RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 S100A4P26447 101 aaKnown RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 HLA-DMBP28068 263 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 BRS3P32247 399 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 RPL22P35268 128 aaKnown RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 ZNF93P35789 620 aaPredicted RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 SRP14P37108 136 aaKnown RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 CSN1S1P47710 185 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 ZNF80P51504 273 aaPredicted RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 FOXA3P55318 350 aaPredicted RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 YPEL3P61236 119 aaPredicted RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 UBA52P62987 128 aaKnown RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 UBE2BP63146 152 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 EIF5AP63241 154 aaKnown RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 HBBP68871 147 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 CCL20P78556 96 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 QRFPP83859 136 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 RHOGP84095 191 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 PLGLB1Q02325 96 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 CATR1Q13166 79 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 DIAPH2-AS1Q14236 149 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 C1orf140Q5VVS0 124 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 RPL22L1Q6P5R6 122 aaKnown RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 IZUMO2Q6UXV1 221 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 GKN2Q86XP6 184 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 BPIFA4PQ86YQ2 179 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 C5orf17Q8NAS9 161 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 WFDC11Q8NEX6 87 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 OR8D4Q8NGM9 314 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 OR10AC1Q8NH08 325 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 STAG3L4Q8TBR4 150 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 H1FXQ92522 213 aaKnown RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 PRELID3AQ96N28 172 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 CIB3Q96Q77 187 aaPredicted RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 SDF2Q99470 211 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 SNRNP25Q9BV90 132 aaKnown RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 SPANXDQ9BXN6 97 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 TMEM191AQ9H0A3 160 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 TMEM133Q9H2Q1 129 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 PRO1933Q9H354 126 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 RNF122Q9H9V4 155 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 SLC39A9Q9NUM3 307 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 FKBP11Q9NYL4 201 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 TAS2R8Q9NYW2 309 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 IL36BQ9NZH7 164 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 CCDC167Q9P0B6 97 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 COMMD3Q9UBI1 195 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 RNF11Q9Y3C5 154 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 IER3IP1Q9Y5U9 82 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 DSPPQ9NZW4 1301 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 KTN1Q86UP2 1357 aaKnown RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 ANKRD36BQ8N2N9 1353 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 TMEM2Q9UHN6 1383 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 ARHGAP31Q2M1Z3 1444 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 CEP162Q5TB80 1403 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 NSD3Q9BZ95 1437 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 TRAPPC8Q9Y2L5 1435 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 CAMSAP2Q08AD1 1489 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 GRIN2AQ12879 1464 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 CCDC18Q5T9S5 1454 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 NEO1Q92859 1461 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 MAGI1Q96QZ7 1491 aaPredicted RBP0.54□□□□□ -2.32
CCDC39-206ENST00000489868 MBD5Q9P267 1494 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 EXPH5Q8NEV8 1989 aa0.54□□□□□ -2.32
CCDC39-206ENST00000489868 EIF4G3O43432 1585 aaKnown RBP0.53□□□□□ -2.32
CCDC39-206ENST00000489868 WDR97A6NE52 1622 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 RP1P56715 2156 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 RIMS1Q86UR5 1692 aaKnown RBP0.53□□□□□ -2.32
CCDC39-206ENST00000489868 TRGV10A0A0A0MS01 117 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.53□□□□□ -2.32
CCDC39-206ENST00000489868 TRBV27A0A0K0K1C4 114 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 ZNF727A8MUV8 499 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 BUB1B-PAK6H3BSN5 160 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 UQCRQO14949 82 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 RER1O15258 196 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 HIST1H2BKO60814 126 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 KLF7O75840 302 aaPredicted RBP0.53□□□□□ -2.32
CCDC39-206ENST00000489868 TNFP01375 233 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 HBDP02042 147 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 SLC25A5P05141 298 aaKnown RBP0.53□□□□□ -2.32
CCDC39-206ENST00000489868 HIST1H2BJP06899 126 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 LINC00032P0C843 101 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 IFITM1P13164 125 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 HLA-DRB4P13762 266 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 DYNLT3P51808 116 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 ARPP19P56211 112 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 SNRPD3P62318 126 aaKnown RBP0.53□□□□□ -2.32
CCDC39-206ENST00000489868 BTG2P78543 158 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 ZNF345Q14585 488 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 ZNF846Q147U1 533 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 LINC01554Q52M75 96 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 PYY3Q5JQD4 70 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 CLLU1Q5K131 121 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 C6orf52Q5T4I8 152 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 C9orf153Q5TBE3 101 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 EIF5AL1Q6IS14 154 aaKnown RBP0.53□□□□□ -2.32
CCDC39-206ENST00000489868 MRPL54Q6P161 138 aaKnown RBP0.53□□□□□ -2.32
CCDC39-206ENST00000489868 C22orf39Q6P5X5 142 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 TMEM91Q6ZNR0 172 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 FOXI2Q6ZQN5 318 aa0.53□□□□□ -2.32
CCDC39-206ENST00000489868 MIR17HGQ75NE6 70 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms