RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 C6orf223Q8N319 242 aa13.46□□□□□ -0.25
TNFRSF1B-202ENST00000489921 GNPNAT1Q96EK6 184 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF1B-202ENST00000489921 ZNF503Q96F45 646 aa13.46□□□□□ -0.25
TNFRSF1B-202ENST00000489921 A0A0J9YY99 117 aa13.45□□□□□ -0.26
TNFRSF1B-202ENST00000489921 SNURFLB1AK76 121 aa13.45□□□□□ -0.26
TNFRSF1B-202ENST00000489921 H0YIZ8 118 aa13.45□□□□□ -0.26
TNFRSF1B-202ENST00000489921 MPDU1O75352 247 aa13.45□□□□□ -0.26
TNFRSF1B-202ENST00000489921 RLN2P04090 185 aa13.45□□□□□ -0.26
TNFRSF1B-202ENST00000489921 SLC25A5P05141 298 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1B-202ENST00000489921 IFITM3Q01628 133 aa13.45□□□□□ -0.26
TNFRSF1B-202ENST00000489921 MZT2BQ6NZ67 158 aa13.45□□□□□ -0.26
TNFRSF1B-202ENST00000489921 THAP6Q8TBB0 222 aa13.45□□□□□ -0.26
TNFRSF1B-202ENST00000489921 KRTAP1-5Q9BYS1 174 aa13.45□□□□□ -0.26
TNFRSF1B-202ENST00000489921 Q9H8V8 135 aa13.45□□□□□ -0.26
TNFRSF1B-202ENST00000489921 OR5AC2Q9NZP5 309 aa13.45□□□□□ -0.26
TNFRSF1B-202ENST00000489921 DNAH5Q8TE73 4624 aa13.44□□□□□ -0.26
TNFRSF1B-202ENST00000489921 APOBP04114 4563 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1B-202ENST00000489921 C7orf71A4D174 169 aa13.44□□□□□ -0.26
TNFRSF1B-202ENST00000489921 BTN1A1Q13410 526 aa13.44□□□□□ -0.26
TNFRSF1B-202ENST00000489921 ESRGQ1W209 222 aa13.44□□□□□ -0.26
TNFRSF1B-202ENST00000489921 Q6ZQT7 251 aa13.44□□□□□ -0.26
TNFRSF1B-202ENST00000489921 OR5C1Q8NGR4 320 aa13.44□□□□□ -0.26
TNFRSF1B-202ENST00000489921 BLNKQ8WV28 456 aa13.44□□□□□ -0.26
TNFRSF1B-202ENST00000489921 LINC00477Q96M19 166 aa13.44□□□□□ -0.26
TNFRSF1B-202ENST00000489921 LINC00467Q9BRT7 94 aa13.44□□□□□ -0.26
TNFRSF1B-202ENST00000489921 TMPRSS5Q9H3S3 457 aa13.44□□□□□ -0.26
TNFRSF1B-202ENST00000489921 GSN-AS1Q9NRJ2 163 aa13.44□□□□□ -0.26
TNFRSF1B-202ENST00000489921 PRELID1Q9Y255 219 aa13.44□□□□□ -0.26
TNFRSF1B-202ENST00000489921 H3BNG1 76 aa13.43□□□□□ -0.26
TNFRSF1B-202ENST00000489921 CRISP2P16562 243 aa13.43□□□□□ -0.26
TNFRSF1B-202ENST00000489921 CLINT1Q14677 625 aa13.43□□□□□ -0.26
TNFRSF1B-202ENST00000489921 PRR9Q5T870 116 aa13.43□□□□□ -0.26
TNFRSF1B-202ENST00000489921 C9orf47Q6ZRZ4 202 aa13.43□□□□□ -0.26
TNFRSF1B-202ENST00000489921 MIR17HGQ75NE6 70 aa13.43□□□□□ -0.26
TNFRSF1B-202ENST00000489921 VSIG2Q96IQ7 327 aa13.43□□□□□ -0.26
TNFRSF1B-202ENST00000489921 VGLL1Q99990 258 aa13.43□□□□□ -0.26
TNFRSF1B-202ENST00000489921 KRTAP4-5Q9BYR2 181 aa13.43□□□□□ -0.26
TNFRSF1B-202ENST00000489921 TIMM9Q9Y5J7 89 aa13.43□□□□□ -0.26
TNFRSF1B-202ENST00000489921 ICAM4Q14773 271 aa13.42□□□□□ -0.26
TNFRSF1B-202ENST00000489921 ANXA2RQ3ZCQ2 193 aa13.42□□□□□ -0.26
TNFRSF1B-202ENST00000489921 ZFAND2AQ8N6M9 145 aa13.42□□□□□ -0.26
TNFRSF1B-202ENST00000489921 S100ZQ8WXG8 99 aa13.42□□□□□ -0.26
TNFRSF1B-202ENST00000489921 C18orf15Q96N68 181 aa13.42□□□□□ -0.26
TNFRSF1B-202ENST00000489921 UPK3BQ9BT76 320 aa13.42□□□□□ -0.26
TNFRSF1B-202ENST00000489921 NMES1Q9C002 83 aa13.42□□□□□ -0.26
TNFRSF1B-202ENST00000489921 IGKV2-40A0A087WW87 121 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1B-202ENST00000489921 E5RGE8 158 aa13.41□□□□□ -0.26
TNFRSF1B-202ENST00000489921 IGKV2D-40P01614 121 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1B-202ENST00000489921 RNASE4P34096 147 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1B-202ENST00000489921 FXYD5Q96DB9 178 aa13.41□□□□□ -0.26
TNFRSF1B-202ENST00000489921 KLF12Q9Y4X4 402 aa13.41□□□□□ -0.26
TNFRSF1B-202ENST00000489921 UPK1BO75841 260 aa13.4□□□□□ -0.26
TNFRSF1B-202ENST00000489921 NBEAP1P0C6P0 100 aa13.4□□□□□ -0.26
TNFRSF1B-202ENST00000489921 FAM122CQ6P4D5 195 aa13.4□□□□□ -0.26
TNFRSF1B-202ENST00000489921 EIF4E3Q8N5X7 224 aaKnown RBP13.4□□□□□ -0.26
TNFRSF1B-202ENST00000489921 WDR61Q9GZS3 305 aaKnown RBP13.4□□□□□ -0.26
TNFRSF1B-202ENST00000489921 TP53TG3Q9ULZ0 132 aa13.4□□□□□ -0.26
TNFRSF1B-202ENST00000489921 A0A096LPF7 62 aa13.39□□□□□ -0.27
TNFRSF1B-202ENST00000489921 SPINK4O60575 86 aa13.39□□□□□ -0.27
TNFRSF1B-202ENST00000489921 NMBP08949 121 aa13.39□□□□□ -0.27
TNFRSF1B-202ENST00000489921 H2BFSP57053 126 aa13.39□□□□□ -0.27
TNFRSF1B-202ENST00000489921 LRRC37A5PQ49AS3 106 aa13.39□□□□□ -0.27
TNFRSF1B-202ENST00000489921 ZNF680Q8NEM1 530 aa13.39□□□□□ -0.27
TNFRSF1B-202ENST00000489921 SLC25A31Q9H0C2 315 aa13.39□□□□□ -0.27
TNFRSF1B-202ENST00000489921 OR51M1Q9H341 326 aa13.39□□□□□ -0.27
TNFRSF1B-202ENST00000489921 Q9H3A6 140 aa13.39□□□□□ -0.27
TNFRSF1B-202ENST00000489921 ZNF492Q9P255 531 aa13.39□□□□□ -0.27
TNFRSF1B-202ENST00000489921 GPX1P07203 203 aa13.38□□□□□ -0.27
TNFRSF1B-202ENST00000489921 TCL1AP56279 114 aa13.38□□□□□ -0.27
TNFRSF1B-202ENST00000489921 ENKURQ8TC29 256 aa13.38□□□□□ -0.27
TNFRSF1B-202ENST00000489921 PHYHIPLQ96FC7 376 aa13.38□□□□□ -0.27
TNFRSF1B-202ENST00000489921 AAMDCQ9H7C9 122 aa13.38□□□□□ -0.27
TNFRSF1B-202ENST00000489921 MRPS16Q9Y3D3 137 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1B-202ENST00000489921 OR10J4P0C629 311 aa13.37□□□□□ -0.27
TNFRSF1B-202ENST00000489921 PAXXQ9BUH6 204 aa13.37□□□□□ -0.27
TNFRSF1B-202ENST00000489921 FUT9Q9Y231 359 aa13.37□□□□□ -0.27
TNFRSF1B-202ENST00000489921 TRGV2A0A075B6R0 118 aa13.36□□□□□ -0.27
TNFRSF1B-202ENST00000489921 TRGV1A0A0A0MS02 117 aa13.36□□□□□ -0.27
TNFRSF1B-202ENST00000489921 C16orf90A8MZG2 172 aa13.36□□□□□ -0.27
TNFRSF1B-202ENST00000489921 TMEM78Q5T7P6 136 aa13.36□□□□□ -0.27
TNFRSF1B-202ENST00000489921 MRPL32Q9BYC8 188 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1B-202ENST00000489921 A6NHS1 94 aa13.35□□□□□ -0.27
TNFRSF1B-202ENST00000489921 INMT-MINDY4F8WBC2 141 aa13.35□□□□□ -0.27
TNFRSF1B-202ENST00000489921 PRAF2O60831 178 aa13.35□□□□□ -0.27
TNFRSF1B-202ENST00000489921 IBA57Q5T440 356 aaKnown RBP13.35□□□□□ -0.27
TNFRSF1B-202ENST00000489921 Q8TAT8 98 aa13.35□□□□□ -0.27
TNFRSF1B-202ENST00000489921 PPP1R1CQ8WVI7 109 aa13.35□□□□□ -0.27
TNFRSF1B-202ENST00000489921 MARVELD1Q9BSK0 173 aa13.35□□□□□ -0.27
TNFRSF1B-202ENST00000489921 IGHV1OR15-1A0A075B7D0 117 aa13.34□□□□□ -0.27
TNFRSF1B-202ENST00000489921 A0A1W2PPQ1 181 aa13.34□□□□□ -0.27
TNFRSF1B-202ENST00000489921 ZNF138P52744 262 aa13.34□□□□□ -0.27
TNFRSF1B-202ENST00000489921 CYCSP99999 105 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1B-202ENST00000489921 TRBV7-9A0A0J9YWB2 115 aa13.33□□□□□ -0.28
TNFRSF1B-202ENST00000489921 CDK2AP2O75956 126 aa13.33□□□□□ -0.28
TNFRSF1B-202ENST00000489921 ST6GAL2Q96JF0 529 aa13.33□□□□□ -0.28
TNFRSF1B-202ENST00000489921 ATP5SQ99766 215 aa13.33□□□□□ -0.28
TNFRSF1B-202ENST00000489921 RGS13O14921 159 aa13.32□□□□□ -0.28
TNFRSF1B-202ENST00000489921 RANP62826 216 aaKnown RBP13.32□□□□□ -0.28
TNFRSF1B-202ENST00000489921 TTC32Q5I0X7 151 aa13.32□□□□□ -0.28
TNFRSF1B-202ENST00000489921 KCNIP2Q9NS61 270 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 218.6 ms