RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 DEFA3P59666 94 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 NHLH2Q02577 135 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 GCSAMLQ5JQS6 135 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 MZT2BQ6NZ67 158 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 SSX7Q7RTT5 188 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 STX12Q86Y82 276 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 CCDC28AQ8IWP9 274 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 C6orf223Q8N319 242 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 ZFAND2AQ8N6M9 145 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 GNPNAT1Q96EK6 184 aaPredicted RBP5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 VSIG2Q96IQ7 327 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 ATG101Q9BSB4 218 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 SLC25A2Q9BXI2 301 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 KRTAP1-5Q9BYS1 174 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 NMES1Q9C002 83 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 Q9H8V8 135 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 TRAV12-3A0A0B4J271 114 aa5.79□□□□□ -1.48
SMARCB1-207ENST00000491967 CDK2AP2O75956 126 aa5.79□□□□□ -1.48
SMARCB1-207ENST00000491967 RLN2P04090 185 aa5.79□□□□□ -1.48
SMARCB1-207ENST00000491967 PYYP10082 97 aa5.79□□□□□ -1.48
SMARCB1-207ENST00000491967 S100A10P60903 97 aa5.79□□□□□ -1.48
SMARCB1-207ENST00000491967 BAXQ07812 192 aa5.79□□□□□ -1.48
SMARCB1-207ENST00000491967 CD300CQ08708 224 aa5.79□□□□□ -1.48
SMARCB1-207ENST00000491967 ERCC8Q13216 396 aa5.79□□□□□ -1.48
SMARCB1-207ENST00000491967 ESRGQ1W209 222 aa5.79□□□□□ -1.48
SMARCB1-207ENST00000491967 Q6ZTI0 123 aa5.79□□□□□ -1.48
SMARCB1-207ENST00000491967 ZNF575Q86XF7 245 aa5.79□□□□□ -1.48
SMARCB1-207ENST00000491967 ZNF680Q8NEM1 530 aa5.79□□□□□ -1.48
SMARCB1-207ENST00000491967 FXYD5Q96DB9 178 aa5.79□□□□□ -1.48
SMARCB1-207ENST00000491967 Q9H3A6 140 aa5.79□□□□□ -1.48
SMARCB1-207ENST00000491967 GPN1Q9HCN4 374 aaPredicted RBP5.79□□□□□ -1.48
SMARCB1-207ENST00000491967 GAGE12BA1L429 117 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 SNURFLB1AK76 121 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 E5RGE8 158 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 SPINK4O60575 86 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 GAGE7O76087 117 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 NBEAP1P0C6P0 100 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 GAGE12FP0CL80 117 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 GAGE12GP0CL81 117 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 GAGE12IP0CL82 117 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 TCL1AP56279 114 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 H2BFSP57053 126 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 CYCSP99999 105 aaKnown RBP5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 OR5I1Q13606 314 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 IBA57Q5T440 356 aaKnown RBP5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 EXOC3-AS1Q8N2X6 119 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 OR5C1Q8NGR4 320 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 ENKURQ8TC29 256 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 VGLL1Q99990 258 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 MARVELD1Q9BSK0 173 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 MRPL32Q9BYC8 188 aaKnown RBP5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 KRTAP4-5Q9BYR2 181 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 WDR61Q9GZS3 305 aaKnown RBP5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 SLC25A31Q9H0C2 315 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 TMPRSS5Q9H3S3 457 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 GSN-AS1Q9NRJ2 163 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 OR5AC2Q9NZP5 309 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 ZNF492Q9P255 531 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 TP53TG3Q9ULZ0 132 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 MRPS16Q9Y3D3 137 aaKnown RBP5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 TIMM9Q9Y5J7 89 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 HSPG2P98160 4391 aa5.78□□□□□ -1.48
SMARCB1-207ENST00000491967 A0A096LPF7 62 aa5.77□□□□□ -1.49
SMARCB1-207ENST00000491967 RBAKDNA6NC62 111 aa5.77□□□□□ -1.49
SMARCB1-207ENST00000491967 PRAF2O60831 178 aa5.77□□□□□ -1.49
SMARCB1-207ENST00000491967 BTN1A1Q13410 526 aa5.77□□□□□ -1.49
SMARCB1-207ENST00000491967 CLINT1Q14677 625 aa5.77□□□□□ -1.49
SMARCB1-207ENST00000491967 ICAM4Q14773 271 aa5.77□□□□□ -1.49
SMARCB1-207ENST00000491967 PRR9Q5T870 116 aa5.77□□□□□ -1.49
SMARCB1-207ENST00000491967 MIR17HGQ75NE6 70 aa5.77□□□□□ -1.49
SMARCB1-207ENST00000491967 LYPD1Q8N2G4 141 aa5.77□□□□□ -1.49
SMARCB1-207ENST00000491967 EIF4E3Q8N5X7 224 aaKnown RBP5.77□□□□□ -1.49
SMARCB1-207ENST00000491967 THAP6Q8TBB0 222 aa5.77□□□□□ -1.49
SMARCB1-207ENST00000491967 OR51M1Q9H341 326 aa5.77□□□□□ -1.49
SMARCB1-207ENST00000491967 KLF12Q9Y4X4 402 aa5.77□□□□□ -1.49
SMARCB1-207ENST00000491967 IGKV2-40A0A087WW87 121 aaPredicted RBP5.76□□□□□ -1.49
SMARCB1-207ENST00000491967 A0A0J9YY99 117 aa5.76□□□□□ -1.49
SMARCB1-207ENST00000491967 J3KRW8 73 aa5.76□□□□□ -1.49
SMARCB1-207ENST00000491967 SIX6O95475 246 aa5.76□□□□□ -1.49
SMARCB1-207ENST00000491967 IGKV2D-40P01614 121 aaPredicted RBP5.76□□□□□ -1.49
SMARCB1-207ENST00000491967 RNASE4P34096 147 aaKnown RBP5.76□□□□□ -1.49
SMARCB1-207ENST00000491967 ZNF266Q14584 549 aa5.76□□□□□ -1.49
SMARCB1-207ENST00000491967 TTC32Q5I0X7 151 aa5.76□□□□□ -1.49
SMARCB1-207ENST00000491967 Q6ZQT7 251 aa5.76□□□□□ -1.49
SMARCB1-207ENST00000491967 Q6ZRN7 208 aaPredicted RBP5.76□□□□□ -1.49
SMARCB1-207ENST00000491967 IQCF2Q8IXL9 164 aa5.76□□□□□ -1.49
SMARCB1-207ENST00000491967 BLNKQ8WV28 456 aa5.76□□□□□ -1.49
SMARCB1-207ENST00000491967 ST6GAL2Q96JF0 529 aa5.76□□□□□ -1.49
SMARCB1-207ENST00000491967 AAMDCQ9H7C9 122 aa5.76□□□□□ -1.49
SMARCB1-207ENST00000491967 KCNIP2Q9NS61 270 aa5.76□□□□□ -1.49
SMARCB1-207ENST00000491967 FUT9Q9Y231 359 aa5.76□□□□□ -1.49
SMARCB1-207ENST00000491967 INMT-MINDY4F8WBC2 141 aa5.75□□□□□ -1.49
SMARCB1-207ENST00000491967 GPX1P07203 203 aa5.75□□□□□ -1.49
SMARCB1-207ENST00000491967 ZNF138P52744 262 aa5.75□□□□□ -1.49
SMARCB1-207ENST00000491967 FHL2Q14192 279 aa5.75□□□□□ -1.49
SMARCB1-207ENST00000491967 RGS21Q2M5E4 152 aa5.75□□□□□ -1.49
SMARCB1-207ENST00000491967 TDRG1Q3Y452 100 aa5.75□□□□□ -1.49
SMARCB1-207ENST00000491967 TMEM78Q5T7P6 136 aa5.75□□□□□ -1.49
SMARCB1-207ENST00000491967 Q6AWC8 147 aa5.75□□□□□ -1.49
SMARCB1-207ENST00000491967 ARL6IP6Q8N6S5 226 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 270.8 ms