RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 HECTD4Q9Y4D8 3996 aa22.04■■□□□ 1.12
LDB1-204ENST00000490751 IGKV2-40A0A087WW87 121 aaPredicted RBP22.04■■□□□ 1.12
LDB1-204ENST00000490751 C7orf71A4D174 169 aa22.04■■□□□ 1.12
LDB1-204ENST00000490751 IFNA5P01569 189 aa22.04■■□□□ 1.12
LDB1-204ENST00000490751 IGKV2D-40P01614 121 aaPredicted RBP22.04■■□□□ 1.12
LDB1-204ENST00000490751 SCGB1C1Q8TD33 95 aa22.04■■□□□ 1.12
LDB1-204ENST00000490751 RNF141Q8WVD5 230 aa22.04■■□□□ 1.12
LDB1-204ENST00000490751 FAM19A4Q96LR4 140 aa22.04■■□□□ 1.12
LDB1-204ENST00000490751 ALG5Q9Y673 324 aa22.04■■□□□ 1.12
LDB1-204ENST00000490751 IGLV2-18A0A075B6J9 118 aa22.03■■□□□ 1.12
LDB1-204ENST00000490751 OR7C2O60412 319 aa22.03■■□□□ 1.12
LDB1-204ENST00000490751 PHYHIPLQ96FC7 376 aa22.03■■□□□ 1.12
LDB1-204ENST00000490751 SNURFLB1AK76 121 aa22.02■■□□□ 1.12
LDB1-204ENST00000490751 KLLNB2CW77 178 aa22.02■■□□□ 1.12
LDB1-204ENST00000490751 BTN1A1Q13410 526 aa22.02■■□□□ 1.12
LDB1-204ENST00000490751 LGALS9BQ3B8N2 356 aa22.02■■□□□ 1.12
LDB1-204ENST00000490751 C9orf47Q6ZRZ4 202 aa22.02■■□□□ 1.12
LDB1-204ENST00000490751 LINC00612Q8N6U2 182 aa22.02■■□□□ 1.12
LDB1-204ENST00000490751 LINC00336Q6ZUF6 198 aa22.01■■□□□ 1.11
LDB1-204ENST00000490751 FAT2Q9NYQ8 4349 aa22■■□□□ 1.11
LDB1-204ENST00000490751 CD300CQ08708 224 aa22■■□□□ 1.11
LDB1-204ENST00000490751 TMEM78Q5T7P6 136 aa22■■□□□ 1.11
LDB1-204ENST00000490751 ZNF503Q96F45 646 aa22■■□□□ 1.11
LDB1-204ENST00000490751 VGLL1Q99990 258 aa22■■□□□ 1.11
LDB1-204ENST00000490751 NUDT3O95989 172 aa21.99■■□□□ 1.11
LDB1-204ENST00000490751 CRISP2P16562 243 aa21.99■■□□□ 1.11
LDB1-204ENST00000490751 UBE2L3P68036 154 aaKnown RBP21.99■■□□□ 1.11
LDB1-204ENST00000490751 WFDC1Q9HC57 220 aa21.99■■□□□ 1.11
LDB1-204ENST00000490751 DNAH17Q9UFH2 4485 aa21.98■■□□□ 1.11
LDB1-204ENST00000490751 GAGE12BA1L429 117 aa21.98■■□□□ 1.11
LDB1-204ENST00000490751 ZNF324O75467 553 aaPredicted RBP21.98■■□□□ 1.11
LDB1-204ENST00000490751 GAGE7O76087 117 aa21.98■■□□□ 1.11
LDB1-204ENST00000490751 GAGE12FP0CL80 117 aa21.98■■□□□ 1.11
LDB1-204ENST00000490751 GAGE12GP0CL81 117 aa21.98■■□□□ 1.11
LDB1-204ENST00000490751 GAGE12IP0CL82 117 aa21.98■■□□□ 1.11
LDB1-204ENST00000490751 RNASE4P34096 147 aaKnown RBP21.98■■□□□ 1.11
LDB1-204ENST00000490751 ATG101Q9BSB4 218 aa21.98■■□□□ 1.11
LDB1-204ENST00000490751 PTTG1O95997 202 aa21.97■■□□□ 1.11
LDB1-204ENST00000490751 GPX1P07203 203 aa21.97■■□□□ 1.11
LDB1-204ENST00000490751 RANP62826 216 aaKnown RBP21.96■■□□□ 1.11
LDB1-204ENST00000490751 KHDC3LQ587J8 217 aa21.96■■□□□ 1.11
LDB1-204ENST00000490751 Q6ZR54 194 aa21.96■■□□□ 1.11
LDB1-204ENST00000490751 ZFAND2AQ8N6M9 145 aa21.96■■□□□ 1.11
LDB1-204ENST00000490751 ZNF492Q9P255 531 aa21.96■■□□□ 1.11
LDB1-204ENST00000490751 RTL8CO15255 209 aa21.95■■□□□ 1.1
LDB1-204ENST00000490751 NMBP08949 121 aa21.95■■□□□ 1.1
LDB1-204ENST00000490751 TAS2R45P59539 299 aa21.95■■□□□ 1.1
LDB1-204ENST00000490751 DAZ2Q13117 558 aaKnown RBP21.95■■□□□ 1.1
LDB1-204ENST00000490751 PRR9Q5T870 116 aa21.95■■□□□ 1.1
LDB1-204ENST00000490751 ZNF680Q8NEM1 530 aa21.95■■□□□ 1.1
LDB1-204ENST00000490751 LINC00467Q9BRT7 94 aa21.95■■□□□ 1.1
LDB1-204ENST00000490751 Q9H3A6 140 aa21.95■■□□□ 1.1
LDB1-204ENST00000490751 EIF3GO75821 320 aaKnown RBP eCLIP21.94■■□□□ 1.1
LDB1-204ENST00000490751 CSN1S1P47710 185 aa21.94■■□□□ 1.1
LDB1-204ENST00000490751 FAM3BP58499 235 aaPredicted RBP21.94■■□□□ 1.1
LDB1-204ENST00000490751 OR5I1Q13606 314 aa21.94■■□□□ 1.1
LDB1-204ENST00000490751 LYPD1Q8N2G4 141 aa21.94■■□□□ 1.1
LDB1-204ENST00000490751 EIF4E3Q8N5X7 224 aaKnown RBP21.94■■□□□ 1.1
LDB1-204ENST00000490751 GSN-AS1Q9NRJ2 163 aa21.94■■□□□ 1.1
LDB1-204ENST00000490751 ZNF138P52744 262 aa21.93■■□□□ 1.1
LDB1-204ENST00000490751 Q6ZTI0 123 aa21.93■■□□□ 1.1
LDB1-204ENST00000490751 C11orf72Q8NBR9 251 aa21.93■■□□□ 1.1
LDB1-204ENST00000490751 Q8TAT8 98 aa21.93■■□□□ 1.1
LDB1-204ENST00000490751 ANXA2RQ3ZCQ2 193 aa21.92■■□□□ 1.1
LDB1-204ENST00000490751 HOXA5P20719 270 aa21.91■■□□□ 1.1
LDB1-204ENST00000490751 ACOT6Q3I5F7 207 aaPredicted RBP21.91■■□□□ 1.1
LDB1-204ENST00000490751 MED28Q9H204 178 aa21.91■■□□□ 1.1
LDB1-204ENST00000490751 TRAV26-1A0A087WT03 109 aa21.9■■□□□ 1.1
LDB1-204ENST00000490751 PRSS29PA6NIE9 313 aa21.9■■□□□ 1.1
LDB1-204ENST00000490751 M6PRP20645 277 aa21.9■■□□□ 1.1
LDB1-204ENST00000490751 GNPNAT1Q96EK6 184 aaPredicted RBP21.9■■□□□ 1.1
LDB1-204ENST00000490751 RBAKDNA6NC62 111 aa21.89■■□□□ 1.09
LDB1-204ENST00000490751 RGS13O14921 159 aa21.89■■□□□ 1.09
LDB1-204ENST00000490751 CCL18P55774 89 aa21.89■■□□□ 1.09
LDB1-204ENST00000490751 Q6ZQT7 251 aa21.89■■□□□ 1.09
LDB1-204ENST00000490751 TMPRSS5Q9H3S3 457 aa21.89■■□□□ 1.09
LDB1-204ENST00000490751 TRBV7-9A0A0J9YWB2 115 aa21.88■■□□□ 1.09
LDB1-204ENST00000490751 A0A0J9YY99 117 aa21.88■■□□□ 1.09
LDB1-204ENST00000490751 A0A1B0GVY2 172 aa21.88■■□□□ 1.09
LDB1-204ENST00000490751 RAB2AP61019 212 aa21.88■■□□□ 1.09
LDB1-204ENST00000490751 A0A1W2PPV4 95 aa21.87■■□□□ 1.09
LDB1-204ENST00000490751 TP53TG3Q9ULZ0 132 aa21.87■■□□□ 1.09
LDB1-204ENST00000490751 LINC00588Q9Y4M8 146 aa21.87■■□□□ 1.09
LDB1-204ENST00000490751 KLF12Q9Y4X4 402 aa21.87■■□□□ 1.09
LDB1-204ENST00000490751 IGHV1OR15-1A0A075B7D0 117 aa21.86■■□□□ 1.09
LDB1-204ENST00000490751 TRGV1A0A0A0MS02 117 aa21.86■■□□□ 1.09
LDB1-204ENST00000490751 DIRC3C9JPN6 131 aa21.86■■□□□ 1.09
LDB1-204ENST00000490751 TCL1AP56279 114 aa21.86■■□□□ 1.09
LDB1-204ENST00000490751 ZNRF2Q8NHG8 242 aa21.86■■□□□ 1.09
LDB1-204ENST00000490751 RXFP4Q8TDU9 374 aa21.86■■□□□ 1.09
LDB1-204ENST00000490751 TRGV2A0A075B6R0 118 aa21.85■■□□□ 1.09
LDB1-204ENST00000490751 IBA57Q5T440 356 aaKnown RBP21.85■■□□□ 1.09
LDB1-204ENST00000490751 PQLC2Q6ZP29 291 aa21.85■■□□□ 1.09
LDB1-204ENST00000490751 HYLS1Q96M11 299 aa21.85■■□□□ 1.09
LDB1-204ENST00000490751 OTORQ9NRC9 128 aa21.85■■□□□ 1.09
LDB1-204ENST00000490751 ZNF266Q14584 549 aa21.84■■□□□ 1.09
LDB1-204ENST00000490751 SOHLH1Q5JUK2 328 aa21.84■■□□□ 1.09
LDB1-204ENST00000490751 OR10G4Q8NGN3 311 aa21.84■■□□□ 1.09
LDB1-204ENST00000490751 OR10G9Q8NGN4 311 aa21.84■■□□□ 1.09
LDB1-204ENST00000490751 OR10G7Q8NGN6 311 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms