RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 CSNK1G2-AS1Q8NCQ2 148 aa10.9□□□□□ -0.66
CDC42SE1-205ENST00000491825 SFT2D1Q8WV19 159 aa10.9□□□□□ -0.66
CDC42SE1-205ENST00000491825 TRAV1-1A0A0B4J248 108 aa10.89□□□□□ -0.67
CDC42SE1-205ENST00000491825 GGTLC3B5MD39 225 aa10.89□□□□□ -0.67
CDC42SE1-205ENST00000491825 BOLA2-SMG1P6H3BVE0 249 aa10.89□□□□□ -0.67
CDC42SE1-205ENST00000491825 SLC25A5P05141 298 aaKnown RBP10.89□□□□□ -0.67
CDC42SE1-205ENST00000491825 H2AFB1P0C5Y9 115 aa10.89□□□□□ -0.67
CDC42SE1-205ENST00000491825 C9orf47Q6ZRZ4 202 aa10.89□□□□□ -0.67
CDC42SE1-205ENST00000491825 IQCF2Q8IXL9 164 aa10.89□□□□□ -0.67
CDC42SE1-205ENST00000491825 C5orf17Q8NAS9 161 aa10.89□□□□□ -0.67
CDC42SE1-205ENST00000491825 CMTM2Q8TAZ6 248 aa10.89□□□□□ -0.67
CDC42SE1-205ENST00000491825 NKX6-2Q9C056 277 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE1-205ENST00000491825 SLC35B3Q9H1N7 401 aa10.89□□□□□ -0.67
CDC42SE1-205ENST00000491825 BOLA1Q9Y3E2 137 aa10.89□□□□□ -0.67
CDC42SE1-205ENST00000491825 VPS13DQ5THJ4 4388 aa10.88□□□□□ -0.67
CDC42SE1-205ENST00000491825 SERTM2A0A1B0GWG4 89 aa10.88□□□□□ -0.67
CDC42SE1-205ENST00000491825 PGPA6NDG6 321 aa10.88□□□□□ -0.67
CDC42SE1-205ENST00000491825 DIRC3C9JPN6 131 aa10.88□□□□□ -0.67
CDC42SE1-205ENST00000491825 LY6G6CO95867 125 aa10.88□□□□□ -0.67
CDC42SE1-205ENST00000491825 LINC00477Q96M19 166 aa10.88□□□□□ -0.67
CDC42SE1-205ENST00000491825 TMPRSS5Q9H3S3 457 aa10.88□□□□□ -0.67
CDC42SE1-205ENST00000491825 IGKV2-40A0A087WW87 121 aaPredicted RBP10.87□□□□□ -0.67
CDC42SE1-205ENST00000491825 TRBV7-9A0A0J9YWB2 115 aa10.87□□□□□ -0.67
CDC42SE1-205ENST00000491825 FAM74A7A6NL05 159 aa10.87□□□□□ -0.67
CDC42SE1-205ENST00000491825 IGKV2D-40P01614 121 aaPredicted RBP10.87□□□□□ -0.67
CDC42SE1-205ENST00000491825 PPT1P50897 306 aa10.87□□□□□ -0.67
CDC42SE1-205ENST00000491825 ALKAL2Q6UX46 152 aa10.87□□□□□ -0.67
CDC42SE1-205ENST00000491825 FAM19A4Q96LR4 140 aa10.87□□□□□ -0.67
CDC42SE1-205ENST00000491825 TCEAL7Q9BRU2 100 aa10.87□□□□□ -0.67
CDC42SE1-205ENST00000491825 XCL2Q9UBD3 114 aa10.87□□□□□ -0.67
CDC42SE1-205ENST00000491825 YTHDF2Q9Y5A9 579 aaKnown RBP10.87□□□□□ -0.67
CDC42SE1-205ENST00000491825 ZNF705EA8MWA4 302 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE1-205ENST00000491825 TEX46H3BTG2 121 aa10.86□□□□□ -0.67
CDC42SE1-205ENST00000491825 CRXO43186 299 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE1-205ENST00000491825 HBE1P02100 147 aa10.86□□□□□ -0.67
CDC42SE1-205ENST00000491825 CT45A10P0DMU9 189 aa10.86□□□□□ -0.67
CDC42SE1-205ENST00000491825 PRB4P10163 310 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE1-205ENST00000491825 TSPOP30536 169 aa10.86□□□□□ -0.67
CDC42SE1-205ENST00000491825 CDKN1BP46527 198 aa10.86□□□□□ -0.67
CDC42SE1-205ENST00000491825 SPINK13Q1W4C9 94 aa10.86□□□□□ -0.67
CDC42SE1-205ENST00000491825 TMEM78Q5T7P6 136 aa10.86□□□□□ -0.67
CDC42SE1-205ENST00000491825 ZNF705AQ6ZN79 300 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE1-205ENST00000491825 IGF2BP2-AS1Q96M15 143 aa10.86□□□□□ -0.67
CDC42SE1-205ENST00000491825 AGPAT4-IT1Q9H0P7 198 aa10.86□□□□□ -0.67
CDC42SE1-205ENST00000491825 PPP1R14DQ9NXH3 145 aa10.86□□□□□ -0.67
CDC42SE1-205ENST00000491825 M0R2Z0 102 aa10.85□□□□□ -0.67
CDC42SE1-205ENST00000491825 INSP01308 110 aa10.85□□□□□ -0.67
CDC42SE1-205ENST00000491825 TCRAP04437 139 aa10.85□□□□□ -0.67
CDC42SE1-205ENST00000491825 NMBP08949 121 aa10.85□□□□□ -0.67
CDC42SE1-205ENST00000491825 CRISP2P16562 243 aa10.85□□□□□ -0.67
CDC42SE1-205ENST00000491825 LEPP41159 167 aa10.85□□□□□ -0.67
CDC42SE1-205ENST00000491825 FXYD7P58549 80 aa10.85□□□□□ -0.67
CDC42SE1-205ENST00000491825 SUMO1P63165 101 aaKnown RBP10.85□□□□□ -0.67
CDC42SE1-205ENST00000491825 VGLL1Q99990 258 aa10.85□□□□□ -0.67
CDC42SE1-205ENST00000491825 ZNF492Q9P255 531 aa10.85□□□□□ -0.67
CDC42SE1-205ENST00000491825 KLK5Q9Y337 293 aaPredicted RBP10.85□□□□□ -0.67
CDC42SE1-205ENST00000491825 HECTD4Q9Y4D8 3996 aa10.85□□□□□ -0.67
CDC42SE1-205ENST00000491825 DNAH6Q9C0G6 4158 aa10.84□□□□□ -0.67
CDC42SE1-205ENST00000491825 ZNF138P52744 262 aa10.84□□□□□ -0.67
CDC42SE1-205ENST00000491825 UBE2G2P60604 165 aa10.84□□□□□ -0.67
CDC42SE1-205ENST00000491825 ERCC8Q13216 396 aa10.84□□□□□ -0.67
CDC42SE1-205ENST00000491825 GOLT1AQ6ZVE7 132 aa10.84□□□□□ -0.67
CDC42SE1-205ENST00000491825 CCDC28AQ8IWP9 274 aa10.84□□□□□ -0.67
CDC42SE1-205ENST00000491825 PHLDA1Q8WV24 401 aaPredicted RBP10.84□□□□□ -0.67
CDC42SE1-205ENST00000491825 C20orf144Q9BQM9 153 aa10.84□□□□□ -0.67
CDC42SE1-205ENST00000491825 ATG101Q9BSB4 218 aa10.84□□□□□ -0.67
CDC42SE1-205ENST00000491825 C11orf68Q9H3H3 251 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-205ENST00000491825 MANBALQ9NQG1 85 aa10.84□□□□□ -0.67
CDC42SE1-205ENST00000491825 EPDR1Q9UM22 224 aa10.84□□□□□ -0.67
CDC42SE1-205ENST00000491825 LENEPQ9Y5L5 61 aa10.84□□□□□ -0.67
CDC42SE1-205ENST00000491825 FBLL1A6NHQ2 334 aaKnown RBP10.83□□□□□ -0.68
CDC42SE1-205ENST00000491825 KLLNB2CW77 178 aa10.83□□□□□ -0.68
CDC42SE1-205ENST00000491825 GNG5P63218 68 aa10.83□□□□□ -0.68
CDC42SE1-205ENST00000491825 CYB561D1Q8N8Q1 229 aa10.83□□□□□ -0.68
CDC42SE1-205ENST00000491825 OR11H2Q8NH07 326 aa10.83□□□□□ -0.68
CDC42SE1-205ENST00000491825 HIST1H2BAQ96A08 127 aa10.83□□□□□ -0.68
CDC42SE1-205ENST00000491825 NEU1Q99519 415 aa10.83□□□□□ -0.68
CDC42SE1-205ENST00000491825 RARRES2Q99969 163 aa10.83□□□□□ -0.68
CDC42SE1-205ENST00000491825 RPH3ALQ9UNE2 315 aa10.83□□□□□ -0.68
CDC42SE1-205ENST00000491825 GOLT1BQ9Y3E0 138 aa10.83□□□□□ -0.68
CDC42SE1-205ENST00000491825 X6R8D5 127 aa10.83□□□□□ -0.68
CDC42SE1-205ENST00000491825 HERC2O95714 4834 aa10.83□□□□□ -0.68
CDC42SE1-205ENST00000491825 A0A1B0GV50 99 aa10.82□□□□□ -0.68
CDC42SE1-205ENST00000491825 K7EQM0 130 aa10.82□□□□□ -0.68
CDC42SE1-205ENST00000491825 PAGE4O60829 102 aa10.82□□□□□ -0.68
CDC42SE1-205ENST00000491825 MIFP14174 115 aa10.82□□□□□ -0.68
CDC42SE1-205ENST00000491825 GFI1BQ5VTD9 330 aa10.82□□□□□ -0.68
CDC42SE1-205ENST00000491825 TEX261Q6UWH6 196 aa10.82□□□□□ -0.68
CDC42SE1-205ENST00000491825 C1orf158Q8N1D5 194 aa10.82□□□□□ -0.68
CDC42SE1-205ENST00000491825 TMEM256Q8N2U0 113 aa10.82□□□□□ -0.68
CDC42SE1-205ENST00000491825 TMEM75Q8N9X5 138 aa10.82□□□□□ -0.68
CDC42SE1-205ENST00000491825 LYPD6BQ8NI32 183 aa10.82□□□□□ -0.68
CDC42SE1-205ENST00000491825 TRAV12-2A0A075B6T6 113 aa10.81□□□□□ -0.68
CDC42SE1-205ENST00000491825 SMIM9A6NGZ8 99 aa10.81□□□□□ -0.68
CDC42SE1-205ENST00000491825 PEX7O00628 323 aa10.81□□□□□ -0.68
CDC42SE1-205ENST00000491825 BLOC1S1P78537 153 aa10.81□□□□□ -0.68
CDC42SE1-205ENST00000491825 CCL20P78556 96 aa10.81□□□□□ -0.68
CDC42SE1-205ENST00000491825 LGALS9CQ6DKI2 356 aa10.81□□□□□ -0.68
CDC42SE1-205ENST00000491825 ZFAND2AQ8N6M9 145 aa10.81□□□□□ -0.68
CDC42SE1-205ENST00000491825 Q8NAQ8 132 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms