RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 HES1Q14469 280 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 SLC48A1Q6P1K1 146 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 C2orf91Q6ZV80 131 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 PPDPFLQ8WWR9 84 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 TMEM222Q9H0R3 208 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 TAC3Q9UHF0 121 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 RABAC1Q9UI14 185 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 REV3LO60673 3130 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 FREM3P0C091 2139 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 CACNA1DQ01668 2161 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 SHANK1Q9Y566 2161 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 TINCRA0A1B0GVN0 87 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 MOSP00540 346 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 SLC25A5P05141 298 aaKnown RBP2.01□□□□□ -2.09
UBXN4-208ENST00000490163 QRFPP83859 136 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 EIF3IQ13347 325 aaKnown RBP2.01□□□□□ -2.09
UBXN4-208ENST00000490163 LYRM7Q5U5X0 104 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 RAB42Q8N4Z0 105 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 RPP25LQ8N5L8 163 aaKnown RBP2.01□□□□□ -2.09
UBXN4-208ENST00000490163 H1FXQ92522 213 aaKnown RBP2.01□□□□□ -2.09
UBXN4-208ENST00000490163 GPX7Q96SL4 187 aaPredicted RBP2.01□□□□□ -2.09
UBXN4-208ENST00000490163 TMEM147Q9BVK8 224 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 C11orf1Q9H5F2 150 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 TNFRSF19Q9NS68 423 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 ARHGAP21Q5T5U3 1957 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 BPTFQ12830 3046 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 EXPH5Q8NEV8 1989 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 H3BMG7 143 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 LMX1BO60663 402 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 IGHV3-13P01766 116 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 CECR9P0C854 216 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 CSN1S1P47710 185 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 SPANXN5Q5MJ07 72 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 IBA57Q5T440 356 aaKnown RBP2.01□□□□□ -2.09
UBXN4-208ENST00000490163 TMEM78Q5T7P6 136 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 RASL11AQ6T310 242 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 ZCCHC24Q8N2G6 241 aaKnown RBP2.01□□□□□ -2.09
UBXN4-208ENST00000490163 CHCHD1Q96BP2 118 aaKnown RBP2.01□□□□□ -2.09
UBXN4-208ENST00000490163 PLA2G2FQ9BZM2 168 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 FAM60AQ9NP50 221 aa2.01□□□□□ -2.09
UBXN4-208ENST00000490163 NHP2Q9NX24 153 aaKnown RBP2.01□□□□□ -2.09
UBXN4-208ENST00000490163 IGHV3-74A0A0B4J1X5 117 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 IZUMO1RA6ND01 250 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 SHISA9B4DS77 424 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 SYNGR2O43760 224 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 ASAH2BP0C7U1 165 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 NPPCP23582 126 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 SPINT3P49223 89 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 INSL3P51460 131 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 PSG7Q13046 419 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 ACP7Q6ZNF0 438 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 C6orf201Q7Z4U5 140 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 C10orf126Q8N4M7 172 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 ZNF645Q8N7E2 425 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 DCAF4L2Q8NA75 395 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 OR1L8Q8NGR8 309 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 HSD17B10Q99714 261 aaKnown RBP2□□□□□ -2.09
UBXN4-208ENST00000490163 OSTCQ9NRP0 149 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 LY96Q9Y6Y9 160 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 DYSFO75923 2080 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 NCOA6Q14686 2063 aaPredicted RBP2□□□□□ -2.09
UBXN4-208ENST00000490163 IGLV7-46A0A075B6I9 117 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 C9JAW5 83 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 C9JCJ5 164 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 SRSF10O75494 262 aaKnown RBP2□□□□□ -2.09
UBXN4-208ENST00000490163 IGKV1D-33P01593 117 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 IGKV1-33P01594 117 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 STATHP02808 62 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 PEBP1P30086 187 aaKnown RBP2□□□□□ -2.09
UBXN4-208ENST00000490163 NMUP48645 174 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 PPP1CAP62136 330 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 RPL18Q07020 188 aaKnown RBP2□□□□□ -2.09
UBXN4-208ENST00000490163 FXYD3Q14802 87 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 NMSQ5H8A3 153 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 C9orf153Q5TBE3 101 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 OR51H1Q8NH63 302 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 WFDC5Q8TCV5 224 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 HDHD3Q9BSH5 251 aaPredicted RBP2□□□□□ -2.09
UBXN4-208ENST00000490163 HIGD1AQ9Y241 93 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 CPAMD8Q8IZJ3 1885 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 BRCA2P51587 3418 aa2□□□□□ -2.09
UBXN4-208ENST00000490163 IGHV3-64DA0A0J9YX35 117 aa1.99□□□□□ -2.09
UBXN4-208ENST00000490163 K7EQS6 105 aa1.99□□□□□ -2.09
UBXN4-208ENST00000490163 K7ERJ3 54 aa1.99□□□□□ -2.09
UBXN4-208ENST00000490163 PPYP01298 95 aa1.99□□□□□ -2.09
UBXN4-208ENST00000490163 ZNF688P0C7X2 276 aa1.99□□□□□ -2.09
UBXN4-208ENST00000490163 RPL7P18124 248 aaKnown RBP1.99□□□□□ -2.09
UBXN4-208ENST00000490163 OPRK1P41145 380 aa1.99□□□□□ -2.09
UBXN4-208ENST00000490163 AMTNQ6UX39 209 aa1.99□□□□□ -2.09
UBXN4-208ENST00000490163 DGAT2L6Q6ZPD8 337 aa1.99□□□□□ -2.09
UBXN4-208ENST00000490163 LYPD6Q86Y78 171 aa1.99□□□□□ -2.09
UBXN4-208ENST00000490163 OSR2Q8N2R0 312 aa1.99□□□□□ -2.09
UBXN4-208ENST00000490163 LRRC29Q8WV35 223 aa1.99□□□□□ -2.09
UBXN4-208ENST00000490163 FMC1Q96HJ9 113 aa1.99□□□□□ -2.09
UBXN4-208ENST00000490163 CDX2Q99626 313 aaPredicted RBP1.99□□□□□ -2.09
UBXN4-208ENST00000490163 OR2H1Q9GZK4 316 aa1.99□□□□□ -2.09
UBXN4-208ENST00000490163 PBOV1Q9GZY1 135 aa1.99□□□□□ -2.09
UBXN4-208ENST00000490163 FBXL15Q9H469 300 aa1.99□□□□□ -2.09
UBXN4-208ENST00000490163 SPANXCQ9NY87 97 aa1.99□□□□□ -2.09
UBXN4-208ENST00000490163 CACNG5Q9UF02 275 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms