RNA–Protein interactions for RNA: ENST00000489300.1

CDK11A-218, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-218ENST00000489300 ODF3Q96PU9 254 aa12.74□□□□□ -0.37
CDK11A-218ENST00000489300 SLC35B3Q9H1N7 401 aa12.74□□□□□ -0.37
CDK11A-218ENST00000489300 M0R3E3 92 aa12.73□□□□□ -0.37
CDK11A-218ENST00000489300 PEA15Q15121 130 aa12.73□□□□□ -0.37
CDK11A-218ENST00000489300 CSNK1G2-AS1Q8NCQ2 148 aa12.73□□□□□ -0.37
CDK11A-218ENST00000489300 SFT2D1Q8WV19 159 aa12.73□□□□□ -0.37
CDK11A-218ENST00000489300 NKX6-2Q9C056 277 aaPredicted RBP12.73□□□□□ -0.37
CDK11A-218ENST00000489300 RBAKDNA6NC62 111 aa12.72□□□□□ -0.37
CDK11A-218ENST00000489300 PRAC2D3DTV9 90 aa12.72□□□□□ -0.37
CDK11A-218ENST00000489300 NPIPB6E9PJ23 425 aa12.72□□□□□ -0.37
CDK11A-218ENST00000489300 K7EQM0 130 aa12.72□□□□□ -0.37
CDK11A-218ENST00000489300 SLC25A5P05141 298 aaKnown RBP12.72□□□□□ -0.37
CDK11A-218ENST00000489300 SPINK13Q1W4C9 94 aa12.72□□□□□ -0.37
CDK11A-218ENST00000489300 AMTNQ6UX39 209 aa12.72□□□□□ -0.37
CDK11A-218ENST00000489300 TMEM256Q8N2U0 113 aa12.72□□□□□ -0.37
CDK11A-218ENST00000489300 SUN5Q8TC36 379 aa12.72□□□□□ -0.37
CDK11A-218ENST00000489300 EDA2RQ9HAV5 297 aa12.72□□□□□ -0.37
CDK11A-218ENST00000489300 A0A1B0GV50 99 aa12.71□□□□□ -0.37
CDK11A-218ENST00000489300 SERTM2A0A1B0GWG4 89 aa12.71□□□□□ -0.37
CDK11A-218ENST00000489300 MAP1LC3B2A6NCE7 125 aa12.71□□□□□ -0.37
CDK11A-218ENST00000489300 EIF3GO75821 320 aaKnown RBP eCLIP12.71□□□□□ -0.37
CDK11A-218ENST00000489300 C9orf47Q6ZRZ4 202 aa12.71□□□□□ -0.37
CDK11A-218ENST00000489300 NEU1Q99519 415 aa12.71□□□□□ -0.37
CDK11A-218ENST00000489300 C20orf144Q9BQM9 153 aa12.71□□□□□ -0.37
CDK11A-218ENST00000489300 MAP1LC3BQ9GZQ8 125 aa12.71□□□□□ -0.37
CDK11A-218ENST00000489300 EIF5A2Q9GZV4 153 aaKnown RBP12.71□□□□□ -0.37
CDK11A-218ENST00000489300 C11orf68Q9H3H3 251 aaKnown RBP12.71□□□□□ -0.37
CDK11A-218ENST00000489300 IGHV3OR16-12A0A075B7B8 117 aa12.7□□□□□ -0.38
CDK11A-218ENST00000489300 A0A1W2PRE2 83 aa12.7□□□□□ -0.38
CDK11A-218ENST00000489300 TMEM189A5PLL7 270 aa12.7□□□□□ -0.38
CDK11A-218ENST00000489300 C3orf84H3BNL1 204 aa12.7□□□□□ -0.38
CDK11A-218ENST00000489300 M0R2Z0 102 aa12.7□□□□□ -0.38
CDK11A-218ENST00000489300 MBD3L1Q8WWY6 194 aa12.7□□□□□ -0.38
CDK11A-218ENST00000489300 TRAV1-1A0A0B4J248 108 aa12.69□□□□□ -0.38
CDK11A-218ENST00000489300 TRBV7-9A0A0J9YWB2 115 aa12.69□□□□□ -0.38
CDK11A-218ENST00000489300 A0A0J9YWU9 116 aa12.69□□□□□ -0.38
CDK11A-218ENST00000489300 TMEM218A2RU14 115 aa12.69□□□□□ -0.38
CDK11A-218ENST00000489300 DIRC3C9JPN6 131 aa12.69□□□□□ -0.38
CDK11A-218ENST00000489300 PPT1P50897 306 aa12.69□□□□□ -0.38
CDK11A-218ENST00000489300 ZNF705AQ6ZN79 300 aaPredicted RBP12.69□□□□□ -0.38
CDK11A-218ENST00000489300 CCDC28AQ8IWP9 274 aa12.69□□□□□ -0.38
CDK11A-218ENST00000489300 MUC7Q8TAX7 377 aa12.69□□□□□ -0.38
CDK11A-218ENST00000489300 IFNA1P01562 189 aa12.68□□□□□ -0.38
CDK11A-218ENST00000489300 CT45A10P0DMU9 189 aa12.68□□□□□ -0.38
CDK11A-218ENST00000489300 ZNF138P52744 262 aa12.68□□□□□ -0.38
CDK11A-218ENST00000489300 ZNF726P1Q15940 193 aa12.68□□□□□ -0.38
CDK11A-218ENST00000489300 RRN3P1Q2M238 152 aa12.68□□□□□ -0.38
CDK11A-218ENST00000489300 C5orf17Q8NAS9 161 aa12.68□□□□□ -0.38
CDK11A-218ENST00000489300 LINC01587Q99440 93 aa12.68□□□□□ -0.38
CDK11A-218ENST00000489300 NIPSNAP3BQ9BS92 247 aa12.68□□□□□ -0.38
CDK11A-218ENST00000489300 AGPAT4-IT1Q9H0P7 198 aa12.68□□□□□ -0.38
CDK11A-218ENST00000489300 TRAV12-2A0A075B6T6 113 aa12.67□□□□□ -0.38
CDK11A-218ENST00000489300 FBLL1A6NHQ2 334 aaKnown RBP12.67□□□□□ -0.38
CDK11A-218ENST00000489300 F8W036 122 aa12.67□□□□□ -0.38
CDK11A-218ENST00000489300 FGF8P55075 233 aaPredicted RBP12.67□□□□□ -0.38
CDK11A-218ENST00000489300 ERCC8Q13216 396 aa12.67□□□□□ -0.38
CDK11A-218ENST00000489300 SMDT1Q9H4I9 107 aa12.67□□□□□ -0.38
CDK11A-218ENST00000489300 RPH3ALQ9UNE2 315 aa12.67□□□□□ -0.38
CDK11A-218ENST00000489300 LENEPQ9Y5L5 61 aa12.67□□□□□ -0.38
CDK11A-218ENST00000489300 NBEAL2Q6ZNJ1 2754 aa12.66□□□□□ -0.38
CDK11A-218ENST00000489300 IGKV2-40A0A087WW87 121 aaPredicted RBP12.66□□□□□ -0.38
CDK11A-218ENST00000489300 IGHV4-28A0A0C4DH34 117 aa12.66□□□□□ -0.38
CDK11A-218ENST00000489300 RBFOX3A6NFN3 312 aa12.66□□□□□ -0.38
CDK11A-218ENST00000489300 H7BYZ3 331 aa12.66□□□□□ -0.38
CDK11A-218ENST00000489300 IGKV2D-40P01614 121 aaPredicted RBP12.66□□□□□ -0.38
CDK11A-218ENST00000489300 APOC3P02656 99 aa12.66□□□□□ -0.38
CDK11A-218ENST00000489300 GPX1P07203 203 aa12.66□□□□□ -0.38
CDK11A-218ENST00000489300 SUMO1P63165 101 aaKnown RBP12.66□□□□□ -0.38
CDK11A-218ENST00000489300 SRSF3P84103 164 aaKnown RBP12.66□□□□□ -0.38
CDK11A-218ENST00000489300 SSX7Q7RTT5 188 aa12.66□□□□□ -0.38
CDK11A-218ENST00000489300 TCEAL7Q9BRU2 100 aa12.66□□□□□ -0.38
CDK11A-218ENST00000489300 ZNF492Q9P255 531 aa12.66□□□□□ -0.38
CDK11A-218ENST00000489300 ARL2-SNX15V9GYD0 113 aa12.66□□□□□ -0.38
CDK11A-218ENST00000489300 X6R8D5 127 aa12.66□□□□□ -0.38
CDK11A-218ENST00000489300 COL7A1Q02388 2944 aa12.66□□□□□ -0.38
CDK11A-218ENST00000489300 TEX48A0A1B0GUV7 120 aa12.65□□□□□ -0.38
CDK11A-218ENST00000489300 F6UZH7 168 aa12.65□□□□□ -0.38
CDK11A-218ENST00000489300 CRXO43186 299 aaPredicted RBP12.65□□□□□ -0.38
CDK11A-218ENST00000489300 PRB4P10163 310 aaPredicted RBP12.65□□□□□ -0.38
CDK11A-218ENST00000489300 TAS2R60P59551 318 aa12.65□□□□□ -0.38
CDK11A-218ENST00000489300 CCL20P78556 96 aa12.65□□□□□ -0.38
CDK11A-218ENST00000489300 GOLT1AQ6ZVE7 132 aa12.65□□□□□ -0.38
CDK11A-218ENST00000489300 C1orf158Q8N1D5 194 aa12.65□□□□□ -0.38
CDK11A-218ENST00000489300 Q8NAQ8 132 aa12.65□□□□□ -0.38
CDK11A-218ENST00000489300 C11orf45Q8TAV5 145 aa12.65□□□□□ -0.38
CDK11A-218ENST00000489300 VGLL1Q99990 258 aa12.65□□□□□ -0.38
CDK11A-218ENST00000489300 NDFIP1Q9BT67 221 aa12.65□□□□□ -0.38
CDK11A-218ENST00000489300 EPDR1Q9UM22 224 aa12.65□□□□□ -0.38
CDK11A-218ENST00000489300 SFTA3P0C7M3 94 aa12.64□□□□□ -0.39
CDK11A-218ENST00000489300 CRISP2P16562 243 aa12.64□□□□□ -0.39
CDK11A-218ENST00000489300 HIST1H2BAQ96A08 127 aa12.64□□□□□ -0.39
CDK11A-218ENST00000489300 SEC11CQ9BY50 192 aa12.64□□□□□ -0.39
CDK11A-218ENST00000489300 GNG13Q9P2W3 67 aa12.64□□□□□ -0.39
CDK11A-218ENST00000489300 C7orf71A4D174 169 aa12.63□□□□□ -0.39
CDK11A-218ENST00000489300 J3KRW8 73 aa12.63□□□□□ -0.39
CDK11A-218ENST00000489300 TCRAP04437 139 aa12.63□□□□□ -0.39
CDK11A-218ENST00000489300 TAGLN2P37802 199 aaKnown RBP12.63□□□□□ -0.39
CDK11A-218ENST00000489300 UBE2G2P60604 165 aa12.63□□□□□ -0.39
CDK11A-218ENST00000489300 GFI1BQ5VTD9 330 aa12.63□□□□□ -0.39
CDK11A-218ENST00000489300 CST9LP1Q5W188 147 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms