 356 aa8.28□□□□□ -1.08
PDLIM1-205ENST00000493949 ZNF493Q6ZR52 646 aa8.28□□□□□ -1.08
PDLIM1-205ENST00000493949 BPIFA4PQ86YQ2 179 aa8.28□□□□□ -1.08
PDLIM1-205ENST00000493949 HIGD1AQ9Y241 93 aa8.28□□□□□ -1.08
PDLIM1-205ENST00000493949 TNFRSF13BO14836 293 aaPredicted RBP8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 NUDT3O95989 172 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 MOSP00540 346 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 APOHP02749 345 aaPredicted RBP8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 RBP4P02753 201 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 GPR183P32249 361 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 WT1-ASQ06250 92 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 PDE6HQ13956 83 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 PLGLAQ15195 96 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 MPV17L2Q567V2 206 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 OCIAD2Q56VL3 154 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 PRR27Q6MZM9 219 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 COX8CQ7Z4L0 72 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 MOB3BQ86TA1 216 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 OR4X2Q8NGF9 303 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 OR5A1Q8NGJ0 315 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 ST6GALNAC6Q969X2 333 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 Q9H3A6 140 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 CST9LQ9H4G1 147 aa8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 FNDC4Q9H6D8 234 aaPredicted RBP8.27□□□□□ -1.09
PDLIM1-205ENST00000493949 TRAV5A0A0B4J249 113 aa8.26□□□□□ -1.09
PDLIM1-205ENST00000493949 H3BRM9 83 aa8.26□□□□□ -1.09
PDLIM1-205ENST00000493949 IGLV2-23P01705 113 aa8.26□□□□□ -1.09
PDLIM1-205ENST00000493949 HTR1DP28221 377 aa8.26□□□□□ -1.09
PDLIM1-205ENST00000493949 RPL27AP46776 148 aaKnown RBP8.26□□□□□ -1.09
PDLIM1-205ENST00000493949 HSD52Q0P140 79 aa8.26□□□□□ -1.09
PDLIM1-205ENST00000493949 MORN5Q5VZ52 161 aa8.26□□□□□ -1.09
PDLIM1-205ENST00000493949 FA2HQ7L5A8 372 aa8.26□□□□□ -1.09
PDLIM1-205ENST00000493949 ATOH7Q8N100 152 aa8.26□□□□□ -1.09
PDLIM1-205ENST00000493949 OR10W1Q8NGF6 305 aa8.26□□□□□ -1.09
PDLIM1-205ENST00000493949 GTSF1Q8WW33 167 aa8.26□□□□□ -1.09
PDLIM1-205ENST00000493949 LEAP2Q969E1 77 aa8.26□□□□□ -1.09
PDLIM1-205ENST00000493949 B9D2Q9BPU9 175 aa8.26□□□□□ -1.09
PDLIM1-205ENST00000493949 CLEC5AQ9NY25 188 aa8.26□□□□□ -1.09
PDLIM1-205ENST00000493949 KAAG1Q9UBP8 84 aa8.26□□□□□ -1.09
PDLIM1-205ENST00000493949 A0A1W2PPI3 338 aa8.25□□□□□ -1.09
PDLIM1-205ENST00000493949 CGB1A6NKQ9 187 aa8.25□□□□□ -1.09
PDLIM1-205ENST00000493949 SMIM17P0DL12 118 aa8.25□□□□□ -1.09
PDLIM1-205ENST00000493949 HLA-DRB4P13762 266 aa8.25□□□□□ -1.09
PDLIM1-205ENST00000493949 MYOD1P15172 320 aa8.25□□□□□ -1.09
PDLIM1-205ENST00000493949 ZNF841Q6ZN19 808 aa8.25□□□□□ -1.09
PDLIM1-205ENST00000493949 CFHR4Q92496 578 aa8.25□□□□□ -1.09
PDLIM1-205ENST00000493949 LINC00479Q96M42 142 aa8.25□□□□□ -1.09
PDLIM1-205ENST00000493949 AP1S3Q96PC3 154 aa8.25□□□□□ -1.09
PDLIM1-205ENST00000493949 SSBP4Q9BWG4 385 aaPredicted RBP8.25□□□□□ -1.09
PDLIM1-205ENST00000493949 F11RQ9Y624 299 aaKnown RBP8.25□□□□□ -1.09
PDLIM1-205ENST00000493949 U3KQK5 164 aa8.25□□□□□ -1.09
PDLIM1-205ENST00000493949 HLA-DRB4X5D2U9 266 aa8.25□□□□□ -1.09
PDLIM1-205ENST00000493949 HYDINQ4G0P3 5121 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms