RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 PTPRQQ9UMZ3 2332 aa10.2□□□□□ -0.78
SHOX2-205ENST00000490689 GAGE12HA6NDE8 117 aa10.2□□□□□ -0.78
SHOX2-205ENST00000490689 APOBEC3AP31941 199 aaPredicted RBP10.2□□□□□ -0.78
SHOX2-205ENST00000490689 DGAT2L7PQ6IED9 249 aa10.2□□□□□ -0.78
SHOX2-205ENST00000490689 NDPQ00604 133 aa10.2□□□□□ -0.78
SHOX2-205ENST00000490689 THAP8Q8NA92 274 aa10.2□□□□□ -0.78
SHOX2-205ENST00000490689 KIR2DL4Q99706 377 aa10.2□□□□□ -0.78
SHOX2-205ENST00000490689 SPRY2O43597 315 aa10.2□□□□□ -0.78
SHOX2-205ENST00000490689 RNASE4P34096 147 aaKnown RBP10.2□□□□□ -0.78
SHOX2-205ENST00000490689 FXYD2P54710 66 aa10.2□□□□□ -0.78
SHOX2-205ENST00000490689 TNRC6AQ8NDV7 1962 aaKnown RBP10.2□□□□□ -0.78
SHOX2-205ENST00000490689 BUB1B-PAK6H3BSN5 160 aa10.19□□□□□ -0.78
SHOX2-205ENST00000490689 SPINK8P0C7L1 97 aa10.19□□□□□ -0.78
SHOX2-205ENST00000490689 VGLL1Q99990 258 aa10.19□□□□□ -0.78
SHOX2-205ENST00000490689 WFDC2Q14508 124 aa10.19□□□□□ -0.78
SHOX2-205ENST00000490689 MBD6Q96DN6 1003 aa10.19□□□□□ -0.78
SHOX2-205ENST00000490689 C1orf159Q96HA4 380 aa10.19□□□□□ -0.78
SHOX2-205ENST00000490689 ANAPC13Q9BS18 74 aa10.19□□□□□ -0.78
SHOX2-205ENST00000490689 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.19□□□□□ -0.78
SHOX2-205ENST00000490689 B9A039 149 aa10.19□□□□□ -0.78
SHOX2-205ENST00000490689 CCL21O00585 134 aa10.19□□□□□ -0.78
SHOX2-205ENST00000490689 SNCGO76070 127 aa10.19□□□□□ -0.78
SHOX2-205ENST00000490689 IGHV3-11P01762 117 aa10.19□□□□□ -0.78
SHOX2-205ENST00000490689 GP9P14770 177 aa10.19□□□□□ -0.78
SHOX2-205ENST00000490689 ZNF56Q15929 161 aa10.19□□□□□ -0.78
SHOX2-205ENST00000490689 PSMG4Q5JS54 123 aa10.19□□□□□ -0.78
SHOX2-205ENST00000490689 C14orf178Q8N769 122 aaPredicted RBP10.19□□□□□ -0.78
SHOX2-205ENST00000490689 C15orf32Q32M92 178 aa10.18□□□□□ -0.78
SHOX2-205ENST00000490689 ASIPP42127 132 aa10.18□□□□□ -0.78
SHOX2-205ENST00000490689 LY6EQ16553 131 aa10.18□□□□□ -0.78
SHOX2-205ENST00000490689 PRR25Q96S07 402 aa10.18□□□□□ -0.78
SHOX2-205ENST00000490689 IGHV4-39P01824 125 aa10.18□□□□□ -0.78
SHOX2-205ENST00000490689 FAM57AQ8TBR7 257 aa10.18□□□□□ -0.78
SHOX2-205ENST00000490689 NPFFR1Q9GZQ6 430 aa10.18□□□□□ -0.78
SHOX2-205ENST00000490689 FAM208BQ5VWN6 2430 aa10.18□□□□□ -0.78
SHOX2-205ENST00000490689 A0A1B0GXF2 115 aa10.18□□□□□ -0.78
SHOX2-205ENST00000490689 SRD5A1P18405 259 aa10.18□□□□□ -0.78
SHOX2-205ENST00000490689 LOXP28300 417 aaPredicted RBP10.18□□□□□ -0.78
SHOX2-205ENST00000490689 SMPXQ9UHP9 88 aa10.18□□□□□ -0.78
SHOX2-205ENST00000490689 VPS13AQ96RL7 3174 aa10.17□□□□□ -0.78
SHOX2-205ENST00000490689 PSMB11A5LHX3 300 aa10.17□□□□□ -0.78
SHOX2-205ENST00000490689 EGR2P11161 476 aaPredicted RBP10.17□□□□□ -0.78
SHOX2-205ENST00000490689 C1orf122Q6ZSJ8 110 aa10.17□□□□□ -0.78
SHOX2-205ENST00000490689 SPEGQ15772 3267 aa10.17□□□□□ -0.78
SHOX2-205ENST00000490689 TRAV2A0A0B4J234 112 aa10.17□□□□□ -0.78
SHOX2-205ENST00000490689 MBD3L4A6NDZ8 208 aaPredicted RBP10.17□□□□□ -0.78
SHOX2-205ENST00000490689 MBD3L3A6NE82 208 aaPredicted RBP10.17□□□□□ -0.78
SHOX2-205ENST00000490689 MBD3L5A6NJ08 208 aaPredicted RBP10.17□□□□□ -0.78
SHOX2-205ENST00000490689 VWC2LB2RUY7 222 aa10.17□□□□□ -0.78
SHOX2-205ENST00000490689 LYPD1Q8N2G4 141 aa10.17□□□□□ -0.78
SHOX2-205ENST00000490689 MBD3L2Q8NHZ7 208 aaPredicted RBP10.17□□□□□ -0.78
SHOX2-205ENST00000490689 IGLV3-9A0A075B6K5 115 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 TRBV25-1A0A075B6N4 114 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 LINC01549A6NIU2 74 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 GATA4P43694 442 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 FAM159AQ6UWV7 190 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 SYT8Q8NBV8 401 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 RAX2Q96IS3 184 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 CEP295Q9C0D2 2601 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 MYO9AB2RTY4 2548 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 A8MWV9 139 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 RAB9AP51151 201 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 ATP5G2Q06055 141 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 IL17RELQ6ZVW7 336 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 TEX29Q8N6K0 151 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 ABHD17AQ96GS6 310 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 ACACBO00763 2458 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 CACNA1AO00555 2505 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 IGKV1D-37A0A075B6S9 117 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 TRGV3P03979 118 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 TMEM155Q4W5P6 130 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 ZNF562Q6V9R5 426 aa10.16□□□□□ -0.78
SHOX2-205ENST00000490689 IGKV1-17P01599 117 aa10.15□□□□□ -0.78
SHOX2-205ENST00000490689 ZNF491Q8N8L2 437 aa10.15□□□□□ -0.78
SHOX2-205ENST00000490689 DLX4Q92988 240 aaPredicted RBP10.15□□□□□ -0.78
SHOX2-205ENST00000490689 LHBP01229 141 aa10.15□□□□□ -0.78
SHOX2-205ENST00000490689 C5orf64Q2M2E5 130 aa10.15□□□□□ -0.78
SHOX2-205ENST00000490689 EEF1AKMT3Q96AZ1 226 aa10.15□□□□□ -0.78
SHOX2-205ENST00000490689 KLF12Q9Y4X4 402 aa10.15□□□□□ -0.78
SHOX2-205ENST00000490689 H7C1H1 209 aa10.15□□□□□ -0.78
SHOX2-205ENST00000490689 COX6CP09669 75 aa10.15□□□□□ -0.78
SHOX2-205ENST00000490689 GEMIN7Q9H840 131 aaKnown RBP10.15□□□□□ -0.78
SHOX2-205ENST00000490689 NCKAP5O14513 1909 aa10.15□□□□□ -0.78
SHOX2-205ENST00000490689 ORMDL2Q53FV1 153 aa10.15□□□□□ -0.79
SHOX2-205ENST00000490689 DTX2Q86UW9 622 aa10.15□□□□□ -0.79
SHOX2-205ENST00000490689 ARHGAP32A7KAX9 2087 aa10.14□□□□□ -0.79
SHOX2-205ENST00000490689 A0A1W2PNU3 283 aaPredicted RBP10.14□□□□□ -0.79
SHOX2-205ENST00000490689 C3orf36Q3SXR2 165 aa10.14□□□□□ -0.79
SHOX2-205ENST00000490689 NEGR1Q7Z3B1 354 aa10.14□□□□□ -0.79
SHOX2-205ENST00000490689 CEND1Q8N111 149 aa10.14□□□□□ -0.79
SHOX2-205ENST00000490689 SRSF8Q9BRL6 282 aaKnown RBP10.14□□□□□ -0.79
SHOX2-205ENST00000490689 LRP4O75096 1905 aa10.14□□□□□ -0.79
SHOX2-205ENST00000490689 C19orf71A6NCJ1 209 aa10.14□□□□□ -0.79
SHOX2-205ENST00000490689 PLNP26678 52 aa10.14□□□□□ -0.79
SHOX2-205ENST00000490689 CTSZQ9UBR2 303 aa10.14□□□□□ -0.79
SHOX2-205ENST00000490689 SLC25A16P16260 332 aa10.14□□□□□ -0.79
SHOX2-205ENST00000490689 C12orf74Q32Q52 190 aa10.14□□□□□ -0.79
SHOX2-205ENST00000490689 A0A0G2JNJ9 132 aa10.13□□□□□ -0.79
SHOX2-205ENST00000490689 G3V4G9 280 aa10.13□□□□□ -0.79
SHOX2-205ENST00000490689 BOD1L2Q8IYS8 172 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms