RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 EFNA4P52798 201 aa7.76□□□□□ -1.17
NOD1-208ENST00000489614 HBBP68871 147 aa7.76□□□□□ -1.17
NOD1-208ENST00000489614 CCL17Q92583 94 aa7.76□□□□□ -1.17
NOD1-208ENST00000489614 LIN7CQ9NUP9 197 aaKnown RBP7.76□□□□□ -1.17
NOD1-208ENST00000489614 RPUSD1Q9UJJ7 312 aaKnown RBP7.76□□□□□ -1.17
NOD1-208ENST00000489614 AGRNO00468 2067 aa7.76□□□□□ -1.17
NOD1-208ENST00000489614 C15orf62A8K5M9 175 aa7.76□□□□□ -1.17
NOD1-208ENST00000489614 DRAM1Q8N682 238 aa7.76□□□□□ -1.17
NOD1-208ENST00000489614 OR1L8Q8NGR8 309 aa7.76□□□□□ -1.17
NOD1-208ENST00000489614 PRSS3P2Q8NHM4 247 aa7.76□□□□□ -1.17
NOD1-208ENST00000489614 CHAC1Q9BUX1 264 aa7.76□□□□□ -1.17
NOD1-208ENST00000489614 ZFHX3Q15911 3703 aa7.76□□□□□ -1.17
NOD1-208ENST00000489614 TET2Q6N021 2002 aaPredicted RBP7.76□□□□□ -1.17
NOD1-208ENST00000489614 RASL11AQ6T310 242 aa7.75□□□□□ -1.17
NOD1-208ENST00000489614 SLC25A48Q6ZT89 311 aaKnown RBP7.75□□□□□ -1.17
NOD1-208ENST00000489614 ABCA2Q9BZC7 2435 aa7.75□□□□□ -1.17
NOD1-208ENST00000489614 TRAV25A0A0B4J276 109 aa7.75□□□□□ -1.17
NOD1-208ENST00000489614 FAM90A26D6RGX4 464 aa7.75□□□□□ -1.17
NOD1-208ENST00000489614 AREGP15514 252 aa7.75□□□□□ -1.17
NOD1-208ENST00000489614 SMCPP49901 116 aaPredicted RBP7.75□□□□□ -1.17
NOD1-208ENST00000489614 TRAV4A0A0B4J268 109 aa7.75□□□□□ -1.17
NOD1-208ENST00000489614 IGHV4-39P01824 125 aa7.75□□□□□ -1.17
NOD1-208ENST00000489614 LOXL1Q08397 574 aaPredicted RBP7.75□□□□□ -1.17
NOD1-208ENST00000489614 ABHD12Q8N2K0 398 aa7.75□□□□□ -1.17
NOD1-208ENST00000489614 RAB9BQ9NP90 201 aa7.75□□□□□ -1.17
NOD1-208ENST00000489614 CR1P17927 2039 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 USP9YO00507 2555 aaPredicted RBP7.74□□□□□ -1.17
NOD1-208ENST00000489614 A0A096LNT2 108 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 IGKV2D-26A0A0A0MRZ7 120 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 SPINT2O43291 252 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 LY6HO94772 140 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 TGFAP01135 160 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 IFITM1P13164 125 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 RPL30P62888 115 aaKnown RBP7.74□□□□□ -1.17
NOD1-208ENST00000489614 ZNF833PQ6ZTB9 187 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 H2BFWTQ7Z2G1 175 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 CSMD2Q7Z408 3487 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 PIGBOS1A0A0B4J2F0 54 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 H3BVH4 76 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 EDDM3AQ14507 147 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 C12orf74Q32Q52 190 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 DEFB108BQ8NET1 73 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 CARD19Q96LW7 228 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 MAP1LC3AQ9H492 121 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 DKK2Q9UBU2 259 aa7.74□□□□□ -1.17
NOD1-208ENST00000489614 NDUFS7O75251 213 aa7.73□□□□□ -1.17
NOD1-208ENST00000489614 CRLF1O75462 422 aa7.73□□□□□ -1.17
NOD1-208ENST00000489614 LOC107984156A0A0G2JMH3 177 aa7.73□□□□□ -1.17
NOD1-208ENST00000489614 LINC00473A8K010 186 aa7.73□□□□□ -1.17
NOD1-208ENST00000489614 RHODO00212 210 aa7.73□□□□□ -1.17
NOD1-208ENST00000489614 NDUFB3O43676 98 aa7.73□□□□□ -1.17
NOD1-208ENST00000489614 PSMB2P49721 201 aa7.73□□□□□ -1.17
NOD1-208ENST00000489614 HCP5Q6MZN7 132 aa7.73□□□□□ -1.17
NOD1-208ENST00000489614 ARL17AQ8IVW1 177 aa7.73□□□□□ -1.17
NOD1-208ENST00000489614 IGF2BP2-AS1Q96M15 143 aa7.73□□□□□ -1.17
NOD1-208ENST00000489614 ZNF714Q96N38 554 aa7.73□□□□□ -1.17
NOD1-208ENST00000489614 CELSR2Q9HCU4 2923 aa7.73□□□□□ -1.17
NOD1-208ENST00000489614 LY6LH3BQJ8 138 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 SNCGO76070 127 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 DUTP33316 252 aaKnown RBP7.72□□□□□ -1.17
NOD1-208ENST00000489614 LMO4P61968 165 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 HIST2H2BCQ6DN03 193 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 Q6ZQT7 251 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 CEND1Q8N111 149 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 SOX21Q9Y651 276 aaPredicted RBP7.72□□□□□ -1.17
NOD1-208ENST00000489614 ASH1LQ9NR48 2969 aaKnown RBP7.72□□□□□ -1.17
NOD1-208ENST00000489614 ZNF469Q96JG9 3925 aaPredicted RBP7.72□□□□□ -1.17
NOD1-208ENST00000489614 ZNF414Q96IQ9 312 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 PSMG3-AS1Q96PY0 264 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 ENY2Q9NPA8 101 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 A0A1B0GXF2 115 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 IGLV1-47P01700 117 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 LINC00694P0DN24 101 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 IGHV1-8P0DP01 117 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 COL8A1P27658 744 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 NRGNQ92686 78 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 TCF19Q9Y242 345 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 SETXQ7Z333 2677 aaKnown RBP7.72□□□□□ -1.17
NOD1-208ENST00000489614 CREBBPQ92793 2442 aa7.72□□□□□ -1.17
NOD1-208ENST00000489614 TRBV25-1A0A075B6N4 114 aa7.71□□□□□ -1.17
NOD1-208ENST00000489614 IGHV3-43A0A0B4J1X8 118 aa7.71□□□□□ -1.17
NOD1-208ENST00000489614 SMIM9A6NGZ8 99 aa7.71□□□□□ -1.17
NOD1-208ENST00000489614 IGHV3-43DP0DP04 118 aa7.71□□□□□ -1.17
NOD1-208ENST00000489614 CCL3L1P16619 93 aa7.71□□□□□ -1.17
NOD1-208ENST00000489614 IFI27P40305 119 aaPredicted RBP7.71□□□□□ -1.17
NOD1-208ENST00000489614 SRSF9Q13242 221 aaKnown RBP eCLIP7.71□□□□□ -1.17
NOD1-208ENST00000489614 MED13LQ71F56 2210 aa7.71□□□□□ -1.18
NOD1-208ENST00000489614 ODF3BA8MYP8 253 aa7.71□□□□□ -1.18
NOD1-208ENST00000489614 RPL7P18124 248 aaKnown RBP7.71□□□□□ -1.18
NOD1-208ENST00000489614 RFESDQ8TAC1 157 aa7.71□□□□□ -1.18
NOD1-208ENST00000489614 C10orf105Q8TEF2 133 aa7.71□□□□□ -1.18
NOD1-208ENST00000489614 PDZD2O15018 2839 aa7.7□□□□□ -1.18
NOD1-208ENST00000489614 CENPVL3A0A0U1RRI6 287 aa7.7□□□□□ -1.18
NOD1-208ENST00000489614 FAM90A9PA6NNJ1 464 aa7.7□□□□□ -1.18
NOD1-208ENST00000489614 SAA2P0DJI9 122 aaPredicted RBP7.7□□□□□ -1.18
NOD1-208ENST00000489614 POU2AF1Q16633 256 aa7.7□□□□□ -1.18
NOD1-208ENST00000489614 RRN3P1Q2M238 152 aa7.7□□□□□ -1.18
NOD1-208ENST00000489614 CFAP126Q5VTH2 177 aa7.7□□□□□ -1.18
NOD1-208ENST00000489614 GTSCR1Q86UQ5 136 aa7.7□□□□□ -1.18
NOD1-208ENST00000489614 PPDPFLQ8WWR9 84 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms