RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 LINC00336Q6ZUF6 198 aa7.49□□□□□ -1.21
TTC28-207ENST00000490475 CSNK1G2-AS1Q8NCQ2 148 aa7.49□□□□□ -1.21
TTC28-207ENST00000490475 OR2G3Q8NGZ4 309 aa7.49□□□□□ -1.21
TTC28-207ENST00000490475 FAM210BQ96KR6 192 aa7.49□□□□□ -1.21
TTC28-207ENST00000490475 C16orf92Q96LL3 132 aa7.49□□□□□ -1.21
TTC28-207ENST00000490475 C20orf173Q96LM9 149 aa7.49□□□□□ -1.21
TTC28-207ENST00000490475 YPEL4Q96NS1 127 aa7.49□□□□□ -1.21
TTC28-207ENST00000490475 ATP5SQ99766 215 aa7.49□□□□□ -1.21
TTC28-207ENST00000490475 NPCDR1Q9BY65 106 aa7.49□□□□□ -1.21
TTC28-207ENST00000490475 OR51M1Q9H341 326 aa7.49□□□□□ -1.21
TTC28-207ENST00000490475 HLA-DRB4X5D2U9 266 aa7.49□□□□□ -1.21
TTC28-207ENST00000490475 X6R8D5 127 aa7.49□□□□□ -1.21
TTC28-207ENST00000490475 IGHV4-4A0A075B6R2 117 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 ELOA3CA0A087WX78 387 aaPredicted RBP7.48□□□□□ -1.21
TTC28-207ENST00000490475 H3BMM0 161 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 MPDU1O75352 247 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 IFNA5P01569 189 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 AMBPP02760 352 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 P0DMU3 169 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 FAM231AP0DMU4 169 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 FAM231CP0DMU5 169 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 RPL7P18124 248 aaKnown RBP7.48□□□□□ -1.21
TTC28-207ENST00000490475 ATP6V0CP27449 155 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 PSMB3P49720 205 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 SNRPEP62304 92 aaKnown RBP7.48□□□□□ -1.21
TTC28-207ENST00000490475 GCSAMLQ5JQS6 135 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 AKR1C8PQ5T2L2 129 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 GDF5OSQ5U4N7 250 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 Q6ZTC4 211 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 S100A7AQ86SG5 101 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 FAM213BQ8TBF2 198 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 TVP23CQ96ET8 276 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 GPR82Q96P67 336 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 NIPSNAP3BQ9BS92 247 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 NDUFAF3Q9BU61 184 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 WDR61Q9GZS3 305 aaKnown RBP7.48□□□□□ -1.21
TTC28-207ENST00000490475 CTDSP1Q9GZU7 261 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 PXMP4Q9Y6I8 212 aa7.48□□□□□ -1.21
TTC28-207ENST00000490475 DEFB131BA0A096LNP1 70 aa7.47□□□□□ -1.21
TTC28-207ENST00000490475 TRAV8-2A0A0B4J237 113 aa7.47□□□□□ -1.21
TTC28-207ENST00000490475 F6UB75 175 aa7.47□□□□□ -1.21
TTC28-207ENST00000490475 ISLRO14498 428 aa7.47□□□□□ -1.21
TTC28-207ENST00000490475 MRPS12O15235 138 aaKnown RBP7.47□□□□□ -1.21
TTC28-207ENST00000490475 SRP19P09132 144 aaKnown RBP7.47□□□□□ -1.21
TTC28-207ENST00000490475 SPART-AS1P0CW21 52 aa7.47□□□□□ -1.21
TTC28-207ENST00000490475 HOXA5P20719 270 aa7.47□□□□□ -1.21
TTC28-207ENST00000490475 FOXI2Q6ZQN5 318 aa7.47□□□□□ -1.21
TTC28-207ENST00000490475 RNF182Q8N6D2 247 aa7.47□□□□□ -1.21
TTC28-207ENST00000490475 HSD17B11Q8NBQ5 300 aa7.47□□□□□ -1.21
TTC28-207ENST00000490475 OR1L4Q8NGR5 311 aa7.47□□□□□ -1.21
TTC28-207ENST00000490475 MBD3L1Q8WWY6 194 aa7.47□□□□□ -1.21
TTC28-207ENST00000490475 XCL2Q9UBD3 114 aa7.47□□□□□ -1.21
TTC28-207ENST00000490475 TIMM9Q9Y5J7 89 aa7.47□□□□□ -1.21
TTC28-207ENST00000490475 RFNGQ9Y644 331 aa7.47□□□□□ -1.21
TTC28-207ENST00000490475 KMT2AQ03164 3969 aa7.46□□□□□ -1.22
TTC28-207ENST00000490475 PCP4L1A6NKN8 68 aa7.46□□□□□ -1.22
TTC28-207ENST00000490475 H3BQ15 152 aa7.46□□□□□ -1.22
TTC28-207ENST00000490475 H3BTX0 84 aa7.46□□□□□ -1.22
TTC28-207ENST00000490475 IFNA1P01562 189 aa7.46□□□□□ -1.22
TTC28-207ENST00000490475 IGKV3-20P01619 116 aa7.46□□□□□ -1.22
TTC28-207ENST00000490475 PRB4P10163 310 aaPredicted RBP7.46□□□□□ -1.22
TTC28-207ENST00000490475 FABP9Q0Z7S8 132 aa7.46□□□□□ -1.22
TTC28-207ENST00000490475 EBLN2Q6P2I7 272 aa7.46□□□□□ -1.22
TTC28-207ENST00000490475 ZNF705AQ6ZN79 300 aaPredicted RBP7.46□□□□□ -1.22
TTC28-207ENST00000490475 ZNF709Q8N972 641 aa7.46□□□□□ -1.22
TTC28-207ENST00000490475 BTF3L4Q96K17 158 aa7.46□□□□□ -1.22
TTC28-207ENST00000490475 CLEC5AQ9NY25 188 aa7.46□□□□□ -1.22
TTC28-207ENST00000490475 A0A087X0K7 114 aa7.45□□□□□ -1.22
TTC28-207ENST00000490475 ZNF705FA8MVS1 300 aaPredicted RBP7.45□□□□□ -1.22
TTC28-207ENST00000490475 MBP02144 154 aa7.45□□□□□ -1.22
TTC28-207ENST00000490475 ZNF705DP0CH99 300 aaPredicted RBP7.45□□□□□ -1.22
TTC28-207ENST00000490475 ZNF705BP0CI00 300 aaPredicted RBP7.45□□□□□ -1.22
TTC28-207ENST00000490475 BPIFA4PQ86YQ2 179 aa7.45□□□□□ -1.22
TTC28-207ENST00000490475 SCGB1C1Q8TD33 95 aa7.45□□□□□ -1.22
TTC28-207ENST00000490475 PFDN5Q99471 154 aa7.45□□□□□ -1.22
TTC28-207ENST00000490475 SH3BGRL3Q9H299 93 aa7.45□□□□□ -1.22
TTC28-207ENST00000490475 RPRMQ9NS64 109 aa7.45□□□□□ -1.22
TTC28-207ENST00000490475 RNF24Q9Y225 148 aa7.45□□□□□ -1.22
TTC28-207ENST00000490475 GOLT1BQ9Y3E0 138 aa7.45□□□□□ -1.22
TTC28-207ENST00000490475 TRBV24-1A0A075B6N3 115 aa7.44□□□□□ -1.22
TTC28-207ENST00000490475 A0A0J9YX75 114 aa7.44□□□□□ -1.22
TTC28-207ENST00000490475 LOC102723971A0A1B0GUV8 181 aa7.44□□□□□ -1.22
TTC28-207ENST00000490475 C17orf112F2Z3M2 114 aa7.44□□□□□ -1.22
TTC28-207ENST00000490475 IGLC2P0DOY2 106 aa7.44□□□□□ -1.22
TTC28-207ENST00000490475 S100A2P29034 98 aa7.44□□□□□ -1.22
TTC28-207ENST00000490475 FXYD7P58549 80 aa7.44□□□□□ -1.22
TTC28-207ENST00000490475 ICAM4Q14773 271 aa7.44□□□□□ -1.22
TTC28-207ENST00000490475 C12orf74Q32Q52 190 aa7.44□□□□□ -1.22
TTC28-207ENST00000490475 FAM78BQ5VT40 261 aa7.44□□□□□ -1.22
TTC28-207ENST00000490475 MIR17HGQ75NE6 70 aa7.44□□□□□ -1.22
TTC28-207ENST00000490475 ZFP82Q8N141 532 aa7.44□□□□□ -1.22
TTC28-207ENST00000490475 POM121L12Q8N7R1 296 aa7.44□□□□□ -1.22
TTC28-207ENST00000490475 OR4B1Q8NGF8 309 aa7.44□□□□□ -1.22
TTC28-207ENST00000490475 GSN-AS1Q9NRJ2 163 aa7.44□□□□□ -1.22
TTC28-207ENST00000490475 SLC17A3O00476 420 aa7.43□□□□□ -1.22
TTC28-207ENST00000490475 PYYP10082 97 aa7.43□□□□□ -1.22
TTC28-207ENST00000490475 BCL2P10415 239 aa7.43□□□□□ -1.22
TTC28-207ENST00000490475 FHITP49789 147 aa7.43□□□□□ -1.22
TTC28-207ENST00000490475 PSG9Q00887 426 aa7.43□□□□□ -1.22
TTC28-207ENST00000490475 ELOBQ15370 118 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms