RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	PKDREJ	Q9NTG1	2253 aa		4.92	□□□□□ -1.62
FN1-223	ENST00000490833	TRAV21	A0A0B4J279	112 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	LINC01546	A6NGU7	62 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	PRSS47	A8MTI9	375 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	TCAP	O15273	167 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	SIVA1	O15304	175 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	SH2D1A	O60880	128 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	ATP5L	O75964	103 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	LY6H	O94772	140 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	IGHV4-39	P01824	125 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	TRGV3	P03979	118 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	IGLC3	P0DOY3	106 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	LINC00310	P59036	64 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	KLF17	Q5JT82	389 aa	Predicted RBP	4.91	□□□□□ -1.62
FN1-223	ENST00000490833	LYZL1	Q6UWQ5	148 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833		Q6ZN92	141 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	GPHB5	Q86YW7	130 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	LINC01356	Q8N9X3	169 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	C16orf92	Q96LL3	132 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	PRELID3A	Q96N28	172 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	PAM16	Q9Y3D7	125 aa		4.91	□□□□□ -1.62
FN1-223	ENST00000490833	TLN1	Q9Y490	2541 aa	Known RBP	4.91	□□□□□ -1.62
FN1-223	ENST00000490833	CHD6	Q8TD26	2715 aa		4.9	□□□□□ -1.62
FN1-223	ENST00000490833	CHD8	Q9HCK8	2581 aa		4.9	□□□□□ -1.62
FN1-223	ENST00000490833	DMXL1	Q9Y485	3027 aa		4.9	□□□□□ -1.62
FN1-223	ENST00000490833	TRAV8-1	A0A0A6YYK1	113 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833		A6NDX4	124 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	OR4C46	A6NHA9	309 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	C2orf70	A6NJV1	201 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	HBD	P02042	147 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	IGLC6	P0CF74	106 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	CD24	P25063	80 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	NDP	Q00604	133 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	CDSN	Q15517	529 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	LGALS9B	Q3B8N2	356 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	C19orf54	Q5BKX5	351 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	GDF5OS	Q5U4N7	250 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	LGALS9C	Q6DKI2	356 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	SLC25A34	Q6PIV7	304 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	CLEC19A	Q6UXS0	136 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.9	□□□□□ -1.63
FN1-223	ENST00000490833	BOD1L2	Q8IYS8	172 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	LRRC75A-AS1	Q8N1F1	130 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	DYNAP	Q8N1N2	210 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	PIFO	Q8TCI5	191 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	MRAP2	Q96G30	205 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	SGK494	Q96LW2	274 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	RCHY1	Q96PM5	261 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	ODF3	Q96PU9	254 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	DAZ1	Q9NQZ3	744 aa	Known RBP	4.9	□□□□□ -1.63
FN1-223	ENST00000490833	BEX4	Q9NWD9	120 aa	Predicted RBP	4.9	□□□□□ -1.63
FN1-223	ENST00000490833	NCOR2	Q9Y618	2525 aa		4.9	□□□□□ -1.63
FN1-223	ENST00000490833	TPR	P12270	2363 aa	Known RBP	4.9	□□□□□ -1.63
FN1-223	ENST00000490833	IGHV1-24	A0A0C4DH33	117 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833		M0R3E3	92 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	DLEU1	O43261	78 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	ELANE	P08246	267 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	ARMS2	P0C7Q2	107 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	COX6B1	P14854	86 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	PPIF	P30405	207 aa	Known RBP	4.89	□□□□□ -1.63
FN1-223	ENST00000490833	TSPO	P30536	169 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	CRIP1	P50238	77 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
FN1-223	ENST00000490833	SCGB2A2	Q13296	93 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	LINC01545	Q5VT33	79 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	RUSC1-AS1	Q66K80	236 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	AMN1	Q8IY45	258 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	BCL6B	Q8N143	479 aa	Predicted RBP	4.89	□□□□□ -1.63
FN1-223	ENST00000490833	FAM19A2	Q8N3H0	131 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	OR9G4	Q8NGQ1	327 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	C17orf77	Q96MU5	243 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	C20orf78	Q9BR46	151 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	TPPP3	Q9BW30	176 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	PEF1	Q9UBV8	284 aa	Known RBP	4.89	□□□□□ -1.63
FN1-223	ENST00000490833	SMAD5-AS1	Q9Y6J3	95 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	FRY	Q5TBA9	3013 aa		4.89	□□□□□ -1.63
FN1-223	ENST00000490833	PKD1L2	Q7Z442	2459 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833	ABCA4	P78363	2273 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833		H3BTX0	84 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833		M0QZ24	198 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833	FCER1G	P30273	86 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833	DLX1	P56177	255 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833	SNRPD3	P62318	126 aa	Known RBP	4.88	□□□□□ -1.63
FN1-223	ENST00000490833	LOXL1	Q08397	574 aa	Predicted RBP	4.88	□□□□□ -1.63
FN1-223	ENST00000490833	ORMDL2	Q53FV1	153 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833	FAM120AOS	Q5T036	256 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833	SPANXN1	Q5VSR9	72 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833	PRSS57	Q6UWY2	283 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833	MYOZ3	Q8TDC0	251 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833	ORAOV1	Q8WV07	137 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833	GLMP	Q8WWB7	406 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833	CCDC140	Q96MF4	163 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833	ZNF747	Q9BV97	191 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833	SNHG12	Q9BXW3	62 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833	ATRX	P46100	2492 aa		4.88	□□□□□ -1.63
FN1-223	ENST00000490833	PIEZO2	Q9H5I5	2752 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.87	□□□□□ -1.63
FN1-223	ENST00000490833	TRAV40	A0A0B4J280	105 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	IGHV7-4-1	A0A0J9YVY3	117 aa		4.87	□□□□□ -1.63

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