RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 ZNF138P52744 262 aa11.03□□□□□ -0.64
ACTB-213ENST00000493945 CCL20P78556 96 aa11.03□□□□□ -0.64
ACTB-213ENST00000493945 IFITM2Q01629 132 aa11.03□□□□□ -0.64
ACTB-213ENST00000493945 ZNF506Q5JVG8 444 aa11.03□□□□□ -0.64
ACTB-213ENST00000493945 SAPCD1Q5SSQ6 148 aa11.03□□□□□ -0.64
ACTB-213ENST00000493945 NBEAL1Q6ZS30 2694 aa11.02□□□□□ -0.64
ACTB-213ENST00000493945 TMEM250H0YL14 139 aa11.02□□□□□ -0.65
ACTB-213ENST00000493945 K7EIL1 84 aa11.02□□□□□ -0.65
ACTB-213ENST00000493945 RPL35AP18077 110 aaKnown RBP11.02□□□□□ -0.65
ACTB-213ENST00000493945 CDKN1BP46527 198 aa11.02□□□□□ -0.65
ACTB-213ENST00000493945 GNG5P63218 68 aa11.02□□□□□ -0.65
ACTB-213ENST00000493945 FLI1Q01543 452 aaPredicted RBP11.02□□□□□ -0.65
ACTB-213ENST00000493945 CCDC28AQ8IWP9 274 aa11.02□□□□□ -0.65
ACTB-213ENST00000493945 CSTL1Q9H114 145 aa11.02□□□□□ -0.65
ACTB-213ENST00000493945 CMYA5Q8N3K9 4069 aa11.02□□□□□ -0.65
ACTB-213ENST00000493945 CA1P00915 261 aaPredicted RBP11.01□□□□□ -0.65
ACTB-213ENST00000493945 INSP01308 110 aa11.01□□□□□ -0.65
ACTB-213ENST00000493945 IGKV3-20P01619 116 aa11.01□□□□□ -0.65
ACTB-213ENST00000493945 FRMD6-AS1P0C7T7 363 aa11.01□□□□□ -0.65
ACTB-213ENST00000493945 DEFA6Q01524 100 aa11.01□□□□□ -0.65
ACTB-213ENST00000493945 ZNF124Q15973 351 aa11.01□□□□□ -0.65
ACTB-213ENST00000493945 GDF5OSQ5U4N7 250 aa11.01□□□□□ -0.65
ACTB-213ENST00000493945 C11orf52Q96A22 123 aa11.01□□□□□ -0.65
ACTB-213ENST00000493945 MED9Q9NWA0 146 aa11.01□□□□□ -0.65
ACTB-213ENST00000493945 ZNF492Q9P255 531 aa11.01□□□□□ -0.65
ACTB-213ENST00000493945 RAB19A4D1S5 217 aa11□□□□□ -0.65
ACTB-213ENST00000493945 A8MTW9 85 aa11□□□□□ -0.65
ACTB-213ENST00000493945 PRAC2D3DTV9 90 aa11□□□□□ -0.65
ACTB-213ENST00000493945 PRB2P02812 416 aaPredicted RBP11□□□□□ -0.65
ACTB-213ENST00000493945 CT45A10P0DMU9 189 aa11□□□□□ -0.65
ACTB-213ENST00000493945 PCNPQ8WW12 178 aaKnown RBP11□□□□□ -0.65
ACTB-213ENST00000493945 C20orf144Q9BQM9 153 aa11□□□□□ -0.65
ACTB-213ENST00000493945 ZFP30Q9Y2G7 519 aa11□□□□□ -0.65
ACTB-213ENST00000493945 AGRNO00468 2067 aa11□□□□□ -0.65
ACTB-213ENST00000493945 TRBV6-1A0A0K0K1D8 114 aa10.99□□□□□ -0.65
ACTB-213ENST00000493945 SCO2A0A1W2PP80 73 aa10.99□□□□□ -0.65
ACTB-213ENST00000493945 GPX1P07203 203 aa10.99□□□□□ -0.65
ACTB-213ENST00000493945 ZNF705DP0CH99 300 aaPredicted RBP10.99□□□□□ -0.65
ACTB-213ENST00000493945 ZNF705BP0CI00 300 aaPredicted RBP10.99□□□□□ -0.65
ACTB-213ENST00000493945 TAS2R60P59551 318 aa10.99□□□□□ -0.65
ACTB-213ENST00000493945 TMEM183BQ1AE95 376 aa10.99□□□□□ -0.65
ACTB-213ENST00000493945 SMIM12Q96EX1 92 aa10.99□□□□□ -0.65
ACTB-213ENST00000493945 CITED4Q96RK1 184 aa10.99□□□□□ -0.65
ACTB-213ENST00000493945 AGPAT4-IT1Q9H0P7 198 aa10.99□□□□□ -0.65
ACTB-213ENST00000493945 BIN3Q9NQY0 253 aa10.99□□□□□ -0.65
ACTB-213ENST00000493945 PSG8Q9UQ74 426 aa10.99□□□□□ -0.65
ACTB-213ENST00000493945 GOLT1BQ9Y3E0 138 aa10.99□□□□□ -0.65
ACTB-213ENST00000493945 CRISP2P16562 243 aa10.98□□□□□ -0.65
ACTB-213ENST00000493945 DEFB1P60022 68 aa10.98□□□□□ -0.65
ACTB-213ENST00000493945 ERCC8Q13216 396 aa10.98□□□□□ -0.65
ACTB-213ENST00000493945 Q6ZWC4 215 aa10.98□□□□□ -0.65
ACTB-213ENST00000493945 PRNTQ86SH4 94 aa10.98□□□□□ -0.65
ACTB-213ENST00000493945 Q86TA4 180 aa10.98□□□□□ -0.65
ACTB-213ENST00000493945 TMEM256Q8N2U0 113 aa10.98□□□□□ -0.65
ACTB-213ENST00000493945 VGLL1Q99990 258 aa10.98□□□□□ -0.65
ACTB-213ENST00000493945 NIPSNAP3BQ9BS92 247 aa10.98□□□□□ -0.65
ACTB-213ENST00000493945 TMEM208Q9BTX3 173 aa10.98□□□□□ -0.65
ACTB-213ENST00000493945 ZMAT4Q9H898 229 aa10.98□□□□□ -0.65
ACTB-213ENST00000493945 TREM1Q9NP99 234 aa10.98□□□□□ -0.65
ACTB-213ENST00000493945 RBMY1BA6NDE4 496 aaKnown RBP10.97□□□□□ -0.65
ACTB-213ENST00000493945 RBMY1EA6NEQ0 496 aaKnown RBP10.97□□□□□ -0.65
ACTB-213ENST00000493945 RBMY1DP0C7P1 496 aaKnown RBP10.97□□□□□ -0.65
ACTB-213ENST00000493945 SPINK13Q1W4C9 94 aa10.97□□□□□ -0.65
ACTB-213ENST00000493945 SMUG1Q53HV7 270 aa10.97□□□□□ -0.65
ACTB-213ENST00000493945 UQCC3Q6UW78 93 aa10.97□□□□□ -0.65
ACTB-213ENST00000493945 C2CD4CQ8TF44 421 aa10.97□□□□□ -0.65
ACTB-213ENST00000493945 IGF2BP2-AS1Q96M15 143 aa10.97□□□□□ -0.65
ACTB-213ENST00000493945 RARRES2Q99969 163 aa10.97□□□□□ -0.65
ACTB-213ENST00000493945 SPATA25Q9BR10 227 aa10.97□□□□□ -0.65
ACTB-213ENST00000493945 KLF12Q9Y4X4 402 aa10.97□□□□□ -0.65
ACTB-213ENST00000493945 TRAV8-1A0A0A6YYK1 113 aa10.96□□□□□ -0.65
ACTB-213ENST00000493945 RPL35P42766 123 aaKnown RBP10.96□□□□□ -0.65
ACTB-213ENST00000493945 GNG4P50150 75 aa10.96□□□□□ -0.65
ACTB-213ENST00000493945 CEBPGP53567 150 aa10.96□□□□□ -0.65
ACTB-213ENST00000493945 FAM74A3Q4VXF1 159 aa10.96□□□□□ -0.65
ACTB-213ENST00000493945 AMTNQ6UX39 209 aa10.96□□□□□ -0.65
ACTB-213ENST00000493945 LINC00322Q6ZN03 302 aaPredicted RBP10.96□□□□□ -0.65
ACTB-213ENST00000493945 Q8TAT8 98 aa10.96□□□□□ -0.65
ACTB-213ENST00000493945 RCHY1Q96PM5 261 aa10.96□□□□□ -0.65
ACTB-213ENST00000493945 SLC35B3Q9H1N7 401 aa10.96□□□□□ -0.65
ACTB-213ENST00000493945 TP53TG1Q9Y2A0 90 aa10.96□□□□□ -0.65
ACTB-213ENST00000493945 C7orf71A4D174 169 aa10.95□□□□□ -0.66
ACTB-213ENST00000493945 M0R2Z0 102 aa10.95□□□□□ -0.66
ACTB-213ENST00000493945 BAGE2Q86Y30 109 aa10.95□□□□□ -0.66
ACTB-213ENST00000493945 B9D2Q9BPU9 175 aa10.95□□□□□ -0.66
ACTB-213ENST00000493945 XCL2Q9UBD3 114 aa10.95□□□□□ -0.66
ACTB-213ENST00000493945 TRAV34A0A0B4J273 112 aa10.94□□□□□ -0.66
ACTB-213ENST00000493945 TRAV21A0A0B4J279 112 aa10.94□□□□□ -0.66
ACTB-213ENST00000493945 KLLNB2CW77 178 aa10.94□□□□□ -0.66
ACTB-213ENST00000493945 C9JCJ5 164 aa10.94□□□□□ -0.66
ACTB-213ENST00000493945 LTAP01374 205 aa10.94□□□□□ -0.66
ACTB-213ENST00000493945 ZNF674Q2M3X9 581 aa10.94□□□□□ -0.66
ACTB-213ENST00000493945 FAM19A4Q96LR4 140 aa10.94□□□□□ -0.66
ACTB-213ENST00000493945 ASCL2Q99929 193 aa10.94□□□□□ -0.66
ACTB-213ENST00000493945 SMIM7Q9BQ49 75 aa10.94□□□□□ -0.66
ACTB-213ENST00000493945 PARLQ9H300 379 aa10.94□□□□□ -0.66
ACTB-213ENST00000493945 H7BYZ3 331 aa10.93□□□□□ -0.66
ACTB-213ENST00000493945 J3KRW8 73 aa10.93□□□□□ -0.66
ACTB-213ENST00000493945 NHLRC4P0CG21 123 aaPredicted RBP10.93□□□□□ -0.66
ACTB-213ENST00000493945 FXYD7P58549 80 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms