RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 ODF3Q96PU9 254 aa5.81□□□□□ -1.48
LSM2-213ENST00000491421 NMES1Q9C002 83 aa5.81□□□□□ -1.48
LSM2-213ENST00000491421 SLC25A31Q9H0C2 315 aa5.81□□□□□ -1.48
LSM2-213ENST00000491421 OR5AC2Q9NZP5 309 aa5.81□□□□□ -1.48
LSM2-213ENST00000491421 TIMM9Q9Y5J7 89 aa5.81□□□□□ -1.48
LSM2-213ENST00000491421 KIAA1109Q2LD37 5005 aa5.81□□□□□ -1.48
LSM2-213ENST00000491421 TRAV12-3A0A0B4J271 114 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 A0A1B0GVY2 172 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 SNURFLB1AK76 121 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 INMT-MINDY4F8WBC2 141 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 M0R3E3 92 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 NDUFB4O95168 129 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 CYCSP99999 105 aaKnown RBP5.8□□□□□ -1.48
LSM2-213ENST00000491421 IFITM3Q01628 133 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 ERCC8Q13216 396 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 PDE6HQ13956 83 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 CLINT1Q14677 625 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 SOHLH1Q5JUK2 328 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 Q6ZR54 194 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 BLNKQ8WV28 456 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 SLC25A2Q9BXI2 301 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 AAMDCQ9H7C9 122 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 KCNIP2Q9NS61 270 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 PTTG2Q9NZH5 202 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 PRELID1Q9Y255 219 aa5.8□□□□□ -1.48
LSM2-213ENST00000491421 DNAH17Q9UFH2 4485 aa5.79□□□□□ -1.48
LSM2-213ENST00000491421 GAGE12BA1L429 117 aa5.79□□□□□ -1.48
LSM2-213ENST00000491421 C7orf71A4D174 169 aa5.79□□□□□ -1.48
LSM2-213ENST00000491421 H0YIZ8 118 aa5.79□□□□□ -1.48
LSM2-213ENST00000491421 GAGE7O76087 117 aa5.79□□□□□ -1.48
LSM2-213ENST00000491421 SLC25A5P05141 298 aaKnown RBP5.79□□□□□ -1.48
LSM2-213ENST00000491421 GAGE12FP0CL80 117 aa5.79□□□□□ -1.48
LSM2-213ENST00000491421 GAGE12GP0CL81 117 aa5.79□□□□□ -1.48
LSM2-213ENST00000491421 GAGE12IP0CL82 117 aa5.79□□□□□ -1.48
LSM2-213ENST00000491421 CCL18P55774 89 aa5.79□□□□□ -1.48
LSM2-213ENST00000491421 OR5I1Q13606 314 aa5.79□□□□□ -1.48
LSM2-213ENST00000491421 C1orf134Q5TEV5 83 aa5.79□□□□□ -1.48
LSM2-213ENST00000491421 MIR17HGQ75NE6 70 aa5.79□□□□□ -1.48
LSM2-213ENST00000491421 EXOC3-AS1Q8N2X6 119 aa5.79□□□□□ -1.48
LSM2-213ENST00000491421 RNF141Q8WVD5 230 aa5.79□□□□□ -1.48
LSM2-213ENST00000491421 PYGO2Q9BRQ0 406 aa5.79□□□□□ -1.48
LSM2-213ENST00000491421 WDR61Q9GZS3 305 aaKnown RBP5.79□□□□□ -1.48
LSM2-213ENST00000491421 CHTOPQ9Y3Y2 248 aaKnown RBP5.79□□□□□ -1.48
LSM2-213ENST00000491421 PKHD1P08F94 4074 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 TRAV26-1A0A087WT03 109 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 C17orf112F2Z3M2 114 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 SSNA1O43805 119 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 S100A9P06702 114 aaKnown RBP5.78□□□□□ -1.48
LSM2-213ENST00000491421 NBEAP1P0C6P0 100 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 PET100P0DJ07 73 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 M6PRP20645 277 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 RNASE4P34096 147 aaKnown RBP5.78□□□□□ -1.48
LSM2-213ENST00000491421 H2BFSP57053 126 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 DEFA1P59665 94 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 DEFA3P59666 94 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 BTN1A1Q13410 526 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 ICAM4Q14773 271 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 FAM122CQ6P4D5 195 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 LINC00612Q8N6U2 182 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 PPP1R1CQ8WVI7 109 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 GNPNAT1Q96EK6 184 aaPredicted RBP5.78□□□□□ -1.48
LSM2-213ENST00000491421 FAM167A-AS1Q96KT0 104 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 LINC00477Q96M19 166 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 ATP5SQ99766 215 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 MARVELD1Q9BSK0 173 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 MRPL32Q9BYC8 188 aaKnown RBP5.78□□□□□ -1.48
LSM2-213ENST00000491421 OR51M1Q9H341 326 aa5.78□□□□□ -1.48
LSM2-213ENST00000491421 IGKV2-40A0A087WW87 121 aaPredicted RBP5.77□□□□□ -1.49
LSM2-213ENST00000491421 NBDYA0A0U1RRE5 68 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 KLLNB2CW77 178 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 OR7C2O60412 319 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 IGKV2D-40P01614 121 aaPredicted RBP5.77□□□□□ -1.49
LSM2-213ENST00000491421 GPX1P07203 203 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 OR10J4P0C629 311 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 CD300CQ08708 224 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 DAZ2Q13117 558 aaKnown RBP5.77□□□□□ -1.49
LSM2-213ENST00000491421 TMEM78Q5T7P6 136 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 C9orf47Q6ZRZ4 202 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 Q6ZTI0 123 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 ZNF680Q8NEM1 530 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 ZNRF2Q8NHG8 242 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 FAM19A4Q96LR4 140 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 VGLL1Q99990 258 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 PAXXQ9BUH6 204 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 AGPAT4-IT1Q9H0P7 198 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 GSN-AS1Q9NRJ2 163 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 FUT9Q9Y231 359 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 LINC00588Q9Y4M8 146 aa5.77□□□□□ -1.49
LSM2-213ENST00000491421 PCLOQ9Y6V0 5065 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 TRGV2A0A075B6R0 118 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 A0A0J9YY99 117 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 ZNF324O75467 553 aaPredicted RBP5.76□□□□□ -1.49
LSM2-213ENST00000491421 MPC2O95563 127 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 IFNA5P01569 189 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 NMBP08949 121 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 CRISP2P16562 243 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 HOXA5P20719 270 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 UBE2L3P68036 154 aaKnown RBP5.76□□□□□ -1.49
LSM2-213ENST00000491421 ANXA2RQ3ZCQ2 193 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 FFAR4Q5NUL3 377 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms