RNA–Protein interactions for RNA: ENST00000491831.5

AFF4-209, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 1 (best)

Gene AFF4, Length 1,667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-209ENST00000491831 ERCC8Q13216 396 aa12.49□□□□□ -0.41
AFF4-209ENST00000491831 C11orf52Q96A22 123 aa12.49□□□□□ -0.41
AFF4-209ENST00000491831 SMIM7Q9BQ49 75 aa12.49□□□□□ -0.41
AFF4-209ENST00000491831 NIPSNAP3BQ9BS92 247 aa12.49□□□□□ -0.41
AFF4-209ENST00000491831 A0A0J9YX75 114 aa12.48□□□□□ -0.41
AFF4-209ENST00000491831 H3BMM0 161 aa12.48□□□□□ -0.41
AFF4-209ENST00000491831 FAM74A3Q4VXF1 159 aa12.48□□□□□ -0.41
AFF4-209ENST00000491831 SAMD13Q5VXD3 122 aa12.48□□□□□ -0.41
AFF4-209ENST00000491831 OR4B1Q8NGF8 309 aa12.48□□□□□ -0.41
AFF4-209ENST00000491831 DERL1Q9BUN8 251 aa12.48□□□□□ -0.41
AFF4-209ENST00000491831 AAMDCQ9H7C9 122 aa12.48□□□□□ -0.41
AFF4-209ENST00000491831 TENM3Q9P273 2699 aa12.48□□□□□ -0.41
AFF4-209ENST00000491831 SNAPINO95295 136 aa12.48□□□□□ -0.41
AFF4-209ENST00000491831 SLC25A5P05141 298 aaKnown RBP12.48□□□□□ -0.41
AFF4-209ENST00000491831 HLA-DRB4P13762 266 aa12.48□□□□□ -0.41
AFF4-209ENST00000491831 CNN1P51911 297 aaKnown RBP12.48□□□□□ -0.41
AFF4-209ENST00000491831 FOXI2Q6ZQN5 318 aa12.48□□□□□ -0.41
AFF4-209ENST00000491831 TRPT1Q86TN4 253 aaKnown RBP12.48□□□□□ -0.41
AFF4-209ENST00000491831 LYPD1Q8N2G4 141 aa12.48□□□□□ -0.41
AFF4-209ENST00000491831 OR8A1Q8NGG7 326 aa12.48□□□□□ -0.41
AFF4-209ENST00000491831 OTORQ9NRC9 128 aa12.48□□□□□ -0.41
AFF4-209ENST00000491831 HLA-DRB4X5D2U9 266 aa12.48□□□□□ -0.41
AFF4-209ENST00000491831 ATRAIDQ6UW56 229 aa12.47□□□□□ -0.41
AFF4-209ENST00000491831 LINC00322Q6ZN03 302 aaPredicted RBP12.47□□□□□ -0.41
AFF4-209ENST00000491831 STHQ8IWL8 128 aa12.47□□□□□ -0.41
AFF4-209ENST00000491831 SGK494Q96LW2 274 aa12.47□□□□□ -0.41
AFF4-209ENST00000491831 VGLL1Q99990 258 aa12.47□□□□□ -0.41
AFF4-209ENST00000491831 EPDR1Q9UM22 224 aa12.47□□□□□ -0.41
AFF4-209ENST00000491831 C5orf17Q8NAS9 161 aa12.46□□□□□ -0.41
AFF4-209ENST00000491831 CLRN3Q8NCR9 226 aa12.46□□□□□ -0.41
AFF4-209ENST00000491831 TVP23CQ96ET8 276 aa12.46□□□□□ -0.41
AFF4-209ENST00000491831 TCEAL7Q9BRU2 100 aa12.46□□□□□ -0.41
AFF4-209ENST00000491831 M0R036 132 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 GIG44P09565 113 aaPredicted RBP12.45□□□□□ -0.42
AFF4-209ENST00000491831 CMC4P56277 68 aaPredicted RBP12.45□□□□□ -0.42
AFF4-209ENST00000491831 TMEM241Q24JQ0 296 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 EBLN2Q6P2I7 272 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 Q8TAT8 98 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 C2CD4CQ8TF44 421 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 HIST1H2BAQ96A08 127 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 RETNQ9HD89 108 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 NAT8Q9UHE5 227 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 COL7A1Q02388 2944 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 HUWE1Q7Z6Z7 4374 aaKnown RBP12.45□□□□□ -0.42
AFF4-209ENST00000491831 TRAV8-1A0A0A6YYK1 113 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 DIRC3C9JPN6 131 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 PEX7O00628 323 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 SCO1O75880 301 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 RPL35P42766 123 aaKnown RBP12.45□□□□□ -0.42
AFF4-209ENST00000491831 KIR3DS1Q14943 382 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 GOLT1AQ6ZVE7 132 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 SBSPONQ8IVN8 264 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 CMTM2Q8TAZ6 248 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 SDF2L1Q9HCN8 221 aa12.45□□□□□ -0.42
AFF4-209ENST00000491831 LOC102724200A0A096LPH7 203 aaPredicted RBP12.44□□□□□ -0.42
AFF4-209ENST00000491831 A8MZ25 164 aa12.44□□□□□ -0.42
AFF4-209ENST00000491831 AMTNQ6UX39 209 aa12.44□□□□□ -0.42
AFF4-209ENST00000491831 MRPL53Q96EL3 112 aaKnown RBP12.44□□□□□ -0.42
AFF4-209ENST00000491831 LINC00479Q96M42 142 aa12.44□□□□□ -0.42
AFF4-209ENST00000491831 CLEC5AQ9NY25 188 aa12.44□□□□□ -0.42
AFF4-209ENST00000491831 M0R2Z0 102 aa12.43□□□□□ -0.42
AFF4-209ENST00000491831 TCRAP04437 139 aa12.43□□□□□ -0.42
AFF4-209ENST00000491831 AKR1C3P42330 323 aa12.43□□□□□ -0.42
AFF4-209ENST00000491831 PNRC1Q12796 327 aaPredicted RBP12.43□□□□□ -0.42
AFF4-209ENST00000491831 ATG101Q9BSB4 218 aa12.43□□□□□ -0.42
AFF4-209ENST00000491831 AGPAT4-IT1Q9H0P7 198 aa12.43□□□□□ -0.42
AFF4-209ENST00000491831 PRELID1Q9Y255 219 aa12.43□□□□□ -0.42
AFF4-209ENST00000491831 TRBV20OR9-2A0A075B6H5 130 aa12.42□□□□□ -0.42
AFF4-209ENST00000491831 J3KRW8 73 aa12.42□□□□□ -0.42
AFF4-209ENST00000491831 CT45A10P0DMU9 189 aa12.42□□□□□ -0.42
AFF4-209ENST00000491831 SPINK13Q1W4C9 94 aa12.42□□□□□ -0.42
AFF4-209ENST00000491831 TRAV34A0A0B4J273 112 aa12.42□□□□□ -0.42
AFF4-209ENST00000491831 NPIPB6E9PJ23 425 aa12.42□□□□□ -0.42
AFF4-209ENST00000491831 RPL23P62829 140 aaKnown RBP12.42□□□□□ -0.42
AFF4-209ENST00000491831 OR10J6PQ8NGY7 276 aa12.42□□□□□ -0.42
AFF4-209ENST00000491831 TRAV12-2A0A075B6T6 113 aa12.41□□□□□ -0.42
AFF4-209ENST00000491831 C7orf77A4D0Y5 90 aa12.41□□□□□ -0.42
AFF4-209ENST00000491831 PGPEP1LA6NFU8 196 aa12.41□□□□□ -0.42
AFF4-209ENST00000491831 C9JCJ5 164 aa12.41□□□□□ -0.42
AFF4-209ENST00000491831 CA1P00915 261 aaPredicted RBP12.41□□□□□ -0.42
AFF4-209ENST00000491831 CSN1S1P47710 185 aa12.41□□□□□ -0.42
AFF4-209ENST00000491831 ADIRFQ15847 76 aa12.41□□□□□ -0.42
AFF4-209ENST00000491831 RPS10P5Q9NQ39 176 aa12.41□□□□□ -0.42
AFF4-209ENST00000491831 XCL2Q9UBD3 114 aa12.41□□□□□ -0.42
AFF4-209ENST00000491831 A8MTW9 85 aa12.4□□□□□ -0.42
AFF4-209ENST00000491831 TAS2R60P59551 318 aa12.4□□□□□ -0.42
AFF4-209ENST00000491831 RHEBQ15382 184 aa12.4□□□□□ -0.42
AFF4-209ENST00000491831 DEFB135Q30KP9 77 aa12.4□□□□□ -0.42
AFF4-209ENST00000491831 KLF12Q9Y4X4 402 aa12.4□□□□□ -0.42
AFF4-209ENST00000491831 GNG4P50150 75 aa12.39□□□□□ -0.43
AFF4-209ENST00000491831 UBE2G1P62253 170 aa12.39□□□□□ -0.43
AFF4-209ENST00000491831 TMEM183BQ1AE95 376 aa12.39□□□□□ -0.43
AFF4-209ENST00000491831 CENPWQ5EE01 88 aa12.39□□□□□ -0.43
AFF4-209ENST00000491831 Q6ZQT7 251 aa12.39□□□□□ -0.43
AFF4-209ENST00000491831 LINC01551Q86U37 167 aa12.39□□□□□ -0.43
AFF4-209ENST00000491831 OCC1Q8TAD7 63 aa12.39□□□□□ -0.43
AFF4-209ENST00000491831 CSTL1Q9H114 145 aa12.39□□□□□ -0.43
AFF4-209ENST00000491831 DUSP14O95147 198 aaKnown RBP12.38□□□□□ -0.43
AFF4-209ENST00000491831 IGLV2-11P01706 119 aa12.38□□□□□ -0.43
AFF4-209ENST00000491831 RBMY1A1P0DJD3 496 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms